RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 HHLA3Q9XRX5 114 aa2.23□□□□□ -2.05
CD55-207ENST00000465534 WDR83OSQ9Y284 106 aa2.23□□□□□ -2.05
CD55-207ENST00000465534 V9GY05 133 aa2.23□□□□□ -2.05
CD55-207ENST00000465534 HLA-DRB4X5D2U9 266 aa2.23□□□□□ -2.05
CD55-207ENST00000465534 ALPK2Q86TB3 2170 aa2.23□□□□□ -2.05
CD55-207ENST00000465534 TRAV2A0A0B4J234 112 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 TRAV17A0A0B4J275 112 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 IGHV1-24A0A0C4DH33 117 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 LYRM9A8MSI8 78 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 SCGB1C2P0DMR2 95 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 IGHV4-38-2P0DP08 117 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 PEBP1P30086 187 aaKnown RBP2.22□□□□□ -2.05
CD55-207ENST00000465534 CXCL5P42830 114 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 SMIM11AP58511 58 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 HIST1H4AP62805 103 aaKnown RBP2.22□□□□□ -2.05
CD55-207ENST00000465534 MRPS36P82909 103 aaKnown RBP2.22□□□□□ -2.05
CD55-207ENST00000465534 ERCC8Q13216 396 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 ZNF726P1Q15940 193 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 DEFB133Q30KQ1 61 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 FAM219BQ5XKK7 198 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 PVRIGQ6DKI7 326 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 C5orf38Q86SI9 138 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 OR5AS1Q8N127 324 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 FAM19A2Q8N3H0 131 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 RFESDQ8TAC1 157 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 BRK1Q8WUW1 75 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 CHCHD1Q96BP2 118 aaKnown RBP2.22□□□□□ -2.05
CD55-207ENST00000465534 C11orf1Q9H5F2 150 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 GNG13Q9P2W3 67 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 F11RQ9Y624 299 aaKnown RBP2.22□□□□□ -2.05
CD55-207ENST00000465534 MALRD1Q5VYJ5 2156 aa2.22□□□□□ -2.05
CD55-207ENST00000465534 hADV29S1A0JD25 119 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 PLAC8L1A1L4L8 177 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 CEBPZOSA8MTT3 80 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 C8orf87E5RJ46 101 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 LINC01619G3V211 115 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 SMKR1H3BMG3 65 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 CCL24O00175 119 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 ATOX1O00244 68 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 SS18L1O75177 396 aaPredicted RBP2.21□□□□□ -2.06
CD55-207ENST00000465534 CST7O76096 145 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 SLC25A14O95258 325 aaPredicted RBP2.21□□□□□ -2.06
CD55-207ENST00000465534 LYPD3O95274 346 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 HLA-DQA1P01909 254 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 TCRAP04437 139 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 S100A3P33764 101 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 SSR2P43308 183 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 FXYD2P54710 66 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 SUPT4H1P63272 117 aaKnown RBP2.21□□□□□ -2.06
CD55-207ENST00000465534 HBG1P69891 147 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 HBG2P69892 147 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 CCL8P80075 99 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 SRSF9Q13242 221 aaKnown RBP eCLIP2.21□□□□□ -2.06
CD55-207ENST00000465534 SPANXN4Q5MJ08 99 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 LELP1Q5T871 98 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 FRG2Q64ET8 278 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 LCN10Q6JVE6 187 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 FP248Q71RG6 208 aaPredicted RBP2.21□□□□□ -2.06
CD55-207ENST00000465534 RPS27LQ71UM5 84 aaKnown RBP2.21□□□□□ -2.06
CD55-207ENST00000465534 LINC00305Q7Z4B0 112 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 SLC22A24Q8N4F4 322 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 THAP8Q8NA92 274 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 LY6G5BQ8NDX9 201 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 NT5CQ8TCD5 201 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 COPS9Q8WXC6 57 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 TMEM230Q96A57 120 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 CHAC1Q9BUX1 264 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 DEFB127Q9H1M4 99 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 LINC00597Q9H2U6 94 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 DEPPQ9NTK1 212 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 CKLFQ9UBR5 152 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 LY96Q9Y6Y9 160 aa2.21□□□□□ -2.06
CD55-207ENST00000465534 TRAV8-2A0A0B4J237 113 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 IGHV1-58A0A0C4DH39 117 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 A0A1B0GXF2 115 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 TCRBV4S1A1TA0A5B7 111 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 SNURFLB1AK76 121 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 LGALS9O00182 355 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 UPK2O00526 184 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 FFAR1O14842 300 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 SYNGR2O43760 224 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 CDK2AP2O75956 126 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 IGKV3-15P01624 115 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 ACYP1P07311 99 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 CA6P23280 308 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 SAA4P35542 130 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 ZNF136P52737 540 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 EFNA4P52798 201 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 UBE2D3P61077 147 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 NPC2P61916 151 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 UBE2D2P62837 147 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 ZNF542PQ5EBM4 170 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 C1orf140Q5VVS0 124 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 UNQ9165/PRO28630Q6UXU0 137 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 SDIM1Q6ZPB5 146 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 NINQ8N4C6 2090 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 C10orf105Q8TEF2 133 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 NMNAT3Q96T66 252 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 PRSS27Q9BQR3 290 aa2.2□□□□□ -2.06
CD55-207ENST00000465534 HDHD3Q9BSH5 251 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms