RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 H3BNG1 76 aa12.92□□□□□ -0.34
SCAMP3-204ENST00000465312 GATA1P15976 413 aaPredicted RBP12.92□□□□□ -0.34
SCAMP3-204ENST00000465312 RHOHQ15669 191 aa12.92□□□□□ -0.34
SCAMP3-204ENST00000465312 CT83Q5H943 113 aa12.92□□□□□ -0.34
SCAMP3-204ENST00000465312 LGALS9CQ6DKI2 356 aa12.92□□□□□ -0.34
SCAMP3-204ENST00000465312 ZFP2Q6ZN57 461 aa12.92□□□□□ -0.34
SCAMP3-204ENST00000465312 PGLYRP4Q96LB8 373 aa12.92□□□□□ -0.34
SCAMP3-204ENST00000465312 F5H697 171 aa12.91□□□□□ -0.34
SCAMP3-204ENST00000465312 NXPH4O95158 308 aa12.91□□□□□ -0.34
SCAMP3-204ENST00000465312 MGPP08493 103 aa12.91□□□□□ -0.34
SCAMP3-204ENST00000465312 SRIP30626 198 aa12.91□□□□□ -0.34
SCAMP3-204ENST00000465312 TWIST1Q15672 202 aa12.91□□□□□ -0.34
SCAMP3-204ENST00000465312 C14orf178Q8N769 122 aaPredicted RBP12.91□□□□□ -0.34
SCAMP3-204ENST00000465312 SLC25A29Q8N8R3 303 aa12.91□□□□□ -0.34
SCAMP3-204ENST00000465312 TRGC1P0CF51 173 aa12.9□□□□□ -0.34
SCAMP3-204ENST00000465312 CTRLP40313 264 aa12.9□□□□□ -0.34
SCAMP3-204ENST00000465312 CCL18P55774 89 aa12.9□□□□□ -0.34
SCAMP3-204ENST00000465312 MRPL23Q16540 153 aaKnown RBP12.9□□□□□ -0.34
SCAMP3-204ENST00000465312 TSKUQ8WUA8 353 aa12.9□□□□□ -0.34
SCAMP3-204ENST00000465312 LOC100131303A0A0U1RQF7 123 aa12.89□□□□□ -0.35
SCAMP3-204ENST00000465312 TRBV6-4A0A1B0GX49 114 aa12.89□□□□□ -0.35
SCAMP3-204ENST00000465312 LINC00862A6NCI5 91 aa12.89□□□□□ -0.35
SCAMP3-204ENST00000465312 K7EQD1 137 aa12.89□□□□□ -0.35
SCAMP3-204ENST00000465312 NTF3P20783 257 aa12.89□□□□□ -0.35
SCAMP3-204ENST00000465312 PNRC1Q12796 327 aaPredicted RBP12.89□□□□□ -0.35
SCAMP3-204ENST00000465312 SMIM15Q7Z3B0 74 aa12.89□□□□□ -0.35
SCAMP3-204ENST00000465312 GTSF1Q8WW33 167 aa12.89□□□□□ -0.35
SCAMP3-204ENST00000465312 MSRB1Q9NZV6 116 aa12.89□□□□□ -0.35
SCAMP3-204ENST00000465312 V9GYV3 84 aa12.89□□□□□ -0.35
SCAMP3-204ENST00000465312 TMEM218A2RU14 115 aa12.88□□□□□ -0.35
SCAMP3-204ENST00000465312 HIGD1CA8MV81 97 aa12.88□□□□□ -0.35
SCAMP3-204ENST00000465312 CRYGDP07320 174 aa12.88□□□□□ -0.35
SCAMP3-204ENST00000465312 ALMS1Q8TCU4 4167 aa12.88□□□□□ -0.35
SCAMP3-204ENST00000465312 Q6ZSN1 163 aa12.87□□□□□ -0.35
SCAMP3-204ENST00000465312 NEGR1Q7Z3B1 354 aa12.87□□□□□ -0.35
SCAMP3-204ENST00000465312 GFRA4Q9GZZ7 299 aa12.87□□□□□ -0.35
SCAMP3-204ENST00000465312 GAGE12JA6NER3 117 aa12.86□□□□□ -0.35
SCAMP3-204ENST00000465312 GAGE1Q13065 139 aa12.86□□□□□ -0.35
SCAMP3-204ENST00000465312 GAGE4Q13068 117 aa12.86□□□□□ -0.35
SCAMP3-204ENST00000465312 GAGE5Q13069 117 aa12.86□□□□□ -0.35
SCAMP3-204ENST00000465312 GAGE13Q4V321 117 aa12.86□□□□□ -0.35
SCAMP3-204ENST00000465312 PPP1R2P9O14990 202 aa12.85□□□□□ -0.35
SCAMP3-204ENST00000465312 UFSP1Q6NVU6 142 aa12.85□□□□□ -0.35
SCAMP3-204ENST00000465312 WDR73Q6P4I2 378 aa12.85□□□□□ -0.35
SCAMP3-204ENST00000465312 NAT8BQ9UHF3 227 aa12.85□□□□□ -0.35
SCAMP3-204ENST00000465312 FAM231BA6NCW3 169 aa12.84□□□□□ -0.35
SCAMP3-204ENST00000465312 MT-ND4LP03901 98 aa12.84□□□□□ -0.35
SCAMP3-204ENST00000465312 EVI2AP22794 236 aa12.84□□□□□ -0.35
SCAMP3-204ENST00000465312 RAB4BP61018 213 aa12.84□□□□□ -0.35
SCAMP3-204ENST00000465312 RNF212Q495C1 297 aa12.84□□□□□ -0.35
SCAMP3-204ENST00000465312 DPH3P1Q9H4G8 78 aa12.84□□□□□ -0.35
SCAMP3-204ENST00000465312 A0A1B0GUT8 65 aa12.83□□□□□ -0.36
SCAMP3-204ENST00000465312 ADCYAP1P18509 176 aa12.83□□□□□ -0.36
SCAMP3-204ENST00000465312 ESRGQ1W209 222 aa12.83□□□□□ -0.36
SCAMP3-204ENST00000465312 SH2D6Q7Z4S9 175 aa12.83□□□□□ -0.36
SCAMP3-204ENST00000465312 SEC11CQ9BY50 192 aa12.83□□□□□ -0.36
SCAMP3-204ENST00000465312 LINC00588Q9Y4M8 146 aa12.83□□□□□ -0.36
SCAMP3-204ENST00000465312 LYSTQ99698 3801 aa12.82□□□□□ -0.36
SCAMP3-204ENST00000465312 RIGQ13278 110 aa12.82□□□□□ -0.36
SCAMP3-204ENST00000465312 NUP35Q8NFH5 326 aa12.82□□□□□ -0.36
SCAMP3-204ENST00000465312 CNFNQ9BYD5 112 aa12.82□□□□□ -0.36
SCAMP3-204ENST00000465312 KMT2CQ8NEZ4 4911 aaKnown RBP12.82□□□□□ -0.36
SCAMP3-204ENST00000465312 IGLV2-18A0A075B6J9 118 aa12.81□□□□□ -0.36
SCAMP3-204ENST00000465312 FOXA3P55318 350 aaPredicted RBP12.81□□□□□ -0.36
SCAMP3-204ENST00000465312 RPL36AP83881 106 aaKnown RBP12.81□□□□□ -0.36
SCAMP3-204ENST00000465312 ATP6V0E2Q8NHE4 81 aa12.81□□□□□ -0.36
SCAMP3-204ENST00000465312 ZNRF2Q8NHG8 242 aa12.81□□□□□ -0.36
SCAMP3-204ENST00000465312 RPL36ALQ969Q0 106 aaKnown RBP12.81□□□□□ -0.36
SCAMP3-204ENST00000465312 ANAPC16Q96DE5 110 aa12.81□□□□□ -0.36
SCAMP3-204ENST00000465312 SMIM27A0A1W2PRY6 76 aa12.8□□□□□ -0.36
SCAMP3-204ENST00000465312 H7C1H1 209 aa12.8□□□□□ -0.36
SCAMP3-204ENST00000465312 LYPD5Q6UWN5 251 aa12.8□□□□□ -0.36
SCAMP3-204ENST00000465312 KIF25-AS1Q9Y6Z4 181 aa12.8□□□□□ -0.36
SCAMP3-204ENST00000465312 FAM3BP58499 235 aaPredicted RBP12.79□□□□□ -0.36
SCAMP3-204ENST00000465312 SUMO4Q6EEV6 95 aa12.79□□□□□ -0.36
SCAMP3-204ENST00000465312 MRPS16Q9Y3D3 137 aaKnown RBP12.79□□□□□ -0.36
SCAMP3-204ENST00000465312 TRBV10-1A0A0K0K1A3 114 aa12.78□□□□□ -0.36
SCAMP3-204ENST00000465312 M0R2N4 97 aa12.78□□□□□ -0.36
SCAMP3-204ENST00000465312 NDUFA5Q16718 116 aa12.78□□□□□ -0.36
SCAMP3-204ENST00000465312 MRPL54Q6P161 138 aaKnown RBP12.78□□□□□ -0.36
SCAMP3-204ENST00000465312 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.78□□□□□ -0.36
SCAMP3-204ENST00000465312 Q9UF83 564 aa12.78□□□□□ -0.36
SCAMP3-204ENST00000465312 CAMPP49913 170 aa12.77□□□□□ -0.37
SCAMP3-204ENST00000465312 TNFRSF18Q9Y5U5 241 aa12.77□□□□□ -0.37
SCAMP3-204ENST00000465312 TRBV7-3A0A075B6L6 115 aa12.76□□□□□ -0.37
SCAMP3-204ENST00000465312 OR10J3Q5JRS4 329 aa12.76□□□□□ -0.37
SCAMP3-204ENST00000465312 NEXN-AS1Q8NBZ9 246 aa12.76□□□□□ -0.37
SCAMP3-204ENST00000465312 GTSF1LQ9H1H1 148 aa12.76□□□□□ -0.37
SCAMP3-204ENST00000465312 DNAH1Q9P2D7 4330 aa12.75□□□□□ -0.37
SCAMP3-204ENST00000465312 TRAV26-2A0A0B4J265 109 aa12.75□□□□□ -0.37
SCAMP3-204ENST00000465312 LINC00315P59091 139 aa12.75□□□□□ -0.37
SCAMP3-204ENST00000465312 RASL11AQ6T310 242 aa12.75□□□□□ -0.37
SCAMP3-204ENST00000465312 Q9H8V8 135 aa12.75□□□□□ -0.37
SCAMP3-204ENST00000465312 SACSQ9NZJ4 4579 aa12.75□□□□□ -0.37
SCAMP3-204ENST00000465312 TRAV8-6A0A0B4J262 113 aa12.74□□□□□ -0.37
SCAMP3-204ENST00000465312 IGHV3-38A0A0C4DH36 116 aa12.74□□□□□ -0.37
SCAMP3-204ENST00000465312 APOC3P02656 99 aa12.74□□□□□ -0.37
SCAMP3-204ENST00000465312 S100A8P05109 93 aa12.74□□□□□ -0.37
SCAMP3-204ENST00000465312 TMEM191AQ9H0A3 160 aa12.74□□□□□ -0.37
SCAMP3-204ENST00000465312 A0A1B0GW15 77 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms