RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 TRAV41A0A0B4J266 112 aa10.62□□□□□ -0.71
ABCF3-210ENST00000473311 LMO4P61968 165 aa10.62□□□□□ -0.71
ABCF3-210ENST00000473311 C9orf139Q6ZV77 190 aa10.62□□□□□ -0.71
ABCF3-210ENST00000473311 C20orf173Q96LM9 149 aa10.62□□□□□ -0.71
ABCF3-210ENST00000473311 SMIM2Q9BVW6 85 aa10.62□□□□□ -0.71
ABCF3-210ENST00000473311 S100A4P26447 101 aaKnown RBP10.61□□□□□ -0.71
ABCF3-210ENST00000473311 DEFB1P60022 68 aa10.6□□□□□ -0.71
ABCF3-210ENST00000473311 MOB4Q9Y3A3 225 aa10.6□□□□□ -0.71
ABCF3-210ENST00000473311 A0A1B0GX51 115 aa10.6□□□□□ -0.71
ABCF3-210ENST00000473311 J3KT08 172 aa10.6□□□□□ -0.71
ABCF3-210ENST00000473311 TCL1BO95988 128 aa10.6□□□□□ -0.71
ABCF3-210ENST00000473311 UCNP55089 124 aa10.6□□□□□ -0.71
ABCF3-210ENST00000473311 UNQ9165/PRO28630Q6UXU0 137 aa10.6□□□□□ -0.71
ABCF3-210ENST00000473311 LENEPQ9Y5L5 61 aa10.6□□□□□ -0.71
ABCF3-210ENST00000473311 A4D1N5 150 aa10.59□□□□□ -0.71
ABCF3-210ENST00000473311 FAM223BA6NKX1 122 aa10.59□□□□□ -0.71
ABCF3-210ENST00000473311 SLC25A20O43772 301 aa10.59□□□□□ -0.71
ABCF3-210ENST00000473311 ZFP2Q6ZN57 461 aa10.59□□□□□ -0.71
ABCF3-210ENST00000473311 FAM223AQ8IWN6 122 aa10.59□□□□□ -0.71
ABCF3-210ENST00000473311 ITLN2Q8WWU7 325 aaPredicted RBP10.59□□□□□ -0.71
ABCF3-210ENST00000473311 TRBV12-3P01733 135 aa10.59□□□□□ -0.71
ABCF3-210ENST00000473311 RPL11P62913 178 aaKnown RBP10.59□□□□□ -0.71
ABCF3-210ENST00000473311 OR13C6PQ8NH95 151 aa10.59□□□□□ -0.71
ABCF3-210ENST00000473311 LINC00477Q96M19 166 aa10.59□□□□□ -0.71
ABCF3-210ENST00000473311 SCGB3A1Q96QR1 104 aa10.59□□□□□ -0.71
ABCF3-210ENST00000473311 CELSR1Q9NYQ6 3014 aa10.59□□□□□ -0.71
ABCF3-210ENST00000473311 PHLDA3Q9Y5J5 127 aa10.59□□□□□ -0.71
ABCF3-210ENST00000473311 TRAV21A0A0B4J279 112 aa10.58□□□□□ -0.72
ABCF3-210ENST00000473311 F8VRH5 84 aa10.58□□□□□ -0.72
ABCF3-210ENST00000473311 H7C1H1 209 aa10.58□□□□□ -0.72
ABCF3-210ENST00000473311 SUMO2P61956 95 aaKnown RBP10.58□□□□□ -0.72
ABCF3-210ENST00000473311 ORMDL2Q53FV1 153 aa10.58□□□□□ -0.72
ABCF3-210ENST00000473311 ZFAND2AQ8N6M9 145 aa10.58□□□□□ -0.72
ABCF3-210ENST00000473311 C14orf178Q8N769 122 aaPredicted RBP10.58□□□□□ -0.72
ABCF3-210ENST00000473311 IGKV3-7A0A075B6H7 116 aa10.58□□□□□ -0.72
ABCF3-210ENST00000473311 CRLF1O75462 422 aa10.58□□□□□ -0.72
ABCF3-210ENST00000473311 DUSP14O95147 198 aaKnown RBP10.58□□□□□ -0.72
ABCF3-210ENST00000473311 MGPP08493 103 aa10.58□□□□□ -0.72
ABCF3-210ENST00000473311 RPL39LQ96EH5 51 aaKnown RBP10.58□□□□□ -0.72
ABCF3-210ENST00000473311 LINC01587Q99440 93 aa10.58□□□□□ -0.72
ABCF3-210ENST00000473311 TRAV8-4A0A0B4J246 113 aa10.57□□□□□ -0.72
ABCF3-210ENST00000473311 BRD3OSQ6XYD6 125 aa10.57□□□□□ -0.72
ABCF3-210ENST00000473311 GPHB5Q86YW7 130 aa10.57□□□□□ -0.72
ABCF3-210ENST00000473311 C15orf53Q8NAA6 179 aa10.57□□□□□ -0.72
ABCF3-210ENST00000473311 LINC01600Q96MT4 127 aa10.57□□□□□ -0.72
ABCF3-210ENST00000473311 DPH3P1Q9H4G8 78 aa10.57□□□□□ -0.72
ABCF3-210ENST00000473311 SPTAN1Q13813 2472 aaKnown RBP10.57□□□□□ -0.72
ABCF3-210ENST00000473311 TRAV12-1A0A0B4J245 112 aa10.57□□□□□ -0.72
ABCF3-210ENST00000473311 RPL13AP40429 203 aaKnown RBP10.57□□□□□ -0.72
ABCF3-210ENST00000473311 OVOL1O14753 267 aa10.56□□□□□ -0.72
ABCF3-210ENST00000473311 IGHV3-11P01762 117 aa10.56□□□□□ -0.72
ABCF3-210ENST00000473311 RPS28P62857 69 aaKnown RBP10.56□□□□□ -0.72
ABCF3-210ENST00000473311 SRSF9Q13242 221 aaKnown RBP eCLIP10.56□□□□□ -0.72
ABCF3-210ENST00000473311 F6UB75 175 aa10.56□□□□□ -0.72
ABCF3-210ENST00000473311 RNASE4P34096 147 aaKnown RBP10.56□□□□□ -0.72
ABCF3-210ENST00000473311 C19orf54Q5BKX5 351 aa10.56□□□□□ -0.72
ABCF3-210ENST00000473311 TOMM6Q96B49 74 aa10.56□□□□□ -0.72
ABCF3-210ENST00000473311 TRAV2A0A0B4J234 112 aa10.55□□□□□ -0.72
ABCF3-210ENST00000473311 NDUFA4O00483 81 aa10.55□□□□□ -0.72
ABCF3-210ENST00000473311 NDUFA11Q86Y39 141 aa10.55□□□□□ -0.72
ABCF3-210ENST00000473311 ABCA2Q9BZC7 2435 aa10.55□□□□□ -0.72
ABCF3-210ENST00000473311 CD7P09564 240 aa10.55□□□□□ -0.72
ABCF3-210ENST00000473311 LY6EQ16553 131 aa10.55□□□□□ -0.72
ABCF3-210ENST00000473311 M0R2P5 195 aa10.54□□□□□ -0.72
ABCF3-210ENST00000473311 GNRH2O43555 120 aa10.54□□□□□ -0.72
ABCF3-210ENST00000473311 LGALS1P09382 135 aaKnown RBP10.54□□□□□ -0.72
ABCF3-210ENST00000473311 LINC00694P0DN24 101 aa10.54□□□□□ -0.72
ABCF3-210ENST00000473311 SLC25A16P16260 332 aa10.54□□□□□ -0.72
ABCF3-210ENST00000473311 C2orf66Q6UXQ4 117 aa10.54□□□□□ -0.72
ABCF3-210ENST00000473311 IMUPQ9GZP8 106 aa10.54□□□□□ -0.72
ABCF3-210ENST00000473311 SOCS3O14543 225 aa10.54□□□□□ -0.72
ABCF3-210ENST00000473311 C10orf126Q8N4M7 172 aa10.54□□□□□ -0.72
ABCF3-210ENST00000473311 NEXN-AS1Q8NBZ9 246 aa10.54□□□□□ -0.72
ABCF3-210ENST00000473311 ODF3Q96PU9 254 aa10.54□□□□□ -0.72
ABCF3-210ENST00000473311 FAM240AA0A1B0GVK7 77 aa10.53□□□□□ -0.72
ABCF3-210ENST00000473311 SCGB1D4Q6XE38 83 aa10.53□□□□□ -0.72
ABCF3-210ENST00000473311 IGHV1-69DA0A0B4J2H0 117 aa10.53□□□□□ -0.72
ABCF3-210ENST00000473311 TRBV7-7A0A0K0K1E9 115 aa10.53□□□□□ -0.72
ABCF3-210ENST00000473311 C9JAW5 83 aa10.53□□□□□ -0.72
ABCF3-210ENST00000473311 NDUFA7O95182 113 aa10.53□□□□□ -0.72
ABCF3-210ENST00000473311 IGHV1-69P01742 117 aa10.53□□□□□ -0.72
ABCF3-210ENST00000473311 CRIP2P52943 208 aaPredicted RBP10.53□□□□□ -0.72
ABCF3-210ENST00000473311 Q8N1Y9 231 aa10.53□□□□□ -0.72
ABCF3-210ENST00000473311 BAALCQ8WXS3 180 aa10.53□□□□□ -0.72
ABCF3-210ENST00000473311 PRADC1Q9BSG0 188 aa10.53□□□□□ -0.72
ABCF3-210ENST00000473311 ATP5G1P05496 136 aa10.52□□□□□ -0.73
ABCF3-210ENST00000473311 VPS13CQ709C8 3753 aa10.52□□□□□ -0.73
ABCF3-210ENST00000473311 RNF223E7ERA6 249 aa10.51□□□□□ -0.73
ABCF3-210ENST00000473311 UQCRQO14949 82 aa10.51□□□□□ -0.73
ABCF3-210ENST00000473311 RNASE3P12724 160 aaKnown RBP10.51□□□□□ -0.73
ABCF3-210ENST00000473311 FAM19A5Q7Z5A7 132 aaPredicted RBP10.51□□□□□ -0.73
ABCF3-210ENST00000473311 TMEM101Q96IK0 257 aa10.51□□□□□ -0.73
ABCF3-210ENST00000473311 IGHV4-39P01824 125 aa10.51□□□□□ -0.73
ABCF3-210ENST00000473311 C9orf153Q5TBE3 101 aa10.51□□□□□ -0.73
ABCF3-210ENST00000473311 MUC4Q99102 2169 aa10.51□□□□□ -0.73
ABCF3-210ENST00000473311 NCOR2Q9Y618 2525 aa10.51□□□□□ -0.73
ABCF3-210ENST00000473311 MED14OSP0DP75 135 aa10.5□□□□□ -0.73
ABCF3-210ENST00000473311 SFTA2Q6UW10 78 aa10.5□□□□□ -0.73
ABCF3-210ENST00000473311 C3orf22Q8N5N4 141 aa10.5□□□□□ -0.73
ABCF3-210ENST00000473311 DEFB104AQ8WTQ1 72 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms