RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 MORN5Q5VZ52 161 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 Q6ZSV7 163 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 Q8N1X5 172 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 Q8N7P7 452 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 PRSS33Q8NF86 280 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 TMEM263Q8WUH6 116 aaKnown RBP3.71□□□□□ -1.82
COL3A1-205ENST00000470167 C1orf147Q96MC9 270 aaPredicted RBP3.71□□□□□ -1.82
COL3A1-205ENST00000470167 PSENENQ9NZ42 101 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 ZFHX2Q9C0A1 2572 aaPredicted RBP3.71□□□□□ -1.82
COL3A1-205ENST00000470167 ZNF831Q5JPB2 1677 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 LCTP09848 1927 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 NUMA1Q14980 2115 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 ZFYVE26Q68DK2 2539 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 NCOR2Q9Y618 2525 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 USP34Q70CQ2 3546 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 IGKV1-27A0A075B6S5 117 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 IGHV3OR16-10A0A075B7F0 116 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 TRAV12-1A0A0B4J245 112 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 IGKV1-8A0A0C4DH67 115 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 SH2D1AO60880 128 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 IGHV3-30P01768 117 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 IGHV3-9P01782 118 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 IGKV1-16P04430 117 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 ARL14EPLP0DKL9 152 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 IGHV3-30-5P0DP03 117 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 COX6B1P14854 86 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 EIF4EBP1Q13541 118 aaPredicted RBP3.7□□□□□ -1.82
COL3A1-205ENST00000470167 S100A7L2Q5SY68 101 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 ATP1A1-AS1Q5TC04 95 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 ZNF826PQ6ZT77 177 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 LINC00269Q8N2A0 174 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 ZNRF1Q8ND25 227 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 CHCHD10Q8WYQ3 142 aaPredicted RBP3.7□□□□□ -1.82
COL3A1-205ENST00000470167 TTTY10Q9BZA0 68 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 ZNF702PQ9H963 129 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 TMEM167BQ9NRX6 74 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 COL18A1P39060 1754 aa3.7□□□□□ -1.82
COL3A1-205ENST00000470167 A0A0G2JRQ6 117 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 KRTAP9-7A8MTY7 169 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 C3orf84H3BNL1 204 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 COX7A2P2O60397 106 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 SNRNP200O75643 2136 aaKnown RBP3.69□□□□□ -1.82
COL3A1-205ENST00000470167 BGLAPP02818 100 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 SAA1P0DJI8 122 aaPredicted RBP3.69□□□□□ -1.82
COL3A1-205ENST00000470167 ZNF138P52744 262 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 LINC00242Q5T6M2 205 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 C11orf71Q6IPW1 123 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 SOSTDC1Q6X4U4 206 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 Q6ZRP5 223 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 ZNF575Q86XF7 245 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 FAM216BQ8N7L0 139 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 CLEC2BQ92478 149 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 FAM167A-AS1Q96KT0 104 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 PHLDA3Q9Y5J5 127 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 SMCHD1A6NHR9 2005 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 TRPM6Q9BX84 2022 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 KIAA1549LQ6ZVL6 1849 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 POLEQ07864 2286 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 NCOA6Q14686 2063 aaPredicted RBP3.69□□□□□ -1.82
COL3A1-205ENST00000470167 MYO16Q9Y6X6 1858 aa3.69□□□□□ -1.82
COL3A1-205ENST00000470167 IGLV3-9A0A075B6K5 115 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 IGHV1-69DA0A0B4J2H0 117 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 A0A0J9YY99 117 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 hDV103S1A0JD37 113 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 PMS2P5A8MQ11 134 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 C16orf90A8MZG2 172 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 PRSS2P07478 247 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 COX6CP09669 75 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 SEC61BP60468 96 aaKnown RBP3.68□□□□□ -1.82
COL3A1-205ENST00000470167 FHL1Q13642 323 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 SPANXN1Q5VSR9 72 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 SUMO4Q6EEV6 95 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 SFTA2Q6UW10 78 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 ARHGAP5-AS1Q96IT6 56 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 CYP4F30PQ9H0H9 118 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 RPP21Q9H633 154 aaKnown RBP3.68□□□□□ -1.82
COL3A1-205ENST00000470167 ZNF355PQ9NSJ1 428 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 REV3LO60673 3130 aa3.68□□□□□ -1.82
COL3A1-205ENST00000470167 ARHGEF17Q96PE2 2063 aaPredicted RBP3.67□□□□□ -1.82
COL3A1-205ENST00000470167 PTPRZ1P23471 2315 aaPredicted RBP3.67□□□□□ -1.82
COL3A1-205ENST00000470167 CFAP46Q8IYW2 2715 aa3.67□□□□□ -1.82
COL3A1-205ENST00000470167 HTTP42858 3142 aa3.67□□□□□ -1.82
COL3A1-205ENST00000470167 HELZ2Q9BYK8 2649 aaKnown RBP3.67□□□□□ -1.82
COL3A1-205ENST00000470167 DCHS1Q96JQ0 3298 aa3.67□□□□□ -1.82
COL3A1-205ENST00000470167 IGLV3-12A0A075B6K2 115 aa3.67□□□□□ -1.82
COL3A1-205ENST00000470167 RPS21P63220 83 aaKnown RBP3.67□□□□□ -1.82
COL3A1-205ENST00000470167 Q8N6K4 173 aa3.67□□□□□ -1.82
COL3A1-205ENST00000470167 NRACQ8N912 160 aa3.67□□□□□ -1.82
COL3A1-205ENST00000470167 PFN4Q8NHR9 129 aa3.67□□□□□ -1.82
COL3A1-205ENST00000470167 TMEM141Q96I45 108 aa3.67□□□□□ -1.82
COL3A1-205ENST00000470167 ZNF706Q9Y5V0 76 aaPredicted RBP3.67□□□□□ -1.82
COL3A1-205ENST00000470167 LRP4O75096 1905 aa3.67□□□□□ -1.82
COL3A1-205ENST00000470167 KALRNO60229 2985 aa3.67□□□□□ -1.82
COL3A1-205ENST00000470167 PCDH15Q96QU1 1955 aa3.67□□□□□ -1.82
COL3A1-205ENST00000470167 CEP250Q9BV73 2442 aa3.66□□□□□ -1.82
COL3A1-205ENST00000470167 WDFY4Q6ZS81 3184 aa3.66□□□□□ -1.82
COL3A1-205ENST00000470167 C2orf16Q68DN1 1984 aa3.66□□□□□ -1.82
COL3A1-205ENST00000470167 TRAV22A0A0B4J277 110 aa3.66□□□□□ -1.82
COL3A1-205ENST00000470167 IGHV5-51A0A0C4DH38 117 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms