RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 ZNF292O60281 2723 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 TRAV40A0A0B4J280 105 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 IGHV3-35A0A0C4DH35 117 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 IGHV3-66A0A0C4DH42 116 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 TRBV6-5A0A0K0K1A5 114 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 MYMXA0A1B0GTQ4 84 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 A0A1B0GWB2 263 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 LINC01548A6NM66 108 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 H3BVH4 76 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 LGALS9O00182 355 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 TSPAN13O95857 204 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 IGHV4-39P01824 125 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 MSMBP08118 114 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 CRYBA4P53673 196 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 SNRPD3P62318 126 aaKnown RBP3.93□□□□□ -1.78
RIF1-209ENST00000467762 RHOHQ15669 191 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 FOXI2Q6ZQN5 318 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 Q6ZVH6 145 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 GTSCR1Q86UQ5 136 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 PRR26Q8N8Z3 221 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 RASL10AQ92737 203 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 HIST1H4GQ99525 98 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 KIR2DL4Q99706 377 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 CCL19Q99731 98 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 RHPN1-AS1Q9BWJ2 59 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 ARHGAP32A7KAX9 2087 aa3.93□□□□□ -1.78
RIF1-209ENST00000467762 ZFHX4Q86UP3 3567 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 APC2O95996 2303 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 ROS1P08922 2347 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 IGHV3OR16-8A0A075B7F1 116 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 TRAV2A0A0B4J234 112 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 A0A1W2PPR1 153 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 M0QXV9 152 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 IGHV4-31P0DP07 118 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 SCGB1A1P11684 91 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 RNASE4P34096 147 aaKnown RBP3.92□□□□□ -1.78
RIF1-209ENST00000467762 RIPPLY3P57055 190 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 FXYD7P58549 80 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 PMVKQ15126 192 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 C12orf74Q32Q52 190 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 C2orf66Q6UXQ4 117 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 MTURNQ8N3F0 131 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 PTH2Q96A98 100 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 CSTL1Q9H114 145 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 EDA2RQ9HAV5 297 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 KIF25-AS1Q9Y6Z4 181 aa3.92□□□□□ -1.78
RIF1-209ENST00000467762 RP1L1Q8IWN7 2480 aaPredicted RBP3.92□□□□□ -1.78
RIF1-209ENST00000467762 ABCA1O95477 2261 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 TRBV7-3A0A075B6L6 115 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 A0A087WZ39 114 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 IGKV2D-26A0A0A0MRZ7 120 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 TRBV27A0A0K0K1C4 114 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 IGLL5B9A064 214 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 H3BUX3 64 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 GAGE7O76087 117 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 GAGE12FP0CL80 117 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 GAGE12GP0CL81 117 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 GAGE12IP0CL82 117 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 RNASE3P12724 160 aaKnown RBP3.91□□□□□ -1.78
RIF1-209ENST00000467762 POLR2KP53803 58 aaKnown RBP3.91□□□□□ -1.78
RIF1-209ENST00000467762 GAGE4Q13068 117 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 UNQ9165/PRO28630Q6UXU0 137 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 TMEM219Q86XT9 240 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 C14orf178Q8N769 122 aaPredicted RBP3.91□□□□□ -1.78
RIF1-209ENST00000467762 MAPKAPK5-AS1Q8N8E1 139 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 BAALCQ8WXS3 180 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 RETNQ9HD89 108 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 SPANXB1Q9NS25 103 aaPredicted RBP3.91□□□□□ -1.78
RIF1-209ENST00000467762 TP73-AS1Q9UF72 201 aa3.91□□□□□ -1.78
RIF1-209ENST00000467762 SPENQ96T58 3664 aaKnown RBP3.91□□□□□ -1.78
RIF1-209ENST00000467762 ANKHD1Q8IWZ3 2542 aaKnown RBP3.9□□□□□ -1.78
RIF1-209ENST00000467762 PIEZO2Q9H5I5 2752 aa3.9□□□□□ -1.78
RIF1-209ENST00000467762 TRBV20-1A0A075B6N2 111 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 IGHV3OR16-13A0A075B7E8 117 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 IGHV3-49A0A0A0MS15 119 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 IGHV3-74A0A0B4J1X5 117 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 IGHV4-28A0A0C4DH34 117 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 IGHV4-61A0A0C4DH41 118 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 IGIPA6NJ69 53 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 C11orf86A6NJI1 115 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 GAS8-AS1O95177 125 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 MGPP08493 103 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 PSMB8P28062 276 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 FXYD2P54710 66 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 RRN3P1Q2M238 152 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 PRR9Q5T870 116 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 ZFP2Q6ZN57 461 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 Q6ZSV7 163 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 Q6ZVQ6 151 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 TRPT1Q86TN4 253 aaKnown RBP3.9□□□□□ -1.79
RIF1-209ENST00000467762 TEX29Q8N6K0 151 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 ATP6V0E2Q8NHE4 81 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 DCANP1Q8TF63 244 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 RAB37Q96AX2 223 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 C9orf85Q96MD7 179 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 NHP2Q9NX24 153 aaKnown RBP3.9□□□□□ -1.79
RIF1-209ENST00000467762 ZNF256Q9Y2P7 627 aaPredicted RBP3.9□□□□□ -1.79
RIF1-209ENST00000467762 LOC400499M0QZD8 3231 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 NBEAQ8NFP9 2946 aa3.9□□□□□ -1.79
RIF1-209ENST00000467762 MUC3AQ02505 3323 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms