RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 SLIT3O75094 1523 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 PTPRMP28827 1452 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 IGHV3OR16-8A0A075B7F1 116 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 IGKV3D-11A0A0A0MRZ8 115 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 TCRBV4S1A1TA0A5B7 111 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 CCL16O15467 120 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 NDUFC1O43677 76 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 TFF1P04155 84 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 IGKV3-11P04433 115 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 WFDC2Q14508 124 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 SPATA45Q537H7 98 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 LINC00483Q53H64 154 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 NMSQ5H8A3 153 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 KPRPQ5T749 579 aaPredicted RBP2.28□□□□□ -2.04
CDHR3-206ENST00000468477 HEPN1Q6WQI6 88 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 KRTAP7-1Q8IUC3 87 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 Q8TAT8 98 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 NDUFB11Q9NX14 153 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 KLK12Q9UKR0 248 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 S4R3C0 116 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 UBR1Q8IWV7 1749 aa2.28□□□□□ -2.05
CDHR3-206ENST00000468477 CDC42BPBQ9Y5S2 1711 aa2.28□□□□□ -2.05
CDHR3-206ENST00000468477 CFAP74Q9C0B2 1584 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 ATP10BO94823 1461 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 COL1A2P08123 1366 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 IGLV2-18A0A075B6J9 118 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 ODF3BA8MYP8 253 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 HCG22E2RYF7 251 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 H3BUT2 72 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 CXCL8P10145 99 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 ERHP84090 104 aaKnown RBP2.27□□□□□ -2.05
CDHR3-206ENST00000468477 ZNF79Q15937 498 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 MPV17LQ2QL34 196 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 C2orf82Q6UX34 121 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 SH2D6Q7Z4S9 175 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 CLECL1Q8IZS7 167 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 MANBALQ9NQG1 85 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 SMAD5-AS1Q9Y6J3 95 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 MADDQ8WXG6 1647 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 CUL9Q8IWT3 2517 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 MICAL3Q7RTP6 2002 aa2.27□□□□□ -2.05
CDHR3-206ENST00000468477 COL2A1P02458 1487 aaPredicted RBP2.26□□□□□ -2.05
CDHR3-206ENST00000468477 NCOA2Q15596 1464 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 MLH3Q9UHC1 1453 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 TMSB15BA0A087X1C1 80 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 MUC21A0A140T8X8 626 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 KANTRA0A1W2PQU2 76 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 PSCAO43653 123 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 NDPQ00604 133 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 ZNF791Q3KP31 576 aaPredicted RBP2.26□□□□□ -2.05
CDHR3-206ENST00000468477 CYP2G1PQ6ZSU1 146 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 HIGD2AQ9BW72 106 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 CYP4F30PQ9H0H9 118 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 ABCC2Q92887 1545 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 FREM3P0C091 2139 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 MED12LQ86YW9 2145 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 RGPD8O14715 1765 aaPredicted RBP2.26□□□□□ -2.05
CDHR3-206ENST00000468477 LAMB2P55268 1798 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 RGPD5Q99666 1765 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 MPDZO75970 2070 aa2.26□□□□□ -2.05
CDHR3-206ENST00000468477 TOP2BQ02880 1626 aa2.25□□□□□ -2.05
CDHR3-206ENST00000468477 UNC13BO14795 1591 aa2.25□□□□□ -2.05
CDHR3-206ENST00000468477 SETBP1Q9Y6X0 1596 aa2.25□□□□□ -2.05
CDHR3-206ENST00000468477 TRBV7-1A0A0A6YYK4 115 aa2.25□□□□□ -2.05
CDHR3-206ENST00000468477 TRAV12-1A0A0B4J245 112 aa2.25□□□□□ -2.05
CDHR3-206ENST00000468477 P0C880 135 aa2.25□□□□□ -2.05
CDHR3-206ENST00000468477 PMCHL1Q16048 86 aa2.25□□□□□ -2.05
CDHR3-206ENST00000468477 SCRT1Q9BWW7 348 aa2.25□□□□□ -2.05
CDHR3-206ENST00000468477 GFRA4Q9GZZ7 299 aa2.25□□□□□ -2.05
CDHR3-206ENST00000468477 CYSTM1Q9H1C7 97 aa2.25□□□□□ -2.05
CDHR3-206ENST00000468477 HEATR1Q9H583 2144 aaKnown RBP2.25□□□□□ -2.05
CDHR3-206ENST00000468477 CDC42SE1Q9NRR8 79 aa2.25□□□□□ -2.05
CDHR3-206ENST00000468477 HEATR5BQ9P2D3 2071 aa2.25□□□□□ -2.05
CDHR3-206ENST00000468477 BLMP54132 1417 aaPredicted RBP2.25□□□□□ -2.05
CDHR3-206ENST00000468477 STRCP1A6NGW2 1772 aa2.24□□□□□ -2.05
CDHR3-206ENST00000468477 RGPD2P0DJD1 1756 aa2.24□□□□□ -2.05
CDHR3-206ENST00000468477 ARFGEF2Q9Y6D5 1785 aa2.24□□□□□ -2.05
CDHR3-206ENST00000468477 IGLV3-16A0A075B6K0 115 aa2.24□□□□□ -2.05
CDHR3-206ENST00000468477 A0A0G2JND7 137 aa2.24□□□□□ -2.05
CDHR3-206ENST00000468477 KRTAP10-12P60413 245 aa2.24□□□□□ -2.05
CDHR3-206ENST00000468477 SPINT4Q6UDR6 99 aa2.24□□□□□ -2.05
CDHR3-206ENST00000468477 ZNF833PQ6ZTB9 187 aa2.24□□□□□ -2.05
CDHR3-206ENST00000468477 RPS10P5Q9NQ39 176 aa2.24□□□□□ -2.05
CDHR3-206ENST00000468477 HIGD1BQ9P298 99 aa2.24□□□□□ -2.05
CDHR3-206ENST00000468477 PRO0461Q9UI25 63 aa2.24□□□□□ -2.05
CDHR3-206ENST00000468477 LHFPL6Q9Y693 200 aa2.24□□□□□ -2.05
CDHR3-206ENST00000468477 PDCD11Q14690 1871 aaKnown RBP2.24□□□□□ -2.05
CDHR3-206ENST00000468477 PREX2Q70Z35 1606 aa2.24□□□□□ -2.05
CDHR3-206ENST00000468477 MAP2P11137 1827 aaKnown RBP2.24□□□□□ -2.05
CDHR3-206ENST00000468477 LTBP2Q14767 1821 aa2.24□□□□□ -2.05
CDHR3-206ENST00000468477 KDM3BQ7LBC6 1761 aa2.23□□□□□ -2.05
CDHR3-206ENST00000468477 RP1P56715 2156 aa2.23□□□□□ -2.05
CDHR3-206ENST00000468477 CUX1P39880 1505 aa2.23□□□□□ -2.05
CDHR3-206ENST00000468477 CDK13Q14004 1512 aaKnown RBP2.23□□□□□ -2.05
CDHR3-206ENST00000468477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.23□□□□□ -2.05
CDHR3-206ENST00000468477 DUOX2Q9NRD8 1548 aa2.23□□□□□ -2.05
CDHR3-206ENST00000468477 DLG5Q8TDM6 1919 aa2.23□□□□□ -2.05
CDHR3-206ENST00000468477 PLA2R1Q13018 1463 aa2.23□□□□□ -2.05
CDHR3-206ENST00000468477 TMEM30CPA0ZSE6 113 aa2.23□□□□□ -2.05
CDHR3-206ENST00000468477 SNRPFP62306 86 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms