RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 XCL2Q9UBD3 114 aa5.11□□□□□ -1.59
SHQ1-207ENST00000475558 TP53TG1Q9Y2A0 90 aa5.11□□□□□ -1.59
SHQ1-207ENST00000475558 TEX48A0A1B0GUV7 120 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 PHOX2AO14813 284 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 SPINK4O60575 86 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 NXPH4O95158 308 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 GZMBP10144 247 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 RPL35AP18077 110 aaKnown RBP5.1□□□□□ -1.59
SHQ1-207ENST00000475558 G0S2P27469 103 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 Q0VG73 95 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 OR10J3Q5JRS4 329 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 MUC21Q5SSG8 566 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 PRR9Q5T870 116 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 FAM104BQ5XKR9 115 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 MRPL54Q6P161 138 aaKnown RBP5.1□□□□□ -1.59
SHQ1-207ENST00000475558 ZNF705AQ6ZN79 300 aaPredicted RBP5.1□□□□□ -1.59
SHQ1-207ENST00000475558 ZNF575Q86XF7 245 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 C1orf158Q8N1D5 194 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 CSNK1G2-AS1Q8NCQ2 148 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 RASL10AQ92737 203 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 MRAP2Q96G30 205 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 AP1S3Q96PC3 154 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 OVOL2Q9BRP0 275 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 DPH3P1Q9H4G8 78 aa5.1□□□□□ -1.59
SHQ1-207ENST00000475558 TIMM8BQ9Y5J9 83 aaPredicted RBP5.1□□□□□ -1.59
SHQ1-207ENST00000475558 HYDINQ4G0P3 5121 aa5.09□□□□□ -1.59
SHQ1-207ENST00000475558 RBMY1BA6NDE4 496 aaKnown RBP5.09□□□□□ -1.59
SHQ1-207ENST00000475558 RBMY1EA6NEQ0 496 aaKnown RBP5.09□□□□□ -1.59
SHQ1-207ENST00000475558 H7C1H1 209 aa5.09□□□□□ -1.59
SHQ1-207ENST00000475558 RHODO00212 210 aa5.09□□□□□ -1.59
SHQ1-207ENST00000475558 TCAPO15273 167 aa5.09□□□□□ -1.59
SHQ1-207ENST00000475558 RBMY1DP0C7P1 496 aaKnown RBP5.09□□□□□ -1.59
SHQ1-207ENST00000475558 IGHV4-30-4P0DP06 118 aa5.09□□□□□ -1.59
SHQ1-207ENST00000475558 RNASE3P12724 160 aaKnown RBP5.09□□□□□ -1.59
SHQ1-207ENST00000475558 MIFP14174 115 aa5.09□□□□□ -1.59
SHQ1-207ENST00000475558 HTN1P15515 57 aa5.09□□□□□ -1.59
SHQ1-207ENST00000475558 FXYD7P58549 80 aa5.09□□□□□ -1.59
SHQ1-207ENST00000475558 KIR3DS1Q14943 382 aa5.09□□□□□ -1.59
SHQ1-207ENST00000475558 ZNF876PQ49A33 203 aa5.09□□□□□ -1.59
SHQ1-207ENST00000475558 ZFAND6Q6FIF0 208 aa5.09□□□□□ -1.59
SHQ1-207ENST00000475558 ZFP2Q6ZN57 461 aa5.09□□□□□ -1.59
SHQ1-207ENST00000475558 ORMDL3Q8N138 153 aa5.09□□□□□ -1.59
SHQ1-207ENST00000475558 GSN-AS1Q9NRJ2 163 aa5.09□□□□□ -1.59
SHQ1-207ENST00000475558 LINC01549A6NIU2 74 aa5.08□□□□□ -1.6
SHQ1-207ENST00000475558 H3BVH4 76 aa5.08□□□□□ -1.6
SHQ1-207ENST00000475558 K7EMI3 77 aa5.08□□□□□ -1.6
SHQ1-207ENST00000475558 GIG44P09565 113 aaPredicted RBP5.08□□□□□ -1.6
SHQ1-207ENST00000475558 FRMD6-AS1P0C7T7 363 aa5.08□□□□□ -1.6
SHQ1-207ENST00000475558 PRB4P10163 310 aaPredicted RBP5.08□□□□□ -1.6
SHQ1-207ENST00000475558 RAB4AP20338 218 aa5.08□□□□□ -1.6
SHQ1-207ENST00000475558 PMCHP20382 165 aa5.08□□□□□ -1.6
SHQ1-207ENST00000475558 CKS2P33552 79 aa5.08□□□□□ -1.6
SHQ1-207ENST00000475558 SLAQ13239 276 aa5.08□□□□□ -1.6
SHQ1-207ENST00000475558 POM121L12Q8N7R1 296 aa5.08□□□□□ -1.6
SHQ1-207ENST00000475558 RNF183Q96D59 192 aa5.08□□□□□ -1.6
SHQ1-207ENST00000475558 C18orf15Q96N68 181 aa5.08□□□□□ -1.6
SHQ1-207ENST00000475558 KRTAP17-1Q9BYP8 105 aa5.08□□□□□ -1.6
SHQ1-207ENST00000475558 MDFICQ9P1T7 246 aa5.08□□□□□ -1.6
SHQ1-207ENST00000475558 STARD9Q9P2P6 4700 aa5.08□□□□□ -1.6
SHQ1-207ENST00000475558 IGHV3OR16-12A0A075B7B8 117 aa5.07□□□□□ -1.6
SHQ1-207ENST00000475558 LYRM9A8MSI8 78 aa5.07□□□□□ -1.6
SHQ1-207ENST00000475558 M0R381 172 aa5.07□□□□□ -1.6
SHQ1-207ENST00000475558 SPRY2O43597 315 aa5.07□□□□□ -1.6
SHQ1-207ENST00000475558 COA6Q5JTJ3 125 aaKnown RBP5.07□□□□□ -1.6
SHQ1-207ENST00000475558 BAGE3Q86Y29 109 aa5.07□□□□□ -1.6
SHQ1-207ENST00000475558 OR10AG1Q8NH19 301 aa5.07□□□□□ -1.6
SHQ1-207ENST00000475558 RNASE8Q8TDE3 154 aaKnown RBP5.07□□□□□ -1.6
SHQ1-207ENST00000475558 C20orf78Q9BR46 151 aa5.07□□□□□ -1.6
SHQ1-207ENST00000475558 TM2D3Q9BRN9 247 aa5.07□□□□□ -1.6
SHQ1-207ENST00000475558 EDA2RQ9HAV5 297 aa5.07□□□□□ -1.6
SHQ1-207ENST00000475558 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.07□□□□□ -1.6
SHQ1-207ENST00000475558 EIF4EBP3O60516 100 aaPredicted RBP5.06□□□□□ -1.6
SHQ1-207ENST00000475558 AZU1P20160 251 aa5.06□□□□□ -1.6
SHQ1-207ENST00000475558 EVI2AP22794 236 aa5.06□□□□□ -1.6
SHQ1-207ENST00000475558 RPL32P62910 135 aaKnown RBP5.06□□□□□ -1.6
SHQ1-207ENST00000475558 ODF1Q14990 250 aa5.06□□□□□ -1.6
SHQ1-207ENST00000475558 C11orf72Q8NBR9 251 aa5.06□□□□□ -1.6
SHQ1-207ENST00000475558 CHCHD1Q96BP2 118 aaKnown RBP5.06□□□□□ -1.6
SHQ1-207ENST00000475558 DNAJC30Q96LL9 226 aa5.06□□□□□ -1.6
SHQ1-207ENST00000475558 PACRGQ96M98 296 aaPredicted RBP5.06□□□□□ -1.6
SHQ1-207ENST00000475558 ALKBH7Q9BT30 221 aaPredicted RBP5.06□□□□□ -1.6
SHQ1-207ENST00000475558 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
SHQ1-207ENST00000475558 NXT2Q9NPJ8 142 aaKnown RBP5.06□□□□□ -1.6
SHQ1-207ENST00000475558 CSMD3Q7Z407 3707 aa5.06□□□□□ -1.6
SHQ1-207ENST00000475558 TRAV4A0A0B4J268 109 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 F5H697 171 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 VCYO14598 125 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 RS1O15537 224 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 HIST1H2BKO60814 126 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 HIST1H2BJP06899 126 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 LINC00614P0C842 121 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 SPART-AS1P0CW21 52 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 RBMY1A1P0DJD3 496 aaKnown RBP5.05□□□□□ -1.6
SHQ1-207ENST00000475558 RBMY1CP0DJD4 496 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 HOXA5P20719 270 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 HIST1H2BOP23527 126 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 S100A2P29034 98 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 SRIP30626 198 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 HIST1H2BBP33778 126 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 NDUFA6P56556 154 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms