RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 NPC2P61916 151 aa4.07□□□□□ -1.76
RTF1-203ENST00000473214 DYNLT1P63172 113 aa4.07□□□□□ -1.76
RTF1-203ENST00000473214 SYCNQ0VAF6 134 aa4.07□□□□□ -1.76
RTF1-203ENST00000473214 KHDC3LQ587J8 217 aa4.07□□□□□ -1.76
RTF1-203ENST00000473214 PATE2Q6UY27 113 aa4.07□□□□□ -1.76
RTF1-203ENST00000473214 OR5AS1Q8N127 324 aa4.07□□□□□ -1.76
RTF1-203ENST00000473214 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.07□□□□□ -1.76
RTF1-203ENST00000473214 C10orf82Q8WW14 230 aa4.07□□□□□ -1.76
RTF1-203ENST00000473214 TNRC6AQ8NDV7 1962 aaKnown RBP4.07□□□□□ -1.76
RTF1-203ENST00000473214 TMEM223A0PJW6 202 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 COLCA2A8K830 154 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 C17orf51A8MQB3 221 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 LECT2O14960 151 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 HYPMO75409 117 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 SNCGO76070 127 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 LY6HO94772 140 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 P0C879 139 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 ZNF705BP0CI00 300 aaPredicted RBP4.06□□□□□ -1.76
RTF1-203ENST00000473214 FABP4P15090 132 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 DEFA5Q01523 94 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 UNQ5815/PRO19632Q6UWF5 114 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 ALKAL2Q6UX46 152 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 DPPA3Q6W0C5 159 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 Q6ZS92 163 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 UPK3BQ9BT76 320 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 REG4Q9BYZ8 158 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 TAS2R4Q9NYW5 299 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 ZNF222Q9UK12 451 aa4.06□□□□□ -1.76
RTF1-203ENST00000473214 CCDC168Q8NDH2 2452 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 ABCA2Q9BZC7 2435 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 TRBV24-1A0A075B6N3 115 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 LOC107986453A0A1B0GWG9 222 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 GRIFINA4D1Z8 144 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 A6NDX4 124 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 H3BMM0 161 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 NDUFB6O95139 128 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 TCL1BO95988 128 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 NPYP01303 97 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 IGLV2-11P01706 119 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 GYPBP06028 91 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 T-ENOLP0DO92 83 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 SNCAP37840 140 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 FOXF1Q12946 379 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 SS18Q15532 418 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 IL17AQ16552 155 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 MIAQ16674 131 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 DEFB133Q30KQ1 61 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 Q8N2B8 174 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 Q8N9W7 124 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 PFN4Q8NHR9 129 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 CLDND2Q8NHS1 167 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 RHOXF1Q8NHV9 184 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 C10orf105Q8TEF2 133 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 UBE2WQ96B02 151 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 CHCHD1Q96BP2 118 aaKnown RBP4.05□□□□□ -1.76
RTF1-203ENST00000473214 ZNRD1Q9P1U0 126 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 ANKHD1Q8IWZ3 2542 aaKnown RBP4.05□□□□□ -1.76
RTF1-203ENST00000473214 TET2Q6N021 2002 aaPredicted RBP4.05□□□□□ -1.76
RTF1-203ENST00000473214 SVILO95425 2214 aa4.05□□□□□ -1.76
RTF1-203ENST00000473214 ESPL1Q14674 2120 aa4.04□□□□□ -1.76
RTF1-203ENST00000473214 MDFIC2A0A1B0GVS7 189 aa4.04□□□□□ -1.76
RTF1-203ENST00000473214 C19orf71A6NCJ1 209 aa4.04□□□□□ -1.76
RTF1-203ENST00000473214 C11orf94C9JXX5 98 aa4.04□□□□□ -1.76
RTF1-203ENST00000473214 CKS2P33552 79 aa4.04□□□□□ -1.76
RTF1-203ENST00000473214 RPL26P61254 145 aaKnown RBP4.04□□□□□ -1.76
RTF1-203ENST00000473214 Q0VG73 95 aa4.04□□□□□ -1.76
RTF1-203ENST00000473214 C2orf83Q53S99 150 aa4.04□□□□□ -1.76
RTF1-203ENST00000473214 Q5BKY6 102 aa4.04□□□□□ -1.76
RTF1-203ENST00000473214 Q6ZTC4 211 aa4.04□□□□□ -1.76
RTF1-203ENST00000473214 LINC01560Q8TB33 94 aa4.04□□□□□ -1.76
RTF1-203ENST00000473214 SMCO4Q9NRQ5 59 aa4.04□□□□□ -1.76
RTF1-203ENST00000473214 ASF1BQ9NVP2 202 aa4.04□□□□□ -1.76
RTF1-203ENST00000473214 OR5V1Q9UGF6 321 aa4.04□□□□□ -1.76
RTF1-203ENST00000473214 TPRKBQ9Y3C4 175 aa4.04□□□□□ -1.76
RTF1-203ENST00000473214 ICOSQ9Y6W8 199 aa4.04□□□□□ -1.76
RTF1-203ENST00000473214 K7EP34 96 aa4.03□□□□□ -1.76
RTF1-203ENST00000473214 SDCBPO00560 298 aaPredicted RBP4.03□□□□□ -1.76
RTF1-203ENST00000473214 PDCD5O14737 125 aa4.03□□□□□ -1.76
RTF1-203ENST00000473214 TIMM17BO60830 172 aa4.03□□□□□ -1.76
RTF1-203ENST00000473214 SHBGP04278 402 aa4.03□□□□□ -1.76
RTF1-203ENST00000473214 CCL4P13236 92 aa4.03□□□□□ -1.76
RTF1-203ENST00000473214 CRIP2P52943 208 aaPredicted RBP4.03□□□□□ -1.76
RTF1-203ENST00000473214 SUPT4H1P63272 117 aaKnown RBP4.03□□□□□ -1.76
RTF1-203ENST00000473214 DEFB109BQ30KR1 87 aa4.03□□□□□ -1.76
RTF1-203ENST00000473214 ZNF660Q6AZW8 331 aaPredicted RBP4.03□□□□□ -1.76
RTF1-203ENST00000473214 IGFL3Q6UXB1 125 aa4.03□□□□□ -1.76
RTF1-203ENST00000473214 LINC00299Q6ZSB3 139 aa4.03□□□□□ -1.76
RTF1-203ENST00000473214 SMCR5Q8TEV8 140 aa4.03□□□□□ -1.76
RTF1-203ENST00000473214 CLEC2BQ92478 149 aa4.03□□□□□ -1.76
RTF1-203ENST00000473214 IMMP2LQ96T52 175 aa4.03□□□□□ -1.76
RTF1-203ENST00000473214 DSCR8Q96T75 97 aa4.03□□□□□ -1.76
RTF1-203ENST00000473214 SDF2L1Q9HCN8 221 aa4.03□□□□□ -1.76
RTF1-203ENST00000473214 TRAPPC1Q9Y5R8 145 aa4.03□□□□□ -1.76
RTF1-203ENST00000473214 U3KQK5 164 aa4.03□□□□□ -1.76
RTF1-203ENST00000473214 PIKFYVEQ9Y2I7 2098 aa4.02□□□□□ -1.77
RTF1-203ENST00000473214 DSCAMO60469 2012 aa4.02□□□□□ -1.77
RTF1-203ENST00000473214 DCHS2Q6V1P9 2916 aa4.02□□□□□ -1.77
RTF1-203ENST00000473214 EML6Q6ZMW3 1958 aa4.02□□□□□ -1.77
RTF1-203ENST00000473214 NIPBLQ6KC79 2804 aaeCLIP4.02□□□□□ -1.77
RTF1-203ENST00000473214 IGLV3-9A0A075B6K5 115 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms