RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 Q6ZSN1 163 aa13.18□□□□□ -0.3
COMMD1-208ENST00000472729 SCRT2Q9NQ03 307 aa13.18□□□□□ -0.3
COMMD1-208ENST00000472729 hCG_2014768A0A024R1R8 64 aa13.17□□□□□ -0.3
COMMD1-208ENST00000472729 PDE6DO43924 150 aa13.17□□□□□ -0.3
COMMD1-208ENST00000472729 IGHV3-30P01768 117 aa13.17□□□□□ -0.3
COMMD1-208ENST00000472729 IGHV3-33P01772 117 aa13.17□□□□□ -0.3
COMMD1-208ENST00000472729 IGHV3-30-3P0DP02 117 aa13.17□□□□□ -0.3
COMMD1-208ENST00000472729 IGHV3-30-5P0DP03 117 aa13.17□□□□□ -0.3
COMMD1-208ENST00000472729 Q6ZNX1 250 aa13.17□□□□□ -0.3
COMMD1-208ENST00000472729 Q6ZRN7 208 aaPredicted RBP13.17□□□□□ -0.3
COMMD1-208ENST00000472729 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.17□□□□□ -0.3
COMMD1-208ENST00000472729 URGCP-MRPS24S4R325 110 aa13.17□□□□□ -0.3
COMMD1-208ENST00000472729 DNAH11Q96DT5 4516 aa13.17□□□□□ -0.3
COMMD1-208ENST00000472729 GNG4P50150 75 aa13.16□□□□□ -0.3
COMMD1-208ENST00000472729 RPL19P84098 196 aaKnown RBP13.16□□□□□ -0.3
COMMD1-208ENST00000472729 MEF2BQ02080 365 aaPredicted RBP13.16□□□□□ -0.3
COMMD1-208ENST00000472729 KCNIP4Q6PIL6 250 aa13.16□□□□□ -0.3
COMMD1-208ENST00000472729 C14orf178Q8N769 122 aaPredicted RBP13.16□□□□□ -0.3
COMMD1-208ENST00000472729 MLST8Q9BVC4 326 aa13.16□□□□□ -0.3
COMMD1-208ENST00000472729 PKHD1P08F94 4074 aa13.16□□□□□ -0.3
COMMD1-208ENST00000472729 CDK2AP2O75956 126 aa13.15□□□□□ -0.3
COMMD1-208ENST00000472729 CXCL1P09341 107 aa13.15□□□□□ -0.3
COMMD1-208ENST00000472729 SMIM17P0DL12 118 aa13.15□□□□□ -0.3
COMMD1-208ENST00000472729 TAGLN2P37802 199 aaKnown RBP13.15□□□□□ -0.3
COMMD1-208ENST00000472729 KRTAP10-2P60368 255 aa13.15□□□□□ -0.3
COMMD1-208ENST00000472729 RPL36AP83881 106 aaKnown RBP13.15□□□□□ -0.3
COMMD1-208ENST00000472729 CENPWQ5EE01 88 aa13.15□□□□□ -0.3
COMMD1-208ENST00000472729 UFSP1Q6NVU6 142 aa13.15□□□□□ -0.3
COMMD1-208ENST00000472729 RPL36ALQ969Q0 106 aaKnown RBP13.15□□□□□ -0.3
COMMD1-208ENST00000472729 Q9HAA7 133 aa13.15□□□□□ -0.3
COMMD1-208ENST00000472729 BIN3Q9NQY0 253 aa13.15□□□□□ -0.3
COMMD1-208ENST00000472729 MED9Q9NWA0 146 aa13.15□□□□□ -0.3
COMMD1-208ENST00000472729 IBA57-AS1B1ANH7 110 aa13.14□□□□□ -0.31
COMMD1-208ENST00000472729 SSTP61278 116 aa13.14□□□□□ -0.31
COMMD1-208ENST00000472729 ZNF56Q15929 161 aa13.14□□□□□ -0.31
COMMD1-208ENST00000472729 C11orf52Q96A22 123 aa13.14□□□□□ -0.31
COMMD1-208ENST00000472729 TPPP3Q9BW30 176 aa13.14□□□□□ -0.31
COMMD1-208ENST00000472729 PKD1P98161 4303 aa13.14□□□□□ -0.31
COMMD1-208ENST00000472729 TRBV10-1A0A0K0K1A3 114 aa13.13□□□□□ -0.31
COMMD1-208ENST00000472729 XKRY2A2RUG3 117 aa13.13□□□□□ -0.31
COMMD1-208ENST00000472729 F5H697 171 aa13.13□□□□□ -0.31
COMMD1-208ENST00000472729 RPS20P60866 119 aaKnown RBP13.13□□□□□ -0.31
COMMD1-208ENST00000472729 TOR2AQ5JU69 321 aa13.13□□□□□ -0.31
COMMD1-208ENST00000472729 CDPF1Q6NVV7 123 aa13.13□□□□□ -0.31
COMMD1-208ENST00000472729 DERL1Q9BUN8 251 aa13.13□□□□□ -0.31
COMMD1-208ENST00000472729 VAX2Q9UIW0 290 aa13.13□□□□□ -0.31
COMMD1-208ENST00000472729 A0A087WTM6 91 aa13.12□□□□□ -0.31
COMMD1-208ENST00000472729 BCL2P10415 239 aa13.12□□□□□ -0.31
COMMD1-208ENST00000472729 RAB4BP61018 213 aa13.12□□□□□ -0.31
COMMD1-208ENST00000472729 OR10AG1Q8NH19 301 aa13.12□□□□□ -0.31
COMMD1-208ENST00000472729 SMIM12Q96EX1 92 aa13.12□□□□□ -0.31
COMMD1-208ENST00000472729 TM2D2Q9BX73 214 aa13.12□□□□□ -0.31
COMMD1-208ENST00000472729 MUC21A0A0G2JKD1 596 aa13.11□□□□□ -0.31
COMMD1-208ENST00000472729 MUC21A0A140T8X8 626 aa13.11□□□□□ -0.31
COMMD1-208ENST00000472729 OR5AL1P0C617 328 aa13.11□□□□□ -0.31
COMMD1-208ENST00000472729 OR2D3Q8NGH3 330 aa13.11□□□□□ -0.31
COMMD1-208ENST00000472729 DYNC1H1Q14204 4646 aaKnown RBP13.11□□□□□ -0.31
COMMD1-208ENST00000472729 P01737 135 aa13.1□□□□□ -0.31
COMMD1-208ENST00000472729 LAGE3Q14657 143 aa13.1□□□□□ -0.31
COMMD1-208ENST00000472729 TRBV7-3A0A075B6L6 115 aa13.09□□□□□ -0.31
COMMD1-208ENST00000472729 A0A087WX48 190 aa13.09□□□□□ -0.31
COMMD1-208ENST00000472729 TRAV8-3A0A0A6YYJ7 113 aa13.09□□□□□ -0.31
COMMD1-208ENST00000472729 RAB19A4D1S5 217 aa13.09□□□□□ -0.31
COMMD1-208ENST00000472729 SNAI2O43623 268 aa13.09□□□□□ -0.31
COMMD1-208ENST00000472729 LINC00694P0DN24 101 aa13.09□□□□□ -0.31
COMMD1-208ENST00000472729 FER1L6-AS1Q8NA97 138 aa13.09□□□□□ -0.31
COMMD1-208ENST00000472729 AP1S3Q96PC3 154 aa13.09□□□□□ -0.31
COMMD1-208ENST00000472729 SSBP4Q9BWG4 385 aaPredicted RBP13.09□□□□□ -0.31
COMMD1-208ENST00000472729 BLOC1S1P78537 153 aa13.08□□□□□ -0.32
COMMD1-208ENST00000472729 C9orf62Q8N4C0 152 aa13.08□□□□□ -0.32
COMMD1-208ENST00000472729 MAPKAPK5-AS1Q8N8E1 139 aa13.08□□□□□ -0.32
COMMD1-208ENST00000472729 Q9UF83 564 aa13.08□□□□□ -0.32
COMMD1-208ENST00000472729 ELOBQ15370 118 aa13.07□□□□□ -0.32
COMMD1-208ENST00000472729 RMI2Q96E14 147 aa13.07□□□□□ -0.32
COMMD1-208ENST00000472729 TMEM262E9PQX1 116 aa13.06□□□□□ -0.32
COMMD1-208ENST00000472729 CACNG7P62955 275 aa13.06□□□□□ -0.32
COMMD1-208ENST00000472729 F2Z2F3 143 aa13.05□□□□□ -0.32
COMMD1-208ENST00000472729 ALKAL2Q6UX46 152 aa13.05□□□□□ -0.32
COMMD1-208ENST00000472729 DAZ4Q86SG3 579 aaKnown RBP13.05□□□□□ -0.32
COMMD1-208ENST00000472729 DAZ3Q9NR90 486 aaKnown RBP13.05□□□□□ -0.32
COMMD1-208ENST00000472729 COX11Q9Y6N1 276 aa13.05□□□□□ -0.32
COMMD1-208ENST00000472729 GZMBP10144 247 aa13.04□□□□□ -0.32
COMMD1-208ENST00000472729 FUSP35637 526 aaKnown RBP eCLIP13.04□□□□□ -0.32
COMMD1-208ENST00000472729 UBE2D3P61077 147 aa13.04□□□□□ -0.32
COMMD1-208ENST00000472729 UBE2D2P62837 147 aa13.04□□□□□ -0.32
COMMD1-208ENST00000472729 IGLV5-52A0A0A0MRZ9 124 aa13.03□□□□□ -0.32
COMMD1-208ENST00000472729 H7C1H1 209 aa13.03□□□□□ -0.32
COMMD1-208ENST00000472729 IGLV2-8P01709 118 aa13.03□□□□□ -0.32
COMMD1-208ENST00000472729 MGPP08493 103 aa13.03□□□□□ -0.32
COMMD1-208ENST00000472729 OR10G8Q8NGN5 311 aa13.03□□□□□ -0.32
COMMD1-208ENST00000472729 C19orf71A6NCJ1 209 aa13.02□□□□□ -0.33
COMMD1-208ENST00000472729 RBFOX3A6NFN3 312 aa13.02□□□□□ -0.33
COMMD1-208ENST00000472729 GCSHP23434 173 aa13.02□□□□□ -0.33
COMMD1-208ENST00000472729 PKIAP61925 76 aa13.02□□□□□ -0.33
COMMD1-208ENST00000472729 TMEM97Q5BJF2 176 aa13.02□□□□□ -0.33
COMMD1-208ENST00000472729 NIT1Q86X76 327 aa13.02□□□□□ -0.33
COMMD1-208ENST00000472729 NTN5Q8WTR8 489 aaPredicted RBP13.02□□□□□ -0.33
COMMD1-208ENST00000472729 CHCHD7Q9BUK0 85 aa13.02□□□□□ -0.33
COMMD1-208ENST00000472729 TRBV6-8A0A0A6YYG3 113 aa13.01□□□□□ -0.33
COMMD1-208ENST00000472729 TRGC1P0CF51 173 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms