RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 CYSTM1Q9H1C7 97 aa8.43□□□□□ -1.06
SFXN3-204ENST00000466982 TRAV12-1A0A0B4J245 112 aa8.42□□□□□ -1.06
SFXN3-204ENST00000466982 SIRPDQ9H106 197 aa8.42□□□□□ -1.06
SFXN3-204ENST00000466982 DCHS2Q6V1P9 2916 aa8.42□□□□□ -1.06
SFXN3-204ENST00000466982 H7C2G1 150 aa8.42□□□□□ -1.06
SFXN3-204ENST00000466982 J3QQQ9 107 aa8.42□□□□□ -1.06
SFXN3-204ENST00000466982 PFN2P35080 140 aa8.42□□□□□ -1.06
SFXN3-204ENST00000466982 ARHGAP32A7KAX9 2087 aa8.41□□□□□ -1.06
SFXN3-204ENST00000466982 LRBAP50851 2863 aa8.41□□□□□ -1.06
SFXN3-204ENST00000466982 TRAV13-1A0A0B4J241 112 aa8.41□□□□□ -1.06
SFXN3-204ENST00000466982 IGHV7-4-1A0A0J9YVY3 117 aa8.41□□□□□ -1.06
SFXN3-204ENST00000466982 A0A0J9YY99 117 aa8.41□□□□□ -1.06
SFXN3-204ENST00000466982 F8W735 103 aaPredicted RBP8.41□□□□□ -1.06
SFXN3-204ENST00000466982 COX7A1P24310 79 aa8.41□□□□□ -1.06
SFXN3-204ENST00000466982 FAM27E3Q08E93 113 aa8.41□□□□□ -1.06
SFXN3-204ENST00000466982 RPL39LQ96EH5 51 aaKnown RBP8.41□□□□□ -1.06
SFXN3-204ENST00000466982 SMIM2Q9BVW6 85 aa8.41□□□□□ -1.06
SFXN3-204ENST00000466982 FAM236DA0A1B0GTK5 79 aa8.4□□□□□ -1.06
SFXN3-204ENST00000466982 A0A1W2PRX2 142 aa8.4□□□□□ -1.06
SFXN3-204ENST00000466982 ELANEP08246 267 aa8.4□□□□□ -1.06
SFXN3-204ENST00000466982 FAM236CP0DP71 79 aa8.4□□□□□ -1.06
SFXN3-204ENST00000466982 C8orf31Q8N9H6 132 aa8.4□□□□□ -1.06
SFXN3-204ENST00000466982 IGHV3-66A0A0C4DH42 116 aa8.4□□□□□ -1.06
SFXN3-204ENST00000466982 LY6LH3BQJ8 138 aa8.4□□□□□ -1.06
SFXN3-204ENST00000466982 EIF4EBP3O60516 100 aaPredicted RBP8.4□□□□□ -1.06
SFXN3-204ENST00000466982 TSPEAR-AS2P59090 65 aa8.4□□□□□ -1.06
SFXN3-204ENST00000466982 LINC01620Q4KN68 170 aa8.4□□□□□ -1.06
SFXN3-204ENST00000466982 C1orf195Q5TG92 126 aa8.4□□□□□ -1.06
SFXN3-204ENST00000466982 C9orf85Q96MD7 179 aa8.4□□□□□ -1.06
SFXN3-204ENST00000466982 IGHV3OR16-13A0A075B7E8 117 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 IGHV3-74A0A0B4J1X5 117 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 TMEM178BH3BS89 294 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 SPANXN1Q5VSR9 72 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 MBD3L2Q8NHZ7 208 aaPredicted RBP8.39□□□□□ -1.07
SFXN3-204ENST00000466982 TOMM6Q96B49 74 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 SPTBN4Q9H254 2564 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 TRBV10-2A0A0K0K1G8 114 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 IGHV3-30P01768 117 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 IGHV3-30-5P0DP03 117 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 TMEM170BQ5T4T1 132 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 C2orf66Q6UXQ4 117 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 RNF152Q8N8N0 203 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 FDCSPQ8NFU4 85 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 PIEZO1Q92508 2521 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 ABCA4P78363 2273 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 C11orf86A6NJI1 115 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 BUB1B-PAK6H3BSN5 160 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 NBR2O15453 112 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 IGLV1-47P01700 117 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 KLRB1Q12918 225 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 FANCD2OSQ96PS1 177 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 PRO1854Q9UHT4 67 aa8.39□□□□□ -1.07
SFXN3-204ENST00000466982 ASH1LQ9NR48 2969 aaKnown RBP8.38□□□□□ -1.07
SFXN3-204ENST00000466982 C17orf100A8MU93 164 aa8.38□□□□□ -1.07
SFXN3-204ENST00000466982 DEFB121Q5J5C9 76 aa8.38□□□□□ -1.07
SFXN3-204ENST00000466982 AGPAT4-IT1Q9H0P7 198 aa8.38□□□□□ -1.07
SFXN3-204ENST00000466982 P0DMU3 169 aa8.38□□□□□ -1.07
SFXN3-204ENST00000466982 FAM231AP0DMU4 169 aa8.38□□□□□ -1.07
SFXN3-204ENST00000466982 FAM231CP0DMU5 169 aa8.38□□□□□ -1.07
SFXN3-204ENST00000466982 ZNF22P17026 224 aaPredicted RBP8.38□□□□□ -1.07
SFXN3-204ENST00000466982 HERVK_113P61574 105 aa8.38□□□□□ -1.07
SFXN3-204ENST00000466982 TMEM190Q8WZ59 177 aa8.38□□□□□ -1.07
SFXN3-204ENST00000466982 SUMO2P61956 95 aaKnown RBP8.37□□□□□ -1.07
SFXN3-204ENST00000466982 ATXN8Q156A1 80 aa8.37□□□□□ -1.07
SFXN3-204ENST00000466982 C14orf178Q8N769 122 aaPredicted RBP8.37□□□□□ -1.07
SFXN3-204ENST00000466982 TRAV41A0A0B4J266 112 aa8.36□□□□□ -1.07
SFXN3-204ENST00000466982 M0R381 172 aa8.36□□□□□ -1.07
SFXN3-204ENST00000466982 AKAP13Q12802 2813 aa8.36□□□□□ -1.07
SFXN3-204ENST00000466982 MED13LQ71F56 2210 aa8.36□□□□□ -1.07
SFXN3-204ENST00000466982 IGHV3-49A0A0A0MS15 119 aa8.36□□□□□ -1.07
SFXN3-204ENST00000466982 IGHV4-39P01824 125 aa8.36□□□□□ -1.07
SFXN3-204ENST00000466982 ORMDL2Q53FV1 153 aa8.36□□□□□ -1.07
SFXN3-204ENST00000466982 DPH3P1Q9H4G8 78 aa8.36□□□□□ -1.07
SFXN3-204ENST00000466982 BEX4Q9NWD9 120 aaPredicted RBP8.36□□□□□ -1.07
SFXN3-204ENST00000466982 IGLV4-69A0A075B6H9 119 aa8.35□□□□□ -1.07
SFXN3-204ENST00000466982 RNF223E7ERA6 249 aa8.35□□□□□ -1.07
SFXN3-204ENST00000466982 ATOX1O00244 68 aa8.35□□□□□ -1.07
SFXN3-204ENST00000466982 TSHBP01222 138 aa8.35□□□□□ -1.07
SFXN3-204ENST00000466982 C10orf105Q8TEF2 133 aa8.35□□□□□ -1.07
SFXN3-204ENST00000466982 CEP295Q9C0D2 2601 aa8.35□□□□□ -1.07
SFXN3-204ENST00000466982 IGF1P05019 195 aa8.35□□□□□ -1.07
SFXN3-204ENST00000466982 CTSGP08311 255 aa8.35□□□□□ -1.07
SFXN3-204ENST00000466982 CXCL5P42830 114 aa8.35□□□□□ -1.07
SFXN3-204ENST00000466982 C2orf82Q6UX34 121 aa8.35□□□□□ -1.07
SFXN3-204ENST00000466982 C5orf38Q86SI9 138 aa8.35□□□□□ -1.07
SFXN3-204ENST00000466982 SLC25A29Q8N8R3 303 aa8.35□□□□□ -1.07
SFXN3-204ENST00000466982 IGLV11-55A0A075B6I3 123 aa8.34□□□□□ -1.07
SFXN3-204ENST00000466982 ACYP1P07311 99 aa8.34□□□□□ -1.07
SFXN3-204ENST00000466982 C6orf226Q5I0X4 101 aa8.34□□□□□ -1.07
SFXN3-204ENST00000466982 METTL26Q96S19 204 aa8.34□□□□□ -1.07
SFXN3-204ENST00000466982 IGHV3-33P01772 117 aa8.34□□□□□ -1.07
SFXN3-204ENST00000466982 HIST1H4AP62805 103 aaKnown RBP8.34□□□□□ -1.07
SFXN3-204ENST00000466982 NDPQ00604 133 aa8.34□□□□□ -1.07
SFXN3-204ENST00000466982 PRR9Q5T870 116 aa8.34□□□□□ -1.07
SFXN3-204ENST00000466982 LINC00643Q86TS7 51 aa8.34□□□□□ -1.07
SFXN3-204ENST00000466982 A0A0G2JNJ9 132 aa8.33□□□□□ -1.08
SFXN3-204ENST00000466982 LYNX1G3V0Z9 82 aa8.33□□□□□ -1.08
SFXN3-204ENST00000466982 MGPP08493 103 aa8.33□□□□□ -1.08
SFXN3-204ENST00000466982 LYNX1P0DP58 116 aa8.33□□□□□ -1.08
SFXN3-204ENST00000466982 UPK3BQ9BT76 320 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms