RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 DNAH11Q96DT5 4516 aa10.59□□□□□ -0.71
MRPL55-226ENST00000473066 PKD1P98161 4303 aa10.58□□□□□ -0.72
MRPL55-226ENST00000473066 A0A087WWL8 130 aa10.58□□□□□ -0.72
MRPL55-226ENST00000473066 PDE6DO43924 150 aa10.58□□□□□ -0.72
MRPL55-226ENST00000473066 LINC01556Q5JQF7 62 aa10.58□□□□□ -0.72
MRPL55-226ENST00000473066 Q6ZRN7 208 aaPredicted RBP10.58□□□□□ -0.72
MRPL55-226ENST00000473066 DAZAP1Q96EP5 407 aaKnown RBP10.58□□□□□ -0.72
MRPL55-226ENST00000473066 DERL1Q9BUN8 251 aa10.58□□□□□ -0.72
MRPL55-226ENST00000473066 BCL2P10415 239 aa10.57□□□□□ -0.72
MRPL55-226ENST00000473066 TAGLN2P37802 199 aaKnown RBP10.57□□□□□ -0.72
MRPL55-226ENST00000473066 GNG4P50150 75 aa10.57□□□□□ -0.72
MRPL55-226ENST00000473066 SPANXN1Q5VSR9 72 aa10.57□□□□□ -0.72
MRPL55-226ENST00000473066 UFSP1Q6NVU6 142 aa10.57□□□□□ -0.72
MRPL55-226ENST00000473066 Q6ZSN1 163 aa10.57□□□□□ -0.72
MRPL55-226ENST00000473066 C14orf178Q8N769 122 aaPredicted RBP10.57□□□□□ -0.72
MRPL55-226ENST00000473066 DYNC1H1Q14204 4646 aaKnown RBP10.57□□□□□ -0.72
MRPL55-226ENST00000473066 A0A087WWC5 75 aa10.56□□□□□ -0.72
MRPL55-226ENST00000473066 PSCAO43653 123 aa10.56□□□□□ -0.72
MRPL55-226ENST00000473066 IGHV3-30P01768 117 aa10.56□□□□□ -0.72
MRPL55-226ENST00000473066 IGHV3-33P01772 117 aa10.56□□□□□ -0.72
MRPL55-226ENST00000473066 IGHV3-30-3P0DP02 117 aa10.56□□□□□ -0.72
MRPL55-226ENST00000473066 IGHV3-30-5P0DP03 117 aa10.56□□□□□ -0.72
MRPL55-226ENST00000473066 ZNF56Q15929 161 aa10.56□□□□□ -0.72
MRPL55-226ENST00000473066 C9orf62Q8N4C0 152 aa10.56□□□□□ -0.72
MRPL55-226ENST00000473066 SMIM12Q96EX1 92 aa10.56□□□□□ -0.72
MRPL55-226ENST00000473066 MED9Q9NWA0 146 aa10.56□□□□□ -0.72
MRPL55-226ENST00000473066 VAX2Q9UIW0 290 aa10.56□□□□□ -0.72
MRPL55-226ENST00000473066 TNFRSF18Q9Y5U5 241 aa10.56□□□□□ -0.72
MRPL55-226ENST00000473066 LINC00694P0DN24 101 aa10.55□□□□□ -0.72
MRPL55-226ENST00000473066 RPL36AP83881 106 aaKnown RBP10.55□□□□□ -0.72
MRPL55-226ENST00000473066 OR10AG1Q8NH19 301 aa10.55□□□□□ -0.72
MRPL55-226ENST00000473066 RPL36ALQ969Q0 106 aaKnown RBP10.55□□□□□ -0.72
MRPL55-226ENST00000473066 BIN3Q9NQY0 253 aa10.55□□□□□ -0.72
MRPL55-226ENST00000473066 KIAA1109Q2LD37 5005 aa10.54□□□□□ -0.72
MRPL55-226ENST00000473066 HERC2O95714 4834 aa10.54□□□□□ -0.72
MRPL55-226ENST00000473066 TRBV10-1A0A0K0K1A3 114 aa10.54□□□□□ -0.72
MRPL55-226ENST00000473066 SNAI2O43623 268 aa10.54□□□□□ -0.72
MRPL55-226ENST00000473066 OR5AL1P0C617 328 aa10.54□□□□□ -0.72
MRPL55-226ENST00000473066 RPS20P60866 119 aaKnown RBP10.54□□□□□ -0.72
MRPL55-226ENST00000473066 AP1S3Q96PC3 154 aa10.54□□□□□ -0.72
MRPL55-226ENST00000473066 Q9HAA7 133 aa10.54□□□□□ -0.72
MRPL55-226ENST00000473066 XKRY2A2RUG3 117 aa10.53□□□□□ -0.72
MRPL55-226ENST00000473066 SMIM17P0DL12 118 aa10.53□□□□□ -0.72
MRPL55-226ENST00000473066 KRTAP10-2P60368 255 aa10.53□□□□□ -0.72
MRPL55-226ENST00000473066 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.53□□□□□ -0.72
MRPL55-226ENST00000473066 OR2D3Q8NGH3 330 aa10.53□□□□□ -0.72
MRPL55-226ENST00000473066 TPPP3Q9BW30 176 aa10.53□□□□□ -0.72
MRPL55-226ENST00000473066 URGCP-MRPS24S4R325 110 aa10.53□□□□□ -0.72
MRPL55-226ENST00000473066 RAB19A4D1S5 217 aa10.52□□□□□ -0.73
MRPL55-226ENST00000473066 IBA57-AS1B1ANH7 110 aa10.52□□□□□ -0.73
MRPL55-226ENST00000473066 P01737 135 aa10.52□□□□□ -0.73
MRPL55-226ENST00000473066 RAB4BP61018 213 aa10.52□□□□□ -0.73
MRPL55-226ENST00000473066 BLOC1S1P78537 153 aa10.52□□□□□ -0.73
MRPL55-226ENST00000473066 LAGE3Q14657 143 aa10.52□□□□□ -0.73
MRPL55-226ENST00000473066 CDPF1Q6NVV7 123 aa10.52□□□□□ -0.73
MRPL55-226ENST00000473066 ALKAL2Q6UX46 152 aa10.52□□□□□ -0.73
MRPL55-226ENST00000473066 A0A087WTM6 91 aa10.51□□□□□ -0.73
MRPL55-226ENST00000473066 MUC21A0A0G2JKD1 596 aa10.51□□□□□ -0.73
MRPL55-226ENST00000473066 MUC21A0A140T8X8 626 aa10.51□□□□□ -0.73
MRPL55-226ENST00000473066 F5H697 171 aa10.51□□□□□ -0.73
MRPL55-226ENST00000473066 CDK2AP2O75956 126 aa10.51□□□□□ -0.73
MRPL55-226ENST00000473066 SSTP61278 116 aa10.51□□□□□ -0.73
MRPL55-226ENST00000473066 TOR2AQ5JU69 321 aa10.51□□□□□ -0.73
MRPL55-226ENST00000473066 KCNIP4Q6PIL6 250 aa10.51□□□□□ -0.73
MRPL55-226ENST00000473066 FER1L6-AS1Q8NA97 138 aa10.51□□□□□ -0.73
MRPL55-226ENST00000473066 SSBP4Q9BWG4 385 aaPredicted RBP10.51□□□□□ -0.73
MRPL55-226ENST00000473066 PGPEP1Q9NXJ5 209 aa10.51□□□□□ -0.73
MRPL55-226ENST00000473066 TRBV7-3A0A075B6L6 115 aa10.5□□□□□ -0.73
MRPL55-226ENST00000473066 IGLV2-8P01709 118 aa10.5□□□□□ -0.73
MRPL55-226ENST00000473066 Q9UF83 564 aa10.5□□□□□ -0.73
MRPL55-226ENST00000473066 CACNG7P62955 275 aa10.49□□□□□ -0.73
MRPL55-226ENST00000473066 TM2D2Q9BX73 214 aa10.49□□□□□ -0.73
MRPL55-226ENST00000473066 C19orf71A6NCJ1 209 aa10.48□□□□□ -0.73
MRPL55-226ENST00000473066 MGPP08493 103 aa10.48□□□□□ -0.73
MRPL55-226ENST00000473066 GZMBP10144 247 aa10.48□□□□□ -0.73
MRPL55-226ENST00000473066 UBE2D3P61077 147 aa10.48□□□□□ -0.73
MRPL55-226ENST00000473066 UBE2D2P62837 147 aa10.48□□□□□ -0.73
MRPL55-226ENST00000473066 TRBV20OR9-2A0A075B6H5 130 aa10.47□□□□□ -0.73
MRPL55-226ENST00000473066 A0A087WX48 190 aa10.47□□□□□ -0.73
MRPL55-226ENST00000473066 TRAV8-3A0A0A6YYJ7 113 aa10.47□□□□□ -0.73
MRPL55-226ENST00000473066 RBFOX3A6NFN3 312 aa10.47□□□□□ -0.73
MRPL55-226ENST00000473066 IGLC6P0CF74 106 aa10.47□□□□□ -0.73
MRPL55-226ENST00000473066 OR10G8Q8NGN5 311 aa10.47□□□□□ -0.73
MRPL55-226ENST00000473066 RMI2Q96E14 147 aa10.47□□□□□ -0.73
MRPL55-226ENST00000473066 F2Z2F3 143 aa10.46□□□□□ -0.73
MRPL55-226ENST00000473066 TMEM250H0YL14 139 aa10.46□□□□□ -0.73
MRPL55-226ENST00000473066 H7C1H1 209 aa10.46□□□□□ -0.73
MRPL55-226ENST00000473066 TRGC1P0CF51 173 aa10.46□□□□□ -0.73
MRPL55-226ENST00000473066 ELOBQ15370 118 aa10.46□□□□□ -0.73
MRPL55-226ENST00000473066 DAZ4Q86SG3 579 aaKnown RBP10.46□□□□□ -0.73
MRPL55-226ENST00000473066 NEXN-AS1Q8NBZ9 246 aa10.46□□□□□ -0.73
MRPL55-226ENST00000473066 CHCHD7Q9BUK0 85 aa10.46□□□□□ -0.73
MRPL55-226ENST00000473066 DAZ3Q9NR90 486 aaKnown RBP10.46□□□□□ -0.73
MRPL55-226ENST00000473066 NKX2-5P52952 324 aaPredicted RBP10.45□□□□□ -0.74
MRPL55-226ENST00000473066 TMEM97Q5BJF2 176 aa10.45□□□□□ -0.74
MRPL55-226ENST00000473066 NIT1Q86X76 327 aa10.45□□□□□ -0.74
MRPL55-226ENST00000473066 Q8N3U1 123 aa10.45□□□□□ -0.74
MRPL55-226ENST00000473066 MAPKAPK5-AS1Q8N8E1 139 aa10.45□□□□□ -0.74
MRPL55-226ENST00000473066 FUSP35637 526 aaKnown RBP eCLIP10.44□□□□□ -0.74
MRPL55-226ENST00000473066 CEBPGP53567 150 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms