RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, human

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-222	ENST00000474742	HELZ	P42694	1942 aa	Known RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	DENND4C	Q5VZ89	1909 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	DLG5	Q8TDM6	1919 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	MED13	Q9UHV7	2174 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	IGKV3-7	A0A075B6H7	116 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742		A0A087WXM4	84 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	TRBV7-1	A0A0A6YYK4	115 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	TRAV12-3	A0A0B4J271	114 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	IGKV3D-7	A0A0C4DH55	119 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	IGKV3OR2-268	A0A0C4DH90	116 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	TRBV6-5	A0A0K0K1A5	114 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	TRBV30	A0A0K0K1B3	111 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	MUC21	A0A140T8X8	626 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742		A0A1B0GWA3	101 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	TRBV6-4	A0A1B0GX49	114 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	C2orf70	A6NJV1	201 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	ODF3B	A8MYP8	253 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	C16orf90	A8MZG2	172 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	OOSP1	A8MZH6	123 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	IBA57-AS1	B1ANH7	110 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	UMAD1	C9J7I0	102 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742		H3BQF6	201 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	CHKB-CPT1B	H3BT56	60 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	PDCD5	O14737	125 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	NCR3	O14931	201 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	CCL25	O15444	150 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	CCL16	O15467	120 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	LEPROTL1	O95214	131 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	PPP1R17	O96001	155 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	IGHV3-33	P01772	117 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	MGP	P08493	103 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	CCL4	P13236	92 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	CCL5	P13501	91 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	HRES1	P13985	223 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	CSRP1	P21291	193 aa	Known RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	SNRPF	P62306	86 aa	Known RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	RPL38	P63173	70 aa	Known RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	GNGT1	P63211	74 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	SPAG11B	Q08648	103 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	COX17	Q14061	63 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	DEFB113	Q30KQ7	82 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	ZNF791	Q3KP31	576 aa	Predicted RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	ETDB	Q3ZM63	59 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	C9orf116	Q5BN46	136 aa	Predicted RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	C10orf55	Q5SWW7	151 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	SPAG11A	Q6PDA7	123 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	LYPD5	Q6UWN5	251 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	ALKAL2	Q6UX46	152 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	BRD3OS	Q6XYD6	125 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	LINC00322	Q6ZN03	302 aa	Predicted RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742		Q6ZQY7	126 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742		Q6ZS92	163 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	ZNF833P	Q6ZTB9	187 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	FP248	Q71RG6	208 aa	Predicted RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	C6orf201	Q7Z4U5	140 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742		Q86TA4	180 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	BAGE3	Q86Y29	109 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	BAGE2	Q86Y30	109 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	C9orf62	Q8N4C0	152 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	SERP2	Q8N6R1	65 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742		Q8N814	137 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	LINC00304	Q8N9R0	145 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	CCL4L1	Q8NHW4	92 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	LSM10	Q969L4	123 aa	Known RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	ZC2HC1A	Q96GY0	325 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	CARD19	Q96LW7	228 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	C20orf166-AS1	Q96NR2	134 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	PRR15L	Q9BU68	103 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	SNHG12	Q9BXW3	62 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	TTTY12	Q9BZ98	90 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	ST20	Q9HBF5	79 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	PSENEN	Q9NZ42	101 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	LHFPL6	Q9Y693	200 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	SPCS1	Q9Y6A9	102 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	LINC00312	Q9Y6C7	94 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742		R4GN34	69 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	ARHGAP5	Q13017	1502 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	ABCC2	Q92887	1545 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	NISCH	Q9Y2I1	1504 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	DCAF1	Q9Y4B6	1507 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	MAST2	Q6P0Q8	1798 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	ADAMTSL1	Q8N6G6	1762 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	MGAM	O43451	1857 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	HECW1	Q76N89	1606 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	PLIN4	Q96Q06	1357 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	KMT2B	Q9UMN6	2715 aa	Predicted RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	SDK1	Q7Z5N4	2213 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	TNRC6A	Q8NDV7	1962 aa	Known RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	MUC5AC	P98088	5654 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	PXDNL	A1KZ92	1463 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	ABCC10	Q5T3U5	1492 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	TEX14	Q8IWB6	1497 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	IFT140	Q96RY7	1462 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	CDK12	Q9NYV4	1490 aa	Predicted RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	MYO18A	Q92614	2054 aa	Known RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	MYOF	Q9NZM1	2061 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	RERE	Q9P2R6	1566 aa		0.4	□□□□□ -2.34
HDAC9-222	ENST00000474742	ARFGEF3	Q5TH69	2177 aa		0.4	□□□□□ -2.34

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