RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 TRAV8-6A0A0B4J262 113 aa7.81□□□□□ -1.16
CDHR3-205ENST00000468143 A0A1B0GVG6 124 aa7.81□□□□□ -1.16
CDHR3-205ENST00000468143 IGHV3-30P01768 117 aa7.81□□□□□ -1.16
CDHR3-205ENST00000468143 IGHV3-33P01772 117 aa7.81□□□□□ -1.16
CDHR3-205ENST00000468143 CRYGDP07320 174 aa7.81□□□□□ -1.16
CDHR3-205ENST00000468143 IGHV3-30-3P0DP02 117 aa7.81□□□□□ -1.16
CDHR3-205ENST00000468143 IGHV3-30-5P0DP03 117 aa7.81□□□□□ -1.16
CDHR3-205ENST00000468143 FUSP35637 526 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDHR3-205ENST00000468143 TIRAPP58753 221 aa7.81□□□□□ -1.16
CDHR3-205ENST00000468143 KRTAP10-2P60368 255 aa7.81□□□□□ -1.16
CDHR3-205ENST00000468143 CENPWQ5EE01 88 aa7.81□□□□□ -1.16
CDHR3-205ENST00000468143 ZFP82Q8N141 532 aa7.81□□□□□ -1.16
CDHR3-205ENST00000468143 OR10AG1Q8NH19 301 aa7.81□□□□□ -1.16
CDHR3-205ENST00000468143 GTSF1LQ9H1H1 148 aa7.81□□□□□ -1.16
CDHR3-205ENST00000468143 MED9Q9NWA0 146 aa7.81□□□□□ -1.16
CDHR3-205ENST00000468143 MSRB1Q9NZV6 116 aa7.81□□□□□ -1.16
CDHR3-205ENST00000468143 IFNA1P01562 189 aa7.8□□□□□ -1.16
CDHR3-205ENST00000468143 MEF2BQ02080 365 aaPredicted RBP7.8□□□□□ -1.16
CDHR3-205ENST00000468143 LELP1Q5T871 98 aa7.8□□□□□ -1.16
CDHR3-205ENST00000468143 ALKAL2Q6UX46 152 aa7.8□□□□□ -1.16
CDHR3-205ENST00000468143 RHODO00212 210 aa7.79□□□□□ -1.16
CDHR3-205ENST00000468143 IGLV2-8P01709 118 aa7.79□□□□□ -1.16
CDHR3-205ENST00000468143 GZMBP10144 247 aa7.79□□□□□ -1.16
CDHR3-205ENST00000468143 BCL2P10415 239 aa7.79□□□□□ -1.16
CDHR3-205ENST00000468143 NKX2-5P52952 324 aaPredicted RBP7.79□□□□□ -1.16
CDHR3-205ENST00000468143 NFE4Q86UQ8 179 aa7.79□□□□□ -1.16
CDHR3-205ENST00000468143 VAX2Q9UIW0 290 aa7.79□□□□□ -1.16
CDHR3-205ENST00000468143 PDE6DO43924 150 aa7.78□□□□□ -1.16
CDHR3-205ENST00000468143 LINC00694P0DN24 101 aa7.78□□□□□ -1.16
CDHR3-205ENST00000468143 GNG4P50150 75 aa7.78□□□□□ -1.16
CDHR3-205ENST00000468143 LINC01556Q5JQF7 62 aa7.78□□□□□ -1.16
CDHR3-205ENST00000468143 SPANXN1Q5VSR9 72 aa7.78□□□□□ -1.16
CDHR3-205ENST00000468143 Q8N3U1 123 aa7.78□□□□□ -1.16
CDHR3-205ENST00000468143 DAZAP1Q96EP5 407 aaKnown RBP7.78□□□□□ -1.16
CDHR3-205ENST00000468143 TPPP3Q9BW30 176 aa7.78□□□□□ -1.16
CDHR3-205ENST00000468143 SSBP4Q9BWG4 385 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-205ENST00000468143 BOLA1Q9Y3E2 137 aa7.78□□□□□ -1.16
CDHR3-205ENST00000468143 TRBV20OR9-2A0A075B6H5 130 aa7.77□□□□□ -1.17
CDHR3-205ENST00000468143 RBFOX3A6NFN3 312 aa7.77□□□□□ -1.17
CDHR3-205ENST00000468143 K7EP13 123 aa7.77□□□□□ -1.17
CDHR3-205ENST00000468143 SNAI2O43623 268 aa7.77□□□□□ -1.17
CDHR3-205ENST00000468143 CXCL1P09341 107 aa7.77□□□□□ -1.17
CDHR3-205ENST00000468143 ERVFC1-1P60608 527 aa7.77□□□□□ -1.17
CDHR3-205ENST00000468143 C10orf126Q8N4M7 172 aa7.77□□□□□ -1.17
CDHR3-205ENST00000468143 OR2D3Q8NGH3 330 aa7.77□□□□□ -1.17
CDHR3-205ENST00000468143 Q9HAA7 133 aa7.77□□□□□ -1.17
CDHR3-205ENST00000468143 A0A087WTM6 91 aa7.76□□□□□ -1.17
CDHR3-205ENST00000468143 C19orf71A6NCJ1 209 aa7.76□□□□□ -1.17
CDHR3-205ENST00000468143 IBA57-AS1B1ANH7 110 aa7.76□□□□□ -1.17
CDHR3-205ENST00000468143 F5H697 171 aa7.76□□□□□ -1.17
CDHR3-205ENST00000468143 OR5AL1P0C617 328 aa7.76□□□□□ -1.17
CDHR3-205ENST00000468143 ZNF56Q15929 161 aa7.76□□□□□ -1.17
CDHR3-205ENST00000468143 EREGO14944 169 aa7.75□□□□□ -1.17
CDHR3-205ENST00000468143 PSCAO43653 123 aa7.75□□□□□ -1.17
CDHR3-205ENST00000468143 RAB4BP61018 213 aa7.75□□□□□ -1.17
CDHR3-205ENST00000468143 BLOC1S1P78537 153 aa7.75□□□□□ -1.17
CDHR3-205ENST00000468143 RPL36AP83881 106 aaKnown RBP7.75□□□□□ -1.17
CDHR3-205ENST00000468143 DAZ4Q86SG3 579 aaKnown RBP7.75□□□□□ -1.17
CDHR3-205ENST00000468143 FER1L6-AS1Q8NA97 138 aa7.75□□□□□ -1.17
CDHR3-205ENST00000468143 RPL36ALQ969Q0 106 aaKnown RBP7.75□□□□□ -1.17
CDHR3-205ENST00000468143 DAZ3Q9NR90 486 aaKnown RBP7.75□□□□□ -1.17
CDHR3-205ENST00000468143 P01737 135 aa7.74□□□□□ -1.17
CDHR3-205ENST00000468143 IGLC6P0CF74 106 aa7.74□□□□□ -1.17
CDHR3-205ENST00000468143 TAGLN2P37802 199 aaKnown RBP7.74□□□□□ -1.17
CDHR3-205ENST00000468143 RPS20P60866 119 aaKnown RBP7.74□□□□□ -1.17
CDHR3-205ENST00000468143 NUDT10Q8NFP7 164 aa7.74□□□□□ -1.17
CDHR3-205ENST00000468143 OCC1Q8TAD7 63 aa7.74□□□□□ -1.17
CDHR3-205ENST00000468143 SMIM12Q96EX1 92 aa7.74□□□□□ -1.17
CDHR3-205ENST00000468143 NUDT11Q96G61 164 aa7.74□□□□□ -1.17
CDHR3-205ENST00000468143 PGPEP1Q9NXJ5 209 aa7.74□□□□□ -1.17
CDHR3-205ENST00000468143 PKHD1P08F94 4074 aa7.74□□□□□ -1.17
CDHR3-205ENST00000468143 TRBV7-3A0A075B6L6 115 aa7.73□□□□□ -1.17
CDHR3-205ENST00000468143 A0A087WWC5 75 aa7.73□□□□□ -1.17
CDHR3-205ENST00000468143 TRBV10-1A0A0K0K1A3 114 aa7.73□□□□□ -1.17
CDHR3-205ENST00000468143 SMIM17P0DL12 118 aa7.73□□□□□ -1.17
CDHR3-205ENST00000468143 CEBPGP53567 150 aa7.73□□□□□ -1.17
CDHR3-205ENST00000468143 UBE2D3P61077 147 aa7.73□□□□□ -1.17
CDHR3-205ENST00000468143 UBE2D2P62837 147 aa7.73□□□□□ -1.17
CDHR3-205ENST00000468143 NEXN-AS1Q8NBZ9 246 aa7.73□□□□□ -1.17
CDHR3-205ENST00000468143 RNASE7Q9H1E1 156 aaKnown RBP7.73□□□□□ -1.17
CDHR3-205ENST00000468143 KIF25-AS1Q9Y6Z4 181 aa7.73□□□□□ -1.17
CDHR3-205ENST00000468143 K7EN84 100 aa7.72□□□□□ -1.17
CDHR3-205ENST00000468143 MGPP08493 103 aa7.72□□□□□ -1.17
CDHR3-205ENST00000468143 LYZL1Q6UWQ5 148 aa7.72□□□□□ -1.17
CDHR3-205ENST00000468143 BIN3Q9NQY0 253 aa7.72□□□□□ -1.17
CDHR3-205ENST00000468143 RYR1P21817 5038 aa7.72□□□□□ -1.17
CDHR3-205ENST00000468143 XKRY2A2RUG3 117 aa7.71□□□□□ -1.18
CDHR3-205ENST00000468143 LRCOL1A6NCL2 159 aa7.71□□□□□ -1.18
CDHR3-205ENST00000468143 CDK2AP2O75956 126 aa7.71□□□□□ -1.18
CDHR3-205ENST00000468143 NIT1Q86X76 327 aa7.71□□□□□ -1.18
CDHR3-205ENST00000468143 OR10G8Q8NGN5 311 aa7.71□□□□□ -1.18
CDHR3-205ENST00000468143 LYPD6BQ8NI32 183 aa7.71□□□□□ -1.18
CDHR3-205ENST00000468143 DNAJC30Q96LL9 226 aa7.71□□□□□ -1.18
CDHR3-205ENST00000468143 AP1S3Q96PC3 154 aa7.71□□□□□ -1.18
CDHR3-205ENST00000468143 KRTAP4-5Q9BYR2 181 aa7.71□□□□□ -1.18
CDHR3-205ENST00000468143 URGCP-MRPS24S4R325 110 aa7.71□□□□□ -1.18
CDHR3-205ENST00000468143 TMEM262E9PQX1 116 aa7.7□□□□□ -1.18
CDHR3-205ENST00000468143 F2Z2F3 143 aa7.7□□□□□ -1.18
CDHR3-205ENST00000468143 NTF3P20783 257 aa7.7□□□□□ -1.18
CDHR3-205ENST00000468143 CACNG7P62955 275 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms