RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 RPP21Q9H633 154 aaKnown RBP9.51□□□□□ -0.89
USF1-205ENST00000473969 DNAH1Q9P2D7 4330 aa9.51□□□□□ -0.89
USF1-205ENST00000473969 LOC100131303A0A0U1RQF7 123 aa9.5□□□□□ -0.89
USF1-205ENST00000473969 K7EN84 100 aa9.5□□□□□ -0.89
USF1-205ENST00000473969 GATCO43716 136 aaKnown RBP9.5□□□□□ -0.89
USF1-205ENST00000473969 ERVFC1-1P60608 527 aa9.5□□□□□ -0.89
USF1-205ENST00000473969 CACNG7P62955 275 aa9.5□□□□□ -0.89
USF1-205ENST00000473969 FAM74A3Q4VXF1 159 aa9.5□□□□□ -0.89
USF1-205ENST00000473969 SOHLH1Q5JUK2 328 aa9.5□□□□□ -0.89
USF1-205ENST00000473969 SAMD10Q9BYL1 202 aa9.5□□□□□ -0.89
USF1-205ENST00000473969 NXPH4O95158 308 aa9.49□□□□□ -0.89
USF1-205ENST00000473969 ZNF56Q15929 161 aa9.49□□□□□ -0.89
USF1-205ENST00000473969 TTC32Q5I0X7 151 aa9.49□□□□□ -0.89
USF1-205ENST00000473969 AP1S3Q96PC3 154 aa9.49□□□□□ -0.89
USF1-205ENST00000473969 KRTAP17-1Q9BYP8 105 aa9.49□□□□□ -0.89
USF1-205ENST00000473969 NACAE9PAV3 2078 aa9.49□□□□□ -0.89
USF1-205ENST00000473969 NBDYA0A0U1RRE5 68 aa9.48□□□□□ -0.89
USF1-205ENST00000473969 F5H697 171 aa9.48□□□□□ -0.89
USF1-205ENST00000473969 SIVA1O15304 175 aa9.48□□□□□ -0.89
USF1-205ENST00000473969 CRYGDP07320 174 aa9.48□□□□□ -0.89
USF1-205ENST00000473969 IGLC6P0CF74 106 aa9.48□□□□□ -0.89
USF1-205ENST00000473969 TMEM241Q24JQ0 296 aa9.48□□□□□ -0.89
USF1-205ENST00000473969 UFSP1Q6NVU6 142 aa9.48□□□□□ -0.89
USF1-205ENST00000473969 LYZL1Q6UWQ5 148 aa9.48□□□□□ -0.89
USF1-205ENST00000473969 FAM231DQ6ZW35 169 aa9.48□□□□□ -0.89
USF1-205ENST00000473969 ATP6V0E2Q8NHE4 81 aa9.48□□□□□ -0.89
USF1-205ENST00000473969 HYDINQ4G0P3 5121 aa9.48□□□□□ -0.89
USF1-205ENST00000473969 GAGE12JA6NER3 117 aa9.47□□□□□ -0.89
USF1-205ENST00000473969 A8MWL6 223 aa9.47□□□□□ -0.89
USF1-205ENST00000473969 TRGC1P0CF51 173 aa9.47□□□□□ -0.89
USF1-205ENST00000473969 RAB4BP61018 213 aa9.47□□□□□ -0.89
USF1-205ENST00000473969 GAGE1Q13065 139 aa9.47□□□□□ -0.89
USF1-205ENST00000473969 GAGE4Q13068 117 aa9.47□□□□□ -0.89
USF1-205ENST00000473969 GAGE5Q13069 117 aa9.47□□□□□ -0.89
USF1-205ENST00000473969 GAGE13Q4V321 117 aa9.47□□□□□ -0.89
USF1-205ENST00000473969 Q6ZSN1 163 aa9.47□□□□□ -0.89
USF1-205ENST00000473969 LINC01551Q86U37 167 aa9.47□□□□□ -0.89
USF1-205ENST00000473969 C14orf178Q8N769 122 aaPredicted RBP9.47□□□□□ -0.89
USF1-205ENST00000473969 C15orf54Q8N8G6 183 aa9.47□□□□□ -0.89
USF1-205ENST00000473969 TRAV9-2A0A087WT02 112 aa9.46□□□□□ -0.9
USF1-205ENST00000473969 TRAV8-6A0A0B4J262 113 aa9.46□□□□□ -0.9
USF1-205ENST00000473969 RPL36AP83881 106 aaKnown RBP9.46□□□□□ -0.9
USF1-205ENST00000473969 C1orf134Q5TEV5 83 aa9.46□□□□□ -0.9
USF1-205ENST00000473969 WDR73Q6P4I2 378 aa9.46□□□□□ -0.9
USF1-205ENST00000473969 Q6ZR54 194 aa9.46□□□□□ -0.9
USF1-205ENST00000473969 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.46□□□□□ -0.9
USF1-205ENST00000473969 RPL36ALQ969Q0 106 aaKnown RBP9.46□□□□□ -0.9
USF1-205ENST00000473969 BORCS7Q96B45 105 aa9.46□□□□□ -0.9
USF1-205ENST00000473969 NAT8Q9UHE5 227 aa9.46□□□□□ -0.9
USF1-205ENST00000473969 TRBV10-1A0A0K0K1A3 114 aa9.45□□□□□ -0.9
USF1-205ENST00000473969 NTF3P20783 257 aa9.45□□□□□ -0.9
USF1-205ENST00000473969 TIRAPP58753 221 aa9.45□□□□□ -0.9
USF1-205ENST00000473969 SRSF3P84103 164 aaKnown RBP9.45□□□□□ -0.9
USF1-205ENST00000473969 TWIST1Q15672 202 aa9.45□□□□□ -0.9
USF1-205ENST00000473969 ADIRFQ15847 76 aa9.45□□□□□ -0.9
USF1-205ENST00000473969 LINC00336Q6ZUF6 198 aa9.45□□□□□ -0.9
USF1-205ENST00000473969 SMIM15Q7Z3B0 74 aa9.45□□□□□ -0.9
USF1-205ENST00000473969 GTSF1LQ9H1H1 148 aa9.45□□□□□ -0.9
USF1-205ENST00000473969 VPS13DQ5THJ4 4388 aa9.45□□□□□ -0.9
USF1-205ENST00000473969 MGPP08493 103 aa9.44□□□□□ -0.9
USF1-205ENST00000473969 EVI2AP22794 236 aa9.44□□□□□ -0.9
USF1-205ENST00000473969 CT83Q5H943 113 aa9.44□□□□□ -0.9
USF1-205ENST00000473969 OR10J3Q5JRS4 329 aa9.44□□□□□ -0.9
USF1-205ENST00000473969 OSTCQ9NRP0 149 aa9.44□□□□□ -0.9
USF1-205ENST00000473969 KMT2AQ03164 3969 aa9.43□□□□□ -0.9
USF1-205ENST00000473969 C9JQL5 133 aa9.43□□□□□ -0.9
USF1-205ENST00000473969 H7C1H1 209 aa9.43□□□□□ -0.9
USF1-205ENST00000473969 CTRLP40313 264 aa9.43□□□□□ -0.9
USF1-205ENST00000473969 CLLU1Q5K131 121 aa9.43□□□□□ -0.9
USF1-205ENST00000473969 LELP1Q5T871 98 aa9.43□□□□□ -0.9
USF1-205ENST00000473969 C6orf223Q8N319 242 aa9.43□□□□□ -0.9
USF1-205ENST00000473969 MSRB1Q9NZV6 116 aa9.43□□□□□ -0.9
USF1-205ENST00000473969 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
USF1-205ENST00000473969 A0A087WWC5 75 aa9.42□□□□□ -0.9
USF1-205ENST00000473969 RPL23P62829 140 aaKnown RBP9.42□□□□□ -0.9
USF1-205ENST00000473969 TSKUQ8WUA8 353 aa9.42□□□□□ -0.9
USF1-205ENST00000473969 ISOC2Q96AB3 205 aa9.42□□□□□ -0.9
USF1-205ENST00000473969 PGLYRP4Q96LB8 373 aa9.42□□□□□ -0.9
USF1-205ENST00000473969 DPH3P1Q9H4G8 78 aa9.42□□□□□ -0.9
USF1-205ENST00000473969 IGHV3-38A0A0C4DH36 116 aa9.41□□□□□ -0.9
USF1-205ENST00000473969 K7EP13 123 aa9.41□□□□□ -0.9
USF1-205ENST00000473969 WFDC10BQ8IUB3 73 aa9.41□□□□□ -0.9
USF1-205ENST00000473969 OR10G8Q8NGN5 311 aa9.41□□□□□ -0.9
USF1-205ENST00000473969 GFRA4Q9GZZ7 299 aa9.41□□□□□ -0.9
USF1-205ENST00000473969 FAM231BA6NCW3 169 aa9.4□□□□□ -0.9
USF1-205ENST00000473969 PRSS29PA6NIE9 313 aa9.4□□□□□ -0.9
USF1-205ENST00000473969 BTF3P20290 206 aaKnown RBP9.4□□□□□ -0.9
USF1-205ENST00000473969 C10orf126Q8N4M7 172 aa9.4□□□□□ -0.9
USF1-205ENST00000473969 GTSF1Q8WW33 167 aa9.4□□□□□ -0.9
USF1-205ENST00000473969 CNFNQ9BYD5 112 aa9.4□□□□□ -0.9
USF1-205ENST00000473969 TNFRSF18Q9Y5U5 241 aa9.4□□□□□ -0.9
USF1-205ENST00000473969 KIF25-AS1Q9Y6Z4 181 aa9.4□□□□□ -0.9
USF1-205ENST00000473969 HIGD1CA8MV81 97 aa9.39□□□□□ -0.91
USF1-205ENST00000473969 FOXA3P55318 350 aaPredicted RBP9.39□□□□□ -0.91
USF1-205ENST00000473969 NEXN-AS1Q8NBZ9 246 aa9.39□□□□□ -0.91
USF1-205ENST00000473969 DNAJC30Q96LL9 226 aa9.39□□□□□ -0.91
USF1-205ENST00000473969 Q9UF83 564 aa9.39□□□□□ -0.91
USF1-205ENST00000473969 A0A1B0GUT8 65 aa9.38□□□□□ -0.91
USF1-205ENST00000473969 RTL8CO15255 209 aa9.38□□□□□ -0.91
USF1-205ENST00000473969 DNAH10OSP0CZ25 163 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms