RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 SMUG1Q53HV7 270 aa5.71□□□□□ -1.5
XRN1-208ENST00000470537 SAPCD1Q5SSQ6 148 aa5.71□□□□□ -1.5
XRN1-208ENST00000470537 C9orf163Q8N9P6 203 aa5.71□□□□□ -1.5
XRN1-208ENST00000470537 OR2G3Q8NGZ4 309 aa5.71□□□□□ -1.5
XRN1-208ENST00000470537 PARLQ9H300 379 aa5.71□□□□□ -1.5
XRN1-208ENST00000470537 RNF213Q63HN8 5207 aa5.7□□□□□ -1.5
XRN1-208ENST00000470537 FAT3Q8TDW7 4589 aa5.7□□□□□ -1.5
XRN1-208ENST00000470537 TRAV6A0A075B6T7 132 aa5.7□□□□□ -1.5
XRN1-208ENST00000470537 TRBV10-1A0A0K0K1A3 114 aa5.7□□□□□ -1.5
XRN1-208ENST00000470537 MT1HL1P0DM35 61 aa5.7□□□□□ -1.5
XRN1-208ENST00000470537 LINC00694P0DN24 101 aa5.7□□□□□ -1.5
XRN1-208ENST00000470537 BTCP35070 178 aa5.7□□□□□ -1.5
XRN1-208ENST00000470537 RPL36AP83881 106 aaKnown RBP5.7□□□□□ -1.5
XRN1-208ENST00000470537 RPL19P84098 196 aaKnown RBP5.7□□□□□ -1.5
XRN1-208ENST00000470537 RPL36ALQ969Q0 106 aaKnown RBP5.7□□□□□ -1.5
XRN1-208ENST00000470537 LINC00479Q96M42 142 aa5.7□□□□□ -1.5
XRN1-208ENST00000470537 NUDT15Q9NV35 164 aa5.7□□□□□ -1.5
XRN1-208ENST00000470537 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
XRN1-208ENST00000470537 LYRM1O43325 122 aa5.69□□□□□ -1.5
XRN1-208ENST00000470537 RNASE3P12724 160 aaKnown RBP5.69□□□□□ -1.5
XRN1-208ENST00000470537 IL7P13232 177 aa5.69□□□□□ -1.5
XRN1-208ENST00000470537 ASIPP42127 132 aa5.69□□□□□ -1.5
XRN1-208ENST00000470537 MIAQ16674 131 aa5.69□□□□□ -1.5
XRN1-208ENST00000470537 C5orf17Q8NAS9 161 aa5.69□□□□□ -1.5
XRN1-208ENST00000470537 OR10G7Q8NGN6 311 aa5.69□□□□□ -1.5
XRN1-208ENST00000470537 TVP23CQ96ET8 276 aa5.69□□□□□ -1.5
XRN1-208ENST00000470537 RNF185Q96GF1 192 aa5.69□□□□□ -1.5
XRN1-208ENST00000470537 TRBV7-3A0A075B6L6 115 aa5.68□□□□□ -1.5
XRN1-208ENST00000470537 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.68□□□□□ -1.5
XRN1-208ENST00000470537 FABP5P3A8MUU1 101 aa5.68□□□□□ -1.5
XRN1-208ENST00000470537 USP17L23D6RBM5 183 aa5.68□□□□□ -1.5
XRN1-208ENST00000470537 ANGP03950 147 aaKnown RBP5.68□□□□□ -1.5
XRN1-208ENST00000470537 PET100P0DJ07 73 aa5.68□□□□□ -1.5
XRN1-208ENST00000470537 HNRNPA3P51991 378 aaKnown RBP5.68□□□□□ -1.5
XRN1-208ENST00000470537 SEC22CQ9BRL7 303 aa5.68□□□□□ -1.5
XRN1-208ENST00000470537 SAMD10Q9BYL1 202 aa5.68□□□□□ -1.5
XRN1-208ENST00000470537 IL36BQ9NZH7 164 aa5.68□□□□□ -1.5
XRN1-208ENST00000470537 PSG8Q9UQ74 426 aa5.68□□□□□ -1.5
XRN1-208ENST00000470537 HLA-DQA1P01909 254 aa5.67□□□□□ -1.5
XRN1-208ENST00000470537 TCRAP04437 139 aa5.67□□□□□ -1.5
XRN1-208ENST00000470537 FLI1Q01543 452 aaPredicted RBP5.67□□□□□ -1.5
XRN1-208ENST00000470537 TMEM97Q5BJF2 176 aa5.67□□□□□ -1.5
XRN1-208ENST00000470537 SDIM1Q6ZPB5 146 aa5.67□□□□□ -1.5
XRN1-208ENST00000470537 C14orf178Q8N769 122 aaPredicted RBP5.67□□□□□ -1.5
XRN1-208ENST00000470537 OR11H4Q8NGC9 324 aa5.67□□□□□ -1.5
XRN1-208ENST00000470537 C7orf33Q8WU49 177 aa5.67□□□□□ -1.5
XRN1-208ENST00000470537 RBM38Q9H0Z9 239 aaKnown RBP5.67□□□□□ -1.5
XRN1-208ENST00000470537 TRBV6-8A0A0A6YYG3 113 aa5.66□□□□□ -1.5
XRN1-208ENST00000470537 FAM240BA0A1B0GVZ2 78 aa5.66□□□□□ -1.5
XRN1-208ENST00000470537 PRSS1P07477 247 aa5.66□□□□□ -1.5
XRN1-208ENST00000470537 ZNF80P51504 273 aaPredicted RBP5.66□□□□□ -1.5
XRN1-208ENST00000470537 GNG5P63218 68 aa5.66□□□□□ -1.5
XRN1-208ENST00000470537 LRRC37A5PQ49AS3 106 aa5.66□□□□□ -1.5
XRN1-208ENST00000470537 FAM74A4Q5TZK3 123 aa5.66□□□□□ -1.5
XRN1-208ENST00000470537 ENHOQ6UWT2 76 aa5.66□□□□□ -1.5
XRN1-208ENST00000470537 PRNTQ86SH4 94 aa5.66□□□□□ -1.5
XRN1-208ENST00000470537 C15orf54Q8N8G6 183 aa5.66□□□□□ -1.5
XRN1-208ENST00000470537 DNAJC30Q96LL9 226 aa5.66□□□□□ -1.5
XRN1-208ENST00000470537 SGK494Q96LW2 274 aa5.66□□□□□ -1.5
XRN1-208ENST00000470537 PHLDA3Q9Y5J5 127 aa5.66□□□□□ -1.5
XRN1-208ENST00000470537 IGHV3-64A0A075B6Q5 118 aa5.65□□□□□ -1.5
XRN1-208ENST00000470537 B4DEV8 164 aa5.65□□□□□ -1.5
XRN1-208ENST00000470537 PLA2G10O15496 165 aa5.65□□□□□ -1.5
XRN1-208ENST00000470537 CT83Q5H943 113 aa5.65□□□□□ -1.5
XRN1-208ENST00000470537 UFSP1Q6NVU6 142 aa5.65□□□□□ -1.5
XRN1-208ENST00000470537 MZT2BQ6NZ67 158 aa5.65□□□□□ -1.5
XRN1-208ENST00000470537 TMEM75Q8N9X5 138 aa5.65□□□□□ -1.5
XRN1-208ENST00000470537 LINC01600Q96MT4 127 aa5.65□□□□□ -1.5
XRN1-208ENST00000470537 SDHCQ99643 169 aaPredicted RBP5.65□□□□□ -1.5
XRN1-208ENST00000470537 CHCHD5Q9BSY4 110 aa5.65□□□□□ -1.5
XRN1-208ENST00000470537 TMEM167BQ9NRX6 74 aa5.65□□□□□ -1.5
XRN1-208ENST00000470537 EPDR1Q9UM22 224 aa5.65□□□□□ -1.5
XRN1-208ENST00000470537 IGKV3D-20A0A0C4DH25 116 aa5.64□□□□□ -1.51
XRN1-208ENST00000470537 GZMBP10144 247 aa5.64□□□□□ -1.51
XRN1-208ENST00000470537 TPT1P13693 172 aaKnown RBP5.64□□□□□ -1.51
XRN1-208ENST00000470537 UBE2D3P61077 147 aa5.64□□□□□ -1.51
XRN1-208ENST00000470537 CNBPP62633 177 aaKnown RBP5.64□□□□□ -1.51
XRN1-208ENST00000470537 UBE2D2P62837 147 aa5.64□□□□□ -1.51
XRN1-208ENST00000470537 CIRBPQ14011 172 aaKnown RBP5.64□□□□□ -1.51
XRN1-208ENST00000470537 DNLZQ5SXM8 178 aa5.64□□□□□ -1.51
XRN1-208ENST00000470537 SFRP2Q96HF1 295 aa5.64□□□□□ -1.51
XRN1-208ENST00000470537 Q9UF83 564 aa5.64□□□□□ -1.51
XRN1-208ENST00000470537 HSPB11Q9Y547 144 aa5.64□□□□□ -1.51
XRN1-208ENST00000470537 TRAV8-4A0A0B4J246 113 aa5.63□□□□□ -1.51
XRN1-208ENST00000470537 H3BVH4 76 aa5.63□□□□□ -1.51
XRN1-208ENST00000470537 P01737 135 aa5.63□□□□□ -1.51
XRN1-208ENST00000470537 MBP02144 154 aa5.63□□□□□ -1.51
XRN1-208ENST00000470537 ARMS2P0C7Q2 107 aa5.63□□□□□ -1.51
XRN1-208ENST00000470537 ARL14EPLP0DKL9 152 aa5.63□□□□□ -1.51
XRN1-208ENST00000470537 RPL12P30050 165 aaKnown RBP5.63□□□□□ -1.51
XRN1-208ENST00000470537 CDC34P49427 236 aaPredicted RBP5.63□□□□□ -1.51
XRN1-208ENST00000470537 RAB4BP61018 213 aa5.63□□□□□ -1.51
XRN1-208ENST00000470537 REG3GQ6UW15 175 aa5.63□□□□□ -1.51
XRN1-208ENST00000470537 ZFP82Q8N141 532 aa5.63□□□□□ -1.51
XRN1-208ENST00000470537 OR10G8Q8NGN5 311 aa5.63□□□□□ -1.51
XRN1-208ENST00000470537 NKX6-2Q9C056 277 aaPredicted RBP5.63□□□□□ -1.51
XRN1-208ENST00000470537 JPT2Q9H910 190 aa5.63□□□□□ -1.51
XRN1-208ENST00000470537 LRP2P98164 4655 aa5.63□□□□□ -1.51
XRN1-208ENST00000470537 A0A087WWL8 130 aa5.62□□□□□ -1.51
XRN1-208ENST00000470537 A0A087WYN8 130 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms