RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 POM121L12Q8N7R1 296 aa7.14□□□□□ -1.27
SCAF11-205ENST00000465950 MLST8Q9BVC4 326 aa7.14□□□□□ -1.27
SCAF11-205ENST00000465950 DENND4CQ5VZ89 1909 aa7.13□□□□□ -1.27
SCAF11-205ENST00000465950 FNDC4Q9H6D8 234 aaPredicted RBP7.13□□□□□ -1.27
SCAF11-205ENST00000465950 IGKV1-17P01599 117 aa7.13□□□□□ -1.27
SCAF11-205ENST00000465950 H2BFSP57053 126 aa7.13□□□□□ -1.27
SCAF11-205ENST00000465950 MLANAQ16655 118 aa7.13□□□□□ -1.27
SCAF11-205ENST00000465950 REG3GQ6UW15 175 aa7.13□□□□□ -1.27
SCAF11-205ENST00000465950 LINC01551Q86U37 167 aa7.13□□□□□ -1.27
SCAF11-205ENST00000465950 BOD1L2Q8IYS8 172 aa7.13□□□□□ -1.27
SCAF11-205ENST00000465950 OCC1Q8TAD7 63 aa7.13□□□□□ -1.27
SCAF11-205ENST00000465950 DMRT1Q9Y5R6 373 aa7.13□□□□□ -1.27
SCAF11-205ENST00000465950 SONP18583 2426 aaKnown RBP7.13□□□□□ -1.27
SCAF11-205ENST00000465950 WISP2O76076 250 aa7.13□□□□□ -1.27
SCAF11-205ENST00000465950 Q8N2B8 174 aa7.13□□□□□ -1.27
SCAF11-205ENST00000465950 Q8N6K4 173 aa7.13□□□□□ -1.27
SCAF11-205ENST00000465950 GFI1Q99684 422 aa7.13□□□□□ -1.27
SCAF11-205ENST00000465950 IGKV2D-26A0A0A0MRZ7 120 aa7.13□□□□□ -1.27
SCAF11-205ENST00000465950 CLUHP3Q96NS8 147 aa7.13□□□□□ -1.27
SCAF11-205ENST00000465950 YLPM1P49750 1951 aaKnown RBP7.12□□□□□ -1.27
SCAF11-205ENST00000465950 LTAP01374 205 aa7.12□□□□□ -1.27
SCAF11-205ENST00000465950 PFN2P35080 140 aa7.12□□□□□ -1.27
SCAF11-205ENST00000465950 C1orf147Q96MC9 270 aaPredicted RBP7.12□□□□□ -1.27
SCAF11-205ENST00000465950 ERG28Q9UKR5 140 aa7.12□□□□□ -1.27
SCAF11-205ENST00000465950 NCKAP5O14513 1909 aa7.12□□□□□ -1.27
SCAF11-205ENST00000465950 PIK3CD-AS1Q5SR53 167 aa7.12□□□□□ -1.27
SCAF11-205ENST00000465950 FAM104BQ5XKR9 115 aa7.12□□□□□ -1.27
SCAF11-205ENST00000465950 SCRT2Q9NQ03 307 aa7.12□□□□□ -1.27
SCAF11-205ENST00000465950 FREM1Q5H8C1 2179 aa7.12□□□□□ -1.27
SCAF11-205ENST00000465950 RS1O15537 224 aa7.12□□□□□ -1.27
SCAF11-205ENST00000465950 CLPSL2Q6UWE3 100 aa7.12□□□□□ -1.27
SCAF11-205ENST00000465950 DYNAPQ8N1N2 210 aa7.12□□□□□ -1.27
SCAF11-205ENST00000465950 CITED1Q99966 193 aa7.12□□□□□ -1.27
SCAF11-205ENST00000465950 FUSP35637 526 aaKnown RBP eCLIP7.12□□□□□ -1.27
SCAF11-205ENST00000465950 GAGE2EQ4V326 116 aa7.12□□□□□ -1.27
SCAF11-205ENST00000465950 OR10D4PQ8NGN7 298 aa7.12□□□□□ -1.27
SCAF11-205ENST00000465950 GAGE2DQ9UEU5 116 aa7.12□□□□□ -1.27
SCAF11-205ENST00000465950 TIMM17AQ99595 171 aa7.11□□□□□ -1.27
SCAF11-205ENST00000465950 ESM1Q9NQ30 184 aa7.11□□□□□ -1.27
SCAF11-205ENST00000465950 UQCR10Q9UDW1 63 aa7.11□□□□□ -1.27
SCAF11-205ENST00000465950 PRB2P02812 416 aaPredicted RBP7.11□□□□□ -1.27
SCAF11-205ENST00000465950 FGF6P10767 208 aa7.11□□□□□ -1.27
SCAF11-205ENST00000465950 ARFGEF3Q5TH69 2177 aa7.11□□□□□ -1.27
SCAF11-205ENST00000465950 NANOS2P60321 138 aaKnown RBP7.11□□□□□ -1.27
SCAF11-205ENST00000465950 Q8N1Y9 231 aa7.11□□□□□ -1.27
SCAF11-205ENST00000465950 GAGE12HA6NDE8 117 aa7.11□□□□□ -1.27
SCAF11-205ENST00000465950 CCDC140Q96MF4 163 aa7.11□□□□□ -1.27
SCAF11-205ENST00000465950 REG3AQ06141 175 aa7.1□□□□□ -1.27
SCAF11-205ENST00000465950 LINC00205P59089 165 aa7.1□□□□□ -1.27
SCAF11-205ENST00000465950 C9orf153Q5TBE3 101 aa7.1□□□□□ -1.27
SCAF11-205ENST00000465950 LINC01545Q5VT33 79 aa7.1□□□□□ -1.27
SCAF11-205ENST00000465950 LGALS9CQ6DKI2 356 aa7.1□□□□□ -1.27
SCAF11-205ENST00000465950 RPL28P46779 137 aaKnown RBP7.1□□□□□ -1.27
SCAF11-205ENST00000465950 SYCNQ0VAF6 134 aa7.1□□□□□ -1.27
SCAF11-205ENST00000465950 FXYD5Q96DB9 178 aa7.1□□□□□ -1.27
SCAF11-205ENST00000465950 DSCR8Q96T75 97 aa7.1□□□□□ -1.27
SCAF11-205ENST00000465950 IGHV4-4A0A075B6R2 117 aa7.09□□□□□ -1.27
SCAF11-205ENST00000465950 TRBV6-1A0A0K0K1D8 114 aa7.09□□□□□ -1.27
SCAF11-205ENST00000465950 NIT1Q86X76 327 aa7.09□□□□□ -1.27
SCAF11-205ENST00000465950 ABCA2Q9BZC7 2435 aa7.09□□□□□ -1.27
SCAF11-205ENST00000465950 A0A0U1RRA0 63 aa7.09□□□□□ -1.27
SCAF11-205ENST00000465950 C5orf30Q96GV9 206 aa7.09□□□□□ -1.27
SCAF11-205ENST00000465950 LRCOL1A6NCL2 159 aa7.09□□□□□ -1.27
SCAF11-205ENST00000465950 CDSNQ15517 529 aa7.09□□□□□ -1.27
SCAF11-205ENST00000465950 IGKV2-24A0A0C4DH68 120 aa7.09□□□□□ -1.27
SCAF11-205ENST00000465950 UBE2D3P61077 147 aa7.09□□□□□ -1.27
SCAF11-205ENST00000465950 MAJINQ3KP22 176 aa7.09□□□□□ -1.27
SCAF11-205ENST00000465950 Q6ZRM9 215 aa7.09□□□□□ -1.27
SCAF11-205ENST00000465950 PRRC2AP48634 2157 aaKnown RBP7.08□□□□□ -1.28
SCAF11-205ENST00000465950 BVES-AS1Q5T3Y7 98 aa7.08□□□□□ -1.28
SCAF11-205ENST00000465950 UNQ9165/PRO28630Q6UXU0 137 aa7.08□□□□□ -1.28
SCAF11-205ENST00000465950 GNRH2O43555 120 aa7.08□□□□□ -1.28
SCAF11-205ENST00000465950 TMEM170AQ8WVE7 144 aa7.08□□□□□ -1.28
SCAF11-205ENST00000465950 SS18L2Q9UHA2 77 aa7.08□□□□□ -1.28
SCAF11-205ENST00000465950 G3V4G9 280 aa7.08□□□□□ -1.28
SCAF11-205ENST00000465950 CYTL1Q9NRR1 136 aa7.08□□□□□ -1.28
SCAF11-205ENST00000465950 PRSS47A8MTI9 375 aa7.07□□□□□ -1.28
SCAF11-205ENST00000465950 ZNF664Q8N3J9 261 aa7.07□□□□□ -1.28
SCAF11-205ENST00000465950 NTN5Q8WTR8 489 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-205ENST00000465950 IGLV4-69A0A075B6H9 119 aa7.07□□□□□ -1.28
SCAF11-205ENST00000465950 COX7B2Q8TF08 81 aa7.07□□□□□ -1.28
SCAF11-205ENST00000465950 A0A0G2JRQ6 117 aa7.07□□□□□ -1.28
SCAF11-205ENST00000465950 AVPP01185 164 aa7.07□□□□□ -1.28
SCAF11-205ENST00000465950 NUP35Q8NFH5 326 aa7.07□□□□□ -1.28
SCAF11-205ENST00000465950 CSPG4Q6UVK1 2322 aa7.06□□□□□ -1.28
SCAF11-205ENST00000465950 IGLV10-54A0A075B6I4 117 aa7.06□□□□□ -1.28
SCAF11-205ENST00000465950 C6orf223Q8N319 242 aa7.06□□□□□ -1.28
SCAF11-205ENST00000465950 SPATA45Q537H7 98 aa7.06□□□□□ -1.28
SCAF11-205ENST00000465950 C22orf34Q6ZV56 151 aa7.06□□□□□ -1.28
SCAF11-205ENST00000465950 TRBV12-3P01733 135 aa7.06□□□□□ -1.28
SCAF11-205ENST00000465950 IFITM1P13164 125 aa7.06□□□□□ -1.28
SCAF11-205ENST00000465950 EDN2P20800 178 aa7.06□□□□□ -1.28
SCAF11-205ENST00000465950 C5orf38Q86SI9 138 aa7.06□□□□□ -1.28
SCAF11-205ENST00000465950 Q9H8V8 135 aa7.06□□□□□ -1.28
SCAF11-205ENST00000465950 MED12Q93074 2177 aa7.06□□□□□ -1.28
SCAF11-205ENST00000465950 MUC22E2RYF6 1773 aaPredicted RBP7.05□□□□□ -1.28
SCAF11-205ENST00000465950 Q6ZVH6 145 aa7.05□□□□□ -1.28
SCAF11-205ENST00000465950 IGF2RP11717 2491 aa7.05□□□□□ -1.28
SCAF11-205ENST00000465950 CRYGBP07316 175 aa7.05□□□□□ -1.28
SCAF11-205ENST00000465950 C16orf90A8MZG2 172 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms