RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 IGHV4-31P0DP07 118 aa10.69□□□□□ -0.7
SMARCD3-205ENST00000469154 TLN2Q9Y4G6 2542 aa10.69□□□□□ -0.7
SMARCD3-205ENST00000469154 AKAP9Q99996 3911 aa10.68□□□□□ -0.7
SMARCD3-205ENST00000469154 TEX15Q9BXT5 2789 aa10.68□□□□□ -0.7
SMARCD3-205ENST00000469154 TRBV7-3A0A075B6L6 115 aa10.68□□□□□ -0.7
SMARCD3-205ENST00000469154 A6NDX4 124 aa10.68□□□□□ -0.7
SMARCD3-205ENST00000469154 PF4V1P10720 104 aa10.68□□□□□ -0.7
SMARCD3-205ENST00000469154 DEFB1P60022 68 aa10.68□□□□□ -0.7
SMARCD3-205ENST00000469154 LY6EQ16553 131 aa10.68□□□□□ -0.7
SMARCD3-205ENST00000469154 C12orf74Q32Q52 190 aa10.68□□□□□ -0.7
SMARCD3-205ENST00000469154 BAALCQ8WXS3 180 aa10.68□□□□□ -0.7
SMARCD3-205ENST00000469154 SPRY2O43597 315 aa10.68□□□□□ -0.7
SMARCD3-205ENST00000469154 RNASE3P12724 160 aaKnown RBP10.68□□□□□ -0.7
SMARCD3-205ENST00000469154 ZNF479Q96JC4 524 aa10.68□□□□□ -0.7
SMARCD3-205ENST00000469154 RHPN1-AS1Q9BWJ2 59 aa10.68□□□□□ -0.7
SMARCD3-205ENST00000469154 F6UB75 175 aa10.67□□□□□ -0.7
SMARCD3-205ENST00000469154 GNRH2O43555 120 aa10.67□□□□□ -0.7
SMARCD3-205ENST00000469154 RPL32P62910 135 aaKnown RBP10.67□□□□□ -0.7
SMARCD3-205ENST00000469154 ACANP16112 2415 aa10.67□□□□□ -0.7
SMARCD3-205ENST00000469154 LINC01549A6NIU2 74 aa10.67□□□□□ -0.7
SMARCD3-205ENST00000469154 H3BUX3 64 aa10.67□□□□□ -0.7
SMARCD3-205ENST00000469154 AVPP01185 164 aa10.67□□□□□ -0.7
SMARCD3-205ENST00000469154 BAHCC1Q9P281 2608 aa10.67□□□□□ -0.7
SMARCD3-205ENST00000469154 IGHV4-38-2P0DP08 117 aa10.66□□□□□ -0.7
SMARCD3-205ENST00000469154 GATA3P23771 443 aa10.66□□□□□ -0.7
SMARCD3-205ENST00000469154 RIPPLY3P57055 190 aa10.66□□□□□ -0.7
SMARCD3-205ENST00000469154 SAMD13Q5VXD3 122 aa10.66□□□□□ -0.7
SMARCD3-205ENST00000469154 DAZ1Q9NQZ3 744 aaKnown RBP10.66□□□□□ -0.7
SMARCD3-205ENST00000469154 A0A1B0GWB2 263 aa10.66□□□□□ -0.7
SMARCD3-205ENST00000469154 FOXI2Q6ZQN5 318 aa10.66□□□□□ -0.7
SMARCD3-205ENST00000469154 PRSS29PA6NIE9 313 aa10.65□□□□□ -0.7
SMARCD3-205ENST00000469154 KLLNB2CW77 178 aa10.65□□□□□ -0.7
SMARCD3-205ENST00000469154 IGLV1-40P01703 118 aa10.65□□□□□ -0.7
SMARCD3-205ENST00000469154 ID1P41134 155 aa10.65□□□□□ -0.7
SMARCD3-205ENST00000469154 AGRNO00468 2067 aa10.65□□□□□ -0.7
SMARCD3-205ENST00000469154 LGALS1P09382 135 aaKnown RBP10.65□□□□□ -0.71
SMARCD3-205ENST00000469154 RRN3P1Q2M238 152 aa10.65□□□□□ -0.71
SMARCD3-205ENST00000469154 CYSLTR1Q9Y271 337 aa10.65□□□□□ -0.71
SMARCD3-205ENST00000469154 KIF25-AS1Q9Y6Z4 181 aa10.65□□□□□ -0.71
SMARCD3-205ENST00000469154 IGKV3-7A0A075B6H7 116 aa10.64□□□□□ -0.71
SMARCD3-205ENST00000469154 IGHV4OR15-8A0A075B7B6 117 aa10.64□□□□□ -0.71
SMARCD3-205ENST00000469154 A0A087WW49 117 aa10.64□□□□□ -0.71
SMARCD3-205ENST00000469154 F8W1H4 67 aa10.64□□□□□ -0.71
SMARCD3-205ENST00000469154 K7EMT4 169 aa10.64□□□□□ -0.71
SMARCD3-205ENST00000469154 RPL24P83731 157 aaKnown RBP10.64□□□□□ -0.71
SMARCD3-205ENST00000469154 PRADC1Q9BSG0 188 aa10.64□□□□□ -0.71
SMARCD3-205ENST00000469154 FAM159AQ6UWV7 190 aa10.64□□□□□ -0.71
SMARCD3-205ENST00000469154 LINC00315P59091 139 aa10.63□□□□□ -0.71
SMARCD3-205ENST00000469154 SCGB2A2Q13296 93 aa10.63□□□□□ -0.71
SMARCD3-205ENST00000469154 PAPPA-AS1Q5QFB9 102 aa10.63□□□□□ -0.71
SMARCD3-205ENST00000469154 MUC4Q99102 2169 aa10.63□□□□□ -0.71
SMARCD3-205ENST00000469154 TEX48A0A1B0GUV7 120 aa10.63□□□□□ -0.71
SMARCD3-205ENST00000469154 J3QLI3 93 aa10.62□□□□□ -0.71
SMARCD3-205ENST00000469154 BLCAPP62952 87 aa10.62□□□□□ -0.71
SMARCD3-205ENST00000469154 CFHR3Q02985 330 aa10.62□□□□□ -0.71
SMARCD3-205ENST00000469154 OTOGQ6ZRI0 2925 aa10.62□□□□□ -0.71
SMARCD3-205ENST00000469154 ZFHX3Q15911 3703 aa10.62□□□□□ -0.71
SMARCD3-205ENST00000469154 ZNF815PA8K554 130 aa10.62□□□□□ -0.71
SMARCD3-205ENST00000469154 DUSP14O95147 198 aaKnown RBP10.62□□□□□ -0.71
SMARCD3-205ENST00000469154 HERVK_113P61574 105 aa10.62□□□□□ -0.71
SMARCD3-205ENST00000469154 SUMO4Q6EEV6 95 aa10.62□□□□□ -0.71
SMARCD3-205ENST00000469154 ZNF580Q9UK33 172 aa10.62□□□□□ -0.71
SMARCD3-205ENST00000469154 TP53TG1Q9Y2A0 90 aa10.62□□□□□ -0.71
SMARCD3-205ENST00000469154 SONP18583 2426 aaKnown RBP10.62□□□□□ -0.71
SMARCD3-205ENST00000469154 POLR2KP53803 58 aaKnown RBP10.61□□□□□ -0.71
SMARCD3-205ENST00000469154 LCNL1Q6ZST4 164 aa10.61□□□□□ -0.71
SMARCD3-205ENST00000469154 TMEM141Q96I45 108 aa10.61□□□□□ -0.71
SMARCD3-205ENST00000469154 VCYO14598 125 aa10.6□□□□□ -0.71
SMARCD3-205ENST00000469154 ZFP2Q6ZN57 461 aa10.6□□□□□ -0.71
SMARCD3-205ENST00000469154 ODF3Q96PU9 254 aa10.6□□□□□ -0.71
SMARCD3-205ENST00000469154 HOXA3O43365 443 aaPredicted RBP10.6□□□□□ -0.71
SMARCD3-205ENST00000469154 Q6ZS46 218 aa10.6□□□□□ -0.71
SMARCD3-205ENST00000469154 DCANP1Q8TF63 244 aa10.6□□□□□ -0.71
SMARCD3-205ENST00000469154 KIR2DL4Q99706 377 aa10.6□□□□□ -0.71
SMARCD3-205ENST00000469154 CRYGDP07320 174 aa10.59□□□□□ -0.71
SMARCD3-205ENST00000469154 SRD5A1P18405 259 aa10.59□□□□□ -0.71
SMARCD3-205ENST00000469154 PMVKQ15126 192 aa10.59□□□□□ -0.71
SMARCD3-205ENST00000469154 SCGB1D4Q6XE38 83 aa10.59□□□□□ -0.71
SMARCD3-205ENST00000469154 TIMM17AQ99595 171 aa10.59□□□□□ -0.71
SMARCD3-205ENST00000469154 SPANXB1Q9NS25 103 aaPredicted RBP10.59□□□□□ -0.71
SMARCD3-205ENST00000469154 IGLV4-69A0A075B6H9 119 aa10.59□□□□□ -0.71
SMARCD3-205ENST00000469154 IGIPA6NJ69 53 aa10.59□□□□□ -0.71
SMARCD3-205ENST00000469154 J3QR89 54 aa10.59□□□□□ -0.71
SMARCD3-205ENST00000469154 CD7P09564 240 aa10.59□□□□□ -0.71
SMARCD3-205ENST00000469154 C11orf86A6NJI1 115 aa10.58□□□□□ -0.72
SMARCD3-205ENST00000469154 LGALS9O00182 355 aa10.58□□□□□ -0.72
SMARCD3-205ENST00000469154 TSHBP01222 138 aa10.58□□□□□ -0.72
SMARCD3-205ENST00000469154 SETXQ7Z333 2677 aaKnown RBP10.58□□□□□ -0.72
SMARCD3-205ENST00000469154 TRAV12-3A0A0B4J271 114 aa10.58□□□□□ -0.72
SMARCD3-205ENST00000469154 TRBV6-5A0A0K0K1A5 114 aa10.58□□□□□ -0.72
SMARCD3-205ENST00000469154 F5H697 171 aa10.58□□□□□ -0.72
SMARCD3-205ENST00000469154 H3BMG7 143 aa10.58□□□□□ -0.72
SMARCD3-205ENST00000469154 WFDC2Q14508 124 aa10.58□□□□□ -0.72
SMARCD3-205ENST00000469154 GAGE13Q4V321 117 aa10.58□□□□□ -0.72
SMARCD3-205ENST00000469154 MORN3Q6PF18 240 aaPredicted RBP10.58□□□□□ -0.72
SMARCD3-205ENST00000469154 EDN2P20800 178 aa10.57□□□□□ -0.72
SMARCD3-205ENST00000469154 CD300EQ496F6 205 aaPredicted RBP10.57□□□□□ -0.72
SMARCD3-205ENST00000469154 PLEKHB2Q96CS7 222 aa10.57□□□□□ -0.72
SMARCD3-205ENST00000469154 C9orf85Q96MD7 179 aa10.57□□□□□ -0.72
SMARCD3-205ENST00000469154 JPT2Q9H910 190 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms