RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 CYP2G1PQ6ZSU1 146 aa-2.19□□□□□ -2.76
SSB-208ENST00000468600 COX7B2Q8TF08 81 aa-2.19□□□□□ -2.76
SSB-208ENST00000468600 DIRC1Q969H9 104 aa-2.19□□□□□ -2.76
SSB-208ENST00000468600 SIGMAR1Q99720 223 aa-2.19□□□□□ -2.76
SSB-208ENST00000468600 PBDC1Q9BVG4 233 aa-2.19□□□□□ -2.76
SSB-208ENST00000468600 MED11Q9P086 117 aa-2.19□□□□□ -2.76
SSB-208ENST00000468600 FAM135BQ49AJ0 1406 aa-2.19□□□□□ -2.76
SSB-208ENST00000468600 ANKRD50Q9ULJ7 1429 aa-2.19□□□□□ -2.76
SSB-208ENST00000468600 N4BP2Q86UW6 1770 aaPredicted RBP-2.2□□□□□ -2.76
SSB-208ENST00000468600 TMEM114B3SHH9 223 aa-2.2□□□□□ -2.76
SSB-208ENST00000468600 J3KT08 172 aa-2.2□□□□□ -2.76
SSB-208ENST00000468600 OR2H2O95918 312 aa-2.2□□□□□ -2.76
SSB-208ENST00000468600 MT-ND6P03923 174 aa-2.2□□□□□ -2.76
SSB-208ENST00000468600 SMIM6P0DI80 62 aa-2.2□□□□□ -2.76
SSB-208ENST00000468600 COX8AP10176 69 aa-2.2□□□□□ -2.76
SSB-208ENST00000468600 CCL3L1P16619 93 aa-2.2□□□□□ -2.76
SSB-208ENST00000468600 RPL35P42766 123 aaKnown RBP-2.2□□□□□ -2.76
SSB-208ENST00000468600 ERVS71-1P61550 626 aa-2.2□□□□□ -2.76
SSB-208ENST00000468600 CFAP126Q5VTH2 177 aa-2.2□□□□□ -2.76
SSB-208ENST00000468600 TEX29Q8N6K0 151 aa-2.2□□□□□ -2.76
SSB-208ENST00000468600 LLPHQ9BRT6 129 aaKnown RBP-2.2□□□□□ -2.76
SSB-208ENST00000468600 MPC1Q9Y5U8 109 aa-2.2□□□□□ -2.76
SSB-208ENST00000468600 ZFYVE9O95405 1425 aa-2.2□□□□□ -2.76
SSB-208ENST00000468600 NSD3Q9BZ95 1437 aa-2.2□□□□□ -2.76
SSB-208ENST00000468600 PAPPAQ13219 1627 aa-2.2□□□□□ -2.76
SSB-208ENST00000468600 SLIT1O75093 1534 aa-2.21□□□□□ -2.76
SSB-208ENST00000468600 TFF1P04155 84 aa-2.21□□□□□ -2.76
SSB-208ENST00000468600 POLR2JP52435 117 aaKnown RBP-2.21□□□□□ -2.76
SSB-208ENST00000468600 NCALDP61601 193 aa-2.21□□□□□ -2.76
SSB-208ENST00000468600 LSM6P62312 80 aaKnown RBP-2.21□□□□□ -2.76
SSB-208ENST00000468600 NUP210LQ5VU65 1888 aa-2.21□□□□□ -2.76
SSB-208ENST00000468600 CLEC2BQ92478 149 aa-2.21□□□□□ -2.76
SSB-208ENST00000468600 CCDC42Q96M95 316 aa-2.21□□□□□ -2.76
SSB-208ENST00000468600 VPS25Q9BRG1 176 aa-2.21□□□□□ -2.76
SSB-208ENST00000468600 LXNQ9BS40 222 aa-2.21□□□□□ -2.76
SSB-208ENST00000468600 DNAH7Q8WXX0 4024 aa-2.21□□□□□ -2.76
SSB-208ENST00000468600 AKAP11Q9UKA4 1901 aa-2.21□□□□□ -2.76
SSB-208ENST00000468600 SACSQ9NZJ4 4579 aa-2.21□□□□□ -2.76
SSB-208ENST00000468600 DOCK1Q14185 1865 aa-2.22□□□□□ -2.76
SSB-208ENST00000468600 C5orf58C9J3I9 102 aa-2.22□□□□□ -2.76
SSB-208ENST00000468600 IFNA21P01568 189 aa-2.22□□□□□ -2.76
SSB-208ENST00000468600 OGNP20774 298 aaKnown RBP-2.22□□□□□ -2.76
SSB-208ENST00000468600 GTF2A1P52655 376 aaPredicted RBP-2.22□□□□□ -2.76
SSB-208ENST00000468600 HSPE1P61604 102 aaKnown RBP-2.22□□□□□ -2.76
SSB-208ENST00000468600 DEFB123Q8N688 67 aa-2.22□□□□□ -2.76
SSB-208ENST00000468600 MCEEQ96PE7 176 aa-2.22□□□□□ -2.76
SSB-208ENST00000468600 NMNAT1Q9HAN9 279 aaPredicted RBP-2.22□□□□□ -2.76
SSB-208ENST00000468600 SRCAPQ6ZRS2 3230 aa-2.22□□□□□ -2.77
SSB-208ENST00000468600 LRP6O75581 1613 aa-2.23□□□□□ -2.77
SSB-208ENST00000468600 CPSF4LA6NMK7 179 aaKnown RBP-2.23□□□□□ -2.77
SSB-208ENST00000468600 EDF1O60869 148 aaKnown RBP-2.23□□□□□ -2.77
SSB-208ENST00000468600 C20orf197Q8N268 126 aa-2.23□□□□□ -2.77
SSB-208ENST00000468600 BRK1Q8WUW1 75 aa-2.23□□□□□ -2.77
SSB-208ENST00000468600 SMIM7Q9BQ49 75 aa-2.23□□□□□ -2.77
SSB-208ENST00000468600 ITPR2Q14571 2701 aa-2.23□□□□□ -2.77
SSB-208ENST00000468600 PDE4DIPQ5VU43 2346 aa-2.23□□□□□ -2.77
SSB-208ENST00000468600 CD109Q6YHK3 1445 aa-2.24□□□□□ -2.77
SSB-208ENST00000468600 COL4A6Q14031 1691 aa-2.24□□□□□ -2.77
SSB-208ENST00000468600 USP54Q70EL1 1684 aa-2.24□□□□□ -2.77
SSB-208ENST00000468600 FAM92AA1XBS5 289 aa-2.24□□□□□ -2.77
SSB-208ENST00000468600 TMEM210A6NLX4 147 aa-2.24□□□□□ -2.77
SSB-208ENST00000468600 OR8B8Q15620 311 aa-2.24□□□□□ -2.77
SSB-208ENST00000468600 Q5VV11 94 aa-2.24□□□□□ -2.77
SSB-208ENST00000468600 OR8J2Q8NGG1 315 aa-2.24□□□□□ -2.77
SSB-208ENST00000468600 ZMYM4Q5VZL5 1548 aa-2.24□□□□□ -2.77
SSB-208ENST00000468600 KDM3BQ7LBC6 1761 aa-2.24□□□□□ -2.77
SSB-208ENST00000468600 APOBP04114 4563 aaKnown RBP-2.24□□□□□ -2.77
SSB-208ENST00000468600 PIK3C2AO00443 1686 aa-2.25□□□□□ -2.77
SSB-208ENST00000468600 A0A1B0GW64 132 aa-2.25□□□□□ -2.77
SSB-208ENST00000468600 H0YJX3 145 aa-2.25□□□□□ -2.77
SSB-208ENST00000468600 M0QX08 132 aa-2.25□□□□□ -2.77
SSB-208ENST00000468600 ARF6P62330 175 aa-2.25□□□□□ -2.77
SSB-208ENST00000468600 KRTAP20-1Q3LI63 56 aa-2.25□□□□□ -2.77
SSB-208ENST00000468600 BTF3L4Q96K17 158 aa-2.25□□□□□ -2.77
SSB-208ENST00000468600 IL20Q9NYY1 176 aa-2.25□□□□□ -2.77
SSB-208ENST00000468600 EYSQ5T1H1 3165 aa-2.25□□□□□ -2.77
SSB-208ENST00000468600 FRYQ5TBA9 3013 aa-2.26□□□□□ -2.77
SSB-208ENST00000468600 KPNA4O00629 521 aaPredicted RBP-2.26□□□□□ -2.77
SSB-208ENST00000468600 RPP14O95059 124 aaKnown RBP-2.26□□□□□ -2.77
SSB-208ENST00000468600 NDUFC2O95298 119 aa-2.26□□□□□ -2.77
SSB-208ENST00000468600 IFNA6P05013 189 aa-2.26□□□□□ -2.77
SSB-208ENST00000468600 TPM3P06753 285 aa-2.26□□□□□ -2.77
SSB-208ENST00000468600 RPS17P08708 135 aaKnown RBP-2.26□□□□□ -2.77
SSB-208ENST00000468600 SAA1P0DJI8 122 aaPredicted RBP-2.26□□□□□ -2.77
SSB-208ENST00000468600 SCGB2B2Q4G0G5 96 aa-2.26□□□□□ -2.77
SSB-208ENST00000468600 BAGE3Q86Y29 109 aa-2.26□□□□□ -2.77
SSB-208ENST00000468600 WFDC6Q9BQY6 131 aa-2.26□□□□□ -2.77
SSB-208ENST00000468600 FKBP11Q9NYL4 201 aa-2.26□□□□□ -2.77
SSB-208ENST00000468600 FAM32AQ9Y421 112 aaKnown RBP-2.26□□□□□ -2.77
SSB-208ENST00000468600 C5orf42Q9H799 3197 aa-2.26□□□□□ -2.77
SSB-208ENST00000468600 REV3LO60673 3130 aa-2.26□□□□□ -2.77
SSB-208ENST00000468600 GAPVD1Q14C86 1478 aa-2.26□□□□□ -2.77
SSB-208ENST00000468600 ADAMTS12P58397 1594 aa-2.27□□□□□ -2.77
SSB-208ENST00000468600 PTPN23Q9H3S7 1636 aa-2.27□□□□□ -2.77
SSB-208ENST00000468600 KNDC1Q76NI1 1749 aa-2.27□□□□□ -2.77
SSB-208ENST00000468600 EDDM3BP56851 147 aa-2.27□□□□□ -2.77
SSB-208ENST00000468600 OR2T2Q6IF00 324 aa-2.27□□□□□ -2.77
SSB-208ENST00000468600 PAIP2Q9BPZ3 127 aaKnown RBP-2.27□□□□□ -2.77
SSB-208ENST00000468600 NAA60Q9H7X0 242 aa-2.27□□□□□ -2.77
SSB-208ENST00000468600 RIIAD1A6NNX1 92 aa-2.28□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms