RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 AKAP14Q86UN6 197 aa13.89□□□□□ -0.19
SNX13-206ENST00000474067 XKRY2A2RUG3 117 aa13.88□□□□□ -0.19
SNX13-206ENST00000474067 GAGE12JA6NER3 117 aa13.88□□□□□ -0.19
SNX13-206ENST00000474067 RPS20P60866 119 aaKnown RBP13.88□□□□□ -0.19
SNX13-206ENST00000474067 GAGE1Q13065 139 aa13.88□□□□□ -0.19
SNX13-206ENST00000474067 GAGE4Q13068 117 aa13.88□□□□□ -0.19
SNX13-206ENST00000474067 GAGE5Q13069 117 aa13.88□□□□□ -0.19
SNX13-206ENST00000474067 GAGE13Q4V321 117 aa13.88□□□□□ -0.19
SNX13-206ENST00000474067 PRR27Q6MZM9 219 aa13.88□□□□□ -0.19
SNX13-206ENST00000474067 UFSP1Q6NVU6 142 aa13.88□□□□□ -0.19
SNX13-206ENST00000474067 URGCP-MRPS24S4R325 110 aa13.88□□□□□ -0.19
SNX13-206ENST00000474067 IBA57-AS1B1ANH7 110 aa13.87□□□□□ -0.19
SNX13-206ENST00000474067 RPL36AP83881 106 aaKnown RBP13.87□□□□□ -0.19
SNX13-206ENST00000474067 MEF2BQ02080 365 aaPredicted RBP13.87□□□□□ -0.19
SNX13-206ENST00000474067 SPANXN1Q5VSR9 72 aa13.87□□□□□ -0.19
SNX13-206ENST00000474067 KCNIP4Q6PIL6 250 aa13.87□□□□□ -0.19
SNX13-206ENST00000474067 Q6ZNX1 250 aa13.87□□□□□ -0.19
SNX13-206ENST00000474067 RPL36ALQ969Q0 106 aaKnown RBP13.87□□□□□ -0.19
SNX13-206ENST00000474067 OR5AL1P0C617 328 aa13.86□□□□□ -0.19
SNX13-206ENST00000474067 SMIM17P0DL12 118 aa13.86□□□□□ -0.19
SNX13-206ENST00000474067 TM2D2Q9BX73 214 aa13.86□□□□□ -0.19
SNX13-206ENST00000474067 GNG4P50150 75 aa13.85□□□□□ -0.19
SNX13-206ENST00000474067 RAB4BP61018 213 aa13.85□□□□□ -0.19
SNX13-206ENST00000474067 CCL20P78556 96 aa13.85□□□□□ -0.19
SNX13-206ENST00000474067 SAMD10Q9BYL1 202 aa13.85□□□□□ -0.19
SNX13-206ENST00000474067 JPT2Q9H910 190 aa13.85□□□□□ -0.19
SNX13-206ENST00000474067 A0A087WWL8 130 aa13.84□□□□□ -0.19
SNX13-206ENST00000474067 SNAI2O43623 268 aa13.84□□□□□ -0.19
SNX13-206ENST00000474067 LINC00694P0DN24 101 aa13.84□□□□□ -0.19
SNX13-206ENST00000474067 VAX2Q9UIW0 290 aa13.84□□□□□ -0.19
SNX13-206ENST00000474067 A0A087WTM6 91 aa13.83□□□□□ -0.2
SNX13-206ENST00000474067 TRAV8-3A0A0A6YYJ7 113 aa13.83□□□□□ -0.2
SNX13-206ENST00000474067 ZNF56Q15929 161 aa13.83□□□□□ -0.2
SNX13-206ENST00000474067 CENPWQ5EE01 88 aa13.83□□□□□ -0.2
SNX13-206ENST00000474067 SSBP4Q9BWG4 385 aaPredicted RBP13.83□□□□□ -0.2
SNX13-206ENST00000474067 COX11Q9Y6N1 276 aa13.83□□□□□ -0.2
SNX13-206ENST00000474067 TRBV7-3A0A075B6L6 115 aa13.82□□□□□ -0.2
SNX13-206ENST00000474067 IGHV3-30P01768 117 aa13.82□□□□□ -0.2
SNX13-206ENST00000474067 IGHV3-33P01772 117 aa13.82□□□□□ -0.2
SNX13-206ENST00000474067 IGHV3-30-3P0DP02 117 aa13.82□□□□□ -0.2
SNX13-206ENST00000474067 IGHV3-30-5P0DP03 117 aa13.82□□□□□ -0.2
SNX13-206ENST00000474067 BCL2P10415 239 aa13.82□□□□□ -0.2
SNX13-206ENST00000474067 ELOBQ15370 118 aa13.82□□□□□ -0.2
SNX13-206ENST00000474067 Q6ZSN1 163 aa13.82□□□□□ -0.2
SNX13-206ENST00000474067 C14orf178Q8N769 122 aaPredicted RBP13.82□□□□□ -0.2
SNX13-206ENST00000474067 RMI2Q96E14 147 aa13.82□□□□□ -0.2
SNX13-206ENST00000474067 AP1S3Q96PC3 154 aa13.82□□□□□ -0.2
SNX13-206ENST00000474067 CHCHD7Q9BUK0 85 aa13.82□□□□□ -0.2
SNX13-206ENST00000474067 MED9Q9NWA0 146 aa13.82□□□□□ -0.2
SNX13-206ENST00000474067 TNFRSF18Q9Y5U5 241 aa13.82□□□□□ -0.2
SNX13-206ENST00000474067 PKIAP61925 76 aa13.81□□□□□ -0.2
SNX13-206ENST00000474067 BLOC1S1P78537 153 aa13.81□□□□□ -0.2
SNX13-206ENST00000474067 TMEM97Q5BJF2 176 aa13.81□□□□□ -0.2
SNX13-206ENST00000474067 PKHD1P08F94 4074 aa13.8□□□□□ -0.2
SNX13-206ENST00000474067 KRTAP10-2P60368 255 aa13.8□□□□□ -0.2
SNX13-206ENST00000474067 RPL19P84098 196 aaKnown RBP13.8□□□□□ -0.2
SNX13-206ENST00000474067 NTN5Q8WTR8 489 aaPredicted RBP13.8□□□□□ -0.2
SNX13-206ENST00000474067 PKD1P98161 4303 aa13.8□□□□□ -0.2
SNX13-206ENST00000474067 P01737 135 aa13.79□□□□□ -0.2
SNX13-206ENST00000474067 CACNG7P62955 275 aa13.79□□□□□ -0.2
SNX13-206ENST00000474067 OR10G8Q8NGN5 311 aa13.79□□□□□ -0.2
SNX13-206ENST00000474067 OR10AG1Q8NH19 301 aa13.79□□□□□ -0.2
SNX13-206ENST00000474067 Q9HAA7 133 aa13.79□□□□□ -0.2
SNX13-206ENST00000474067 A0A087WX48 190 aa13.78□□□□□ -0.2
SNX13-206ENST00000474067 F2Z2F3 143 aa13.78□□□□□ -0.2
SNX13-206ENST00000474067 F5H697 171 aa13.78□□□□□ -0.2
SNX13-206ENST00000474067 H7C1H1 209 aa13.78□□□□□ -0.2
SNX13-206ENST00000474067 FER1L6-AS1Q8NA97 138 aa13.78□□□□□ -0.2
SNX13-206ENST00000474067 OR2D3Q8NGH3 330 aa13.78□□□□□ -0.2
SNX13-206ENST00000474067 DERL1Q9BUN8 251 aa13.78□□□□□ -0.2
SNX13-206ENST00000474067 HERC2O95714 4834 aa13.78□□□□□ -0.2
SNX13-206ENST00000474067 KIAA1109Q2LD37 5005 aa13.76□□□□□ -0.21
SNX13-206ENST00000474067 DNAH11Q96DT5 4516 aa13.76□□□□□ -0.21
SNX13-206ENST00000474067 UBE2D3P61077 147 aa13.76□□□□□ -0.21
SNX13-206ENST00000474067 UBE2D2P62837 147 aa13.76□□□□□ -0.21
SNX13-206ENST00000474067 C9orf62Q8N4C0 152 aa13.76□□□□□ -0.21
SNX13-206ENST00000474067 MAPKAPK5-AS1Q8N8E1 139 aa13.76□□□□□ -0.21
SNX13-206ENST00000474067 RBFOX3A6NFN3 312 aa13.75□□□□□ -0.21
SNX13-206ENST00000474067 TRGC1P0CF51 173 aa13.75□□□□□ -0.21
SNX13-206ENST00000474067 TPPP3Q9BW30 176 aa13.75□□□□□ -0.21
SNX13-206ENST00000474067 hCG_2014768A0A024R1R8 64 aa13.74□□□□□ -0.21
SNX13-206ENST00000474067 C19orf71A6NCJ1 209 aa13.74□□□□□ -0.21
SNX13-206ENST00000474067 DAZ4Q86SG3 579 aaKnown RBP13.74□□□□□ -0.21
SNX13-206ENST00000474067 NIT1Q86X76 327 aa13.74□□□□□ -0.21
SNX13-206ENST00000474067 DAZ3Q9NR90 486 aaKnown RBP13.74□□□□□ -0.21
SNX13-206ENST00000474067 TMEM250H0YL14 139 aa13.73□□□□□ -0.21
SNX13-206ENST00000474067 RAB19A4D1S5 217 aa13.72□□□□□ -0.21
SNX13-206ENST00000474067 IGLV2-8P01709 118 aa13.72□□□□□ -0.21
SNX13-206ENST00000474067 IGLC6P0CF74 106 aa13.72□□□□□ -0.21
SNX13-206ENST00000474067 Q0VG73 95 aa13.72□□□□□ -0.21
SNX13-206ENST00000474067 DNAJC30Q96LL9 226 aa13.72□□□□□ -0.21
SNX13-206ENST00000474067 IGLV5-52A0A0A0MRZ9 124 aa13.71□□□□□ -0.21
SNX13-206ENST00000474067 TRBV6-8A0A0A6YYG3 113 aa13.71□□□□□ -0.21
SNX13-206ENST00000474067 GCSHP23434 173 aa13.71□□□□□ -0.21
SNX13-206ENST00000474067 WDR73Q6P4I2 378 aa13.71□□□□□ -0.21
SNX13-206ENST00000474067 NEXN-AS1Q8NBZ9 246 aa13.71□□□□□ -0.21
SNX13-206ENST00000474067 SSTP61278 116 aa13.7□□□□□ -0.22
SNX13-206ENST00000474067 ALKAL2Q6UX46 152 aa13.7□□□□□ -0.22
SNX13-206ENST00000474067 Q8N1X5 172 aa13.7□□□□□ -0.22
SNX13-206ENST00000474067 Q8N814 137 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms