RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 GAGE1Q13065 139 aa11.69□□□□□ -0.54
PCGF3-209ENST00000475288 GAGE4Q13068 117 aa11.69□□□□□ -0.54
PCGF3-209ENST00000475288 GAGE5Q13069 117 aa11.69□□□□□ -0.54
PCGF3-209ENST00000475288 GAGE13Q4V321 117 aa11.69□□□□□ -0.54
PCGF3-209ENST00000475288 SAPCD1Q5SSQ6 148 aa11.69□□□□□ -0.54
PCGF3-209ENST00000475288 UFSP1Q6NVU6 142 aa11.69□□□□□ -0.54
PCGF3-209ENST00000475288 HSD17B11Q8NBQ5 300 aa11.69□□□□□ -0.54
PCGF3-209ENST00000475288 RBFOX3A6NFN3 312 aa11.68□□□□□ -0.54
PCGF3-209ENST00000475288 HMGB3O15347 200 aaKnown RBP11.68□□□□□ -0.54
PCGF3-209ENST00000475288 RAB5CP51148 216 aa11.68□□□□□ -0.54
PCGF3-209ENST00000475288 CHCHD7Q9BUK0 85 aa11.68□□□□□ -0.54
PCGF3-209ENST00000475288 NIT1Q86X76 327 aa11.67□□□□□ -0.54
PCGF3-209ENST00000475288 EPDR1Q9UM22 224 aa11.67□□□□□ -0.54
PCGF3-209ENST00000475288 URGCP-MRPS24S4R325 110 aa11.67□□□□□ -0.54
PCGF3-209ENST00000475288 UBR4Q5T4S7 5183 aa11.67□□□□□ -0.54
PCGF3-209ENST00000475288 RHODO00212 210 aa11.66□□□□□ -0.54
PCGF3-209ENST00000475288 IGLV2-8P01709 118 aa11.66□□□□□ -0.54
PCGF3-209ENST00000475288 MBP02144 154 aa11.66□□□□□ -0.54
PCGF3-209ENST00000475288 GCHFRP30047 84 aa11.66□□□□□ -0.54
PCGF3-209ENST00000475288 SULT1A2P50226 295 aa11.66□□□□□ -0.54
PCGF3-209ENST00000475288 LINC01620Q4KN68 170 aa11.66□□□□□ -0.54
PCGF3-209ENST00000475288 ATRAIDQ6UW56 229 aa11.66□□□□□ -0.54
PCGF3-209ENST00000475288 CIRBP-AS1Q8TBR5 109 aa11.66□□□□□ -0.54
PCGF3-209ENST00000475288 TMEM167BQ9NRX6 74 aa11.66□□□□□ -0.54
PCGF3-209ENST00000475288 IL36BQ9NZH7 164 aa11.66□□□□□ -0.54
PCGF3-209ENST00000475288 IGKV3D-20A0A0C4DH25 116 aa11.65□□□□□ -0.54
PCGF3-209ENST00000475288 S100A4P26447 101 aaKnown RBP11.65□□□□□ -0.54
PCGF3-209ENST00000475288 ASIPP42127 132 aa11.65□□□□□ -0.54
PCGF3-209ENST00000475288 DNLZQ5SXM8 178 aa11.65□□□□□ -0.54
PCGF3-209ENST00000475288 ALKAL2Q6UX46 152 aa11.65□□□□□ -0.54
PCGF3-209ENST00000475288 PRNTQ86SH4 94 aa11.65□□□□□ -0.54
PCGF3-209ENST00000475288 RAB24Q969Q5 203 aa11.65□□□□□ -0.54
PCGF3-209ENST00000475288 SAMD10Q9BYL1 202 aa11.65□□□□□ -0.54
PCGF3-209ENST00000475288 Q9UF83 564 aa11.65□□□□□ -0.54
PCGF3-209ENST00000475288 IGKV2D-24A0A075B6R9 120 aa11.64□□□□□ -0.55
PCGF3-209ENST00000475288 SUMO1P63165 101 aaKnown RBP11.64□□□□□ -0.55
PCGF3-209ENST00000475288 ELOBQ15370 118 aa11.64□□□□□ -0.55
PCGF3-209ENST00000475288 C14orf178Q8N769 122 aaPredicted RBP11.64□□□□□ -0.55
PCGF3-209ENST00000475288 FABP5P3A8MUU1 101 aa11.63□□□□□ -0.55
PCGF3-209ENST00000475288 AKR1C8PQ5T2L2 129 aa11.63□□□□□ -0.55
PCGF3-209ENST00000475288 CXorf1O96002 111 aa11.62□□□□□ -0.55
PCGF3-209ENST00000475288 C14orf177Q52M58 125 aa11.62□□□□□ -0.55
PCGF3-209ENST00000475288 KLK12Q9UKR0 248 aa11.62□□□□□ -0.55
PCGF3-209ENST00000475288 A0A1W2PRE2 83 aa11.61□□□□□ -0.55
PCGF3-209ENST00000475288 Q0VG73 95 aa11.61□□□□□ -0.55
PCGF3-209ENST00000475288 DMRTA1Q5VZB9 504 aa11.61□□□□□ -0.55
PCGF3-209ENST00000475288 DNAJC30Q96LL9 226 aa11.61□□□□□ -0.55
PCGF3-209ENST00000475288 JPT2Q9H910 190 aa11.61□□□□□ -0.55
PCGF3-209ENST00000475288 ARL2-SNX15V9GYD0 113 aa11.61□□□□□ -0.55
PCGF3-209ENST00000475288 A0A087WX48 190 aa11.6□□□□□ -0.55
PCGF3-209ENST00000475288 TRBV10-1A0A0K0K1A3 114 aa11.6□□□□□ -0.55
PCGF3-209ENST00000475288 COX8CQ7Z4L0 72 aa11.6□□□□□ -0.55
PCGF3-209ENST00000475288 UBE2WQ96B02 151 aa11.6□□□□□ -0.55
PCGF3-209ENST00000475288 PLA2G2DQ9UNK4 145 aa11.6□□□□□ -0.55
PCGF3-209ENST00000475288 TRAV1-1A0A0B4J248 108 aa11.59□□□□□ -0.55
PCGF3-209ENST00000475288 B4DEV8 164 aa11.59□□□□□ -0.55
PCGF3-209ENST00000475288 BLOC1S1P78537 153 aa11.59□□□□□ -0.55
PCGF3-209ENST00000475288 CLLU1Q5K131 121 aa11.59□□□□□ -0.55
PCGF3-209ENST00000475288 LYPD6BQ8NI32 183 aa11.59□□□□□ -0.55
PCGF3-209ENST00000475288 KRBOX1C9JBD0 128 aa11.58□□□□□ -0.56
PCGF3-209ENST00000475288 H3BVH4 76 aa11.58□□□□□ -0.56
PCGF3-209ENST00000475288 ARMS2P0C7Q2 107 aa11.58□□□□□ -0.56
PCGF3-209ENST00000475288 KCNIP4Q6PIL6 250 aa11.58□□□□□ -0.56
PCGF3-209ENST00000475288 MBD3L1Q8WWY6 194 aa11.58□□□□□ -0.56
PCGF3-209ENST00000475288 SFRP2Q96HF1 295 aa11.58□□□□□ -0.56
PCGF3-209ENST00000475288 ACTR3CQ9C0K3 210 aaPredicted RBP11.58□□□□□ -0.56
PCGF3-209ENST00000475288 CTXND1A0A1B0GTU2 59 aa11.57□□□□□ -0.56
PCGF3-209ENST00000475288 RAB14P61106 215 aa11.57□□□□□ -0.56
PCGF3-209ENST00000475288 Q86TA4 180 aa11.57□□□□□ -0.56
PCGF3-209ENST00000475288 TRAV34A0A0B4J273 112 aa11.56□□□□□ -0.56
PCGF3-209ENST00000475288 UBE2D3P61077 147 aa11.56□□□□□ -0.56
PCGF3-209ENST00000475288 UBE2D2P62837 147 aa11.56□□□□□ -0.56
PCGF3-209ENST00000475288 RPL36AP83881 106 aaKnown RBP11.56□□□□□ -0.56
PCGF3-209ENST00000475288 ZNF726P1Q15940 193 aa11.56□□□□□ -0.56
PCGF3-209ENST00000475288 FAM74A4Q5TZK3 123 aa11.56□□□□□ -0.56
PCGF3-209ENST00000475288 FAM213BQ8TBF2 198 aa11.56□□□□□ -0.56
PCGF3-209ENST00000475288 RPL36ALQ969Q0 106 aaKnown RBP11.56□□□□□ -0.56
PCGF3-209ENST00000475288 C1orf43Q9BWL3 253 aa11.56□□□□□ -0.56
PCGF3-209ENST00000475288 NKX6-2Q9C056 277 aaPredicted RBP11.56□□□□□ -0.56
PCGF3-209ENST00000475288 TRBV7-3A0A075B6L6 115 aa11.55□□□□□ -0.56
PCGF3-209ENST00000475288 FHITP49789 147 aa11.55□□□□□ -0.56
PCGF3-209ENST00000475288 RPL37AP61513 92 aaKnown RBP11.55□□□□□ -0.56
PCGF3-209ENST00000475288 OR10G8Q8NGN5 311 aa11.55□□□□□ -0.56
PCGF3-209ENST00000475288 HIST1H2BAQ96A08 127 aa11.55□□□□□ -0.56
PCGF3-209ENST00000475288 MED9Q9NWA0 146 aa11.55□□□□□ -0.56
PCGF3-209ENST00000475288 ZFP30Q9Y2G7 519 aa11.55□□□□□ -0.56
PCGF3-209ENST00000475288 PHLDA3Q9Y5J5 127 aa11.55□□□□□ -0.56
PCGF3-209ENST00000475288 TEX46H3BTG2 121 aa11.54□□□□□ -0.56
PCGF3-209ENST00000475288 PEX7O00628 323 aa11.54□□□□□ -0.56
PCGF3-209ENST00000475288 H2AFB1P0C5Y9 115 aa11.54□□□□□ -0.56
PCGF3-209ENST00000475288 CRIP1P50238 77 aa11.54□□□□□ -0.56
PCGF3-209ENST00000475288 ENHOQ6UWT2 76 aa11.54□□□□□ -0.56
PCGF3-209ENST00000475288 ZC2HC1AQ96GY0 325 aa11.54□□□□□ -0.56
PCGF3-209ENST00000475288 A0A087WWL8 130 aa11.53□□□□□ -0.56
PCGF3-209ENST00000475288 MAP1LC3B2A6NCE7 125 aa11.53□□□□□ -0.56
PCGF3-209ENST00000475288 FAM162BQ5T6X4 162 aa11.53□□□□□ -0.56
PCGF3-209ENST00000475288 ZFP82Q8N141 532 aa11.53□□□□□ -0.56
PCGF3-209ENST00000475288 MAP1LC3BQ9GZQ8 125 aa11.53□□□□□ -0.56
PCGF3-209ENST00000475288 TRBV6-8A0A0A6YYG3 113 aa11.52□□□□□ -0.57
PCGF3-209ENST00000475288 M0R036 132 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms