RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 LINC00315P59091 139 aa9.46□□□□□ -0.89
CLCNKA-204ENST00000464764 ANKRD29Q8N6D5 301 aa9.46□□□□□ -0.89
CLCNKA-204ENST00000464764 ATP6V0E2Q8NHE4 81 aa9.46□□□□□ -0.89
CLCNKA-204ENST00000464764 BEX4Q9NWD9 120 aaPredicted RBP9.46□□□□□ -0.89
CLCNKA-204ENST00000464764 MUC6Q6W4X9 2439 aa9.46□□□□□ -0.89
CLCNKA-204ENST00000464764 EIF4EBP3O60516 100 aaPredicted RBP9.46□□□□□ -0.9
CLCNKA-204ENST00000464764 EDN2P20800 178 aa9.46□□□□□ -0.9
CLCNKA-204ENST00000464764 PPDPFLQ8WWR9 84 aa9.46□□□□□ -0.9
CLCNKA-204ENST00000464764 LINC00477Q96M19 166 aa9.46□□□□□ -0.9
CLCNKA-204ENST00000464764 C1orf122Q6ZSJ8 110 aa9.45□□□□□ -0.9
CLCNKA-204ENST00000464764 C11orf71Q6IPW1 123 aa9.45□□□□□ -0.9
CLCNKA-204ENST00000464764 C9orf139Q6ZV77 190 aa9.45□□□□□ -0.9
CLCNKA-204ENST00000464764 ZNF256Q9Y2P7 627 aaPredicted RBP9.45□□□□□ -0.9
CLCNKA-204ENST00000464764 FAM74A4Q5TZK3 123 aa9.45□□□□□ -0.9
CLCNKA-204ENST00000464764 KIF25-AS1Q9Y6Z4 181 aa9.45□□□□□ -0.9
CLCNKA-204ENST00000464764 A8MWV9 139 aa9.44□□□□□ -0.9
CLCNKA-204ENST00000464764 PMVKQ15126 192 aa9.44□□□□□ -0.9
CLCNKA-204ENST00000464764 SUMO4Q6EEV6 95 aa9.44□□□□□ -0.9
CLCNKA-204ENST00000464764 ZNF580Q9UK33 172 aa9.44□□□□□ -0.9
CLCNKA-204ENST00000464764 ELANEP08246 267 aa9.44□□□□□ -0.9
CLCNKA-204ENST00000464764 C10orf126Q8N4M7 172 aa9.44□□□□□ -0.9
CLCNKA-204ENST00000464764 C5orf56Q8N8D9 126 aa9.44□□□□□ -0.9
CLCNKA-204ENST00000464764 SLC25A29Q8N8R3 303 aa9.44□□□□□ -0.9
CLCNKA-204ENST00000464764 AMELXQ99217 191 aa9.44□□□□□ -0.9
CLCNKA-204ENST00000464764 CELSR2Q9HCU4 2923 aa9.43□□□□□ -0.9
CLCNKA-204ENST00000464764 CSMD2Q7Z408 3487 aa9.43□□□□□ -0.9
CLCNKA-204ENST00000464764 A4D1N5 150 aa9.43□□□□□ -0.9
CLCNKA-204ENST00000464764 SOCS3O14543 225 aa9.43□□□□□ -0.9
CLCNKA-204ENST00000464764 UBE2E1P51965 193 aa9.43□□□□□ -0.9
CLCNKA-204ENST00000464764 TRBV20-1A0A075B6N2 111 aa9.43□□□□□ -0.9
CLCNKA-204ENST00000464764 TRAV41A0A0B4J266 112 aa9.43□□□□□ -0.9
CLCNKA-204ENST00000464764 POLR2KP53803 58 aaKnown RBP9.43□□□□□ -0.9
CLCNKA-204ENST00000464764 PRO1854Q9UHT4 67 aa9.43□□□□□ -0.9
CLCNKA-204ENST00000464764 SDHAF1A6NFY7 115 aa9.42□□□□□ -0.9
CLCNKA-204ENST00000464764 C9JAW5 83 aa9.42□□□□□ -0.9
CLCNKA-204ENST00000464764 ZNF688P0C7X2 276 aa9.42□□□□□ -0.9
CLCNKA-204ENST00000464764 HERVK_113P61574 105 aa9.42□□□□□ -0.9
CLCNKA-204ENST00000464764 LENEPQ9Y5L5 61 aa9.42□□□□□ -0.9
CLCNKA-204ENST00000464764 NACAE9PAV3 2078 aa9.42□□□□□ -0.9
CLCNKA-204ENST00000464764 TRAV2A0A0B4J234 112 aa9.42□□□□□ -0.9
CLCNKA-204ENST00000464764 J3QQQ9 107 aa9.42□□□□□ -0.9
CLCNKA-204ENST00000464764 ANAPC13Q9BS18 74 aa9.42□□□□□ -0.9
CLCNKA-204ENST00000464764 BRD3OSQ6XYD6 125 aa9.42□□□□□ -0.9
CLCNKA-204ENST00000464764 UBTD1Q9HAC8 227 aa9.42□□□□□ -0.9
CLCNKA-204ENST00000464764 TRAV12-3A0A0B4J271 114 aa9.41□□□□□ -0.9
CLCNKA-204ENST00000464764 ADARB2-AS1A8MUL3 147 aa9.41□□□□□ -0.9
CLCNKA-204ENST00000464764 B5MCH6 92 aa9.41□□□□□ -0.9
CLCNKA-204ENST00000464764 OVOL1O14753 267 aa9.41□□□□□ -0.9
CLCNKA-204ENST00000464764 IGKV3-20P01619 116 aa9.41□□□□□ -0.9
CLCNKA-204ENST00000464764 KLK9Q2XQG4 91 aa9.41□□□□□ -0.9
CLCNKA-204ENST00000464764 KLK9Q9UKQ9 250 aa9.41□□□□□ -0.9
CLCNKA-204ENST00000464764 ADORA2A-AS1P86434 159 aa9.41□□□□□ -0.9
CLCNKA-204ENST00000464764 Q1RN00 199 aa9.41□□□□□ -0.9
CLCNKA-204ENST00000464764 SLC25A20O43772 301 aa9.4□□□□□ -0.9
CLCNKA-204ENST00000464764 SBSPONQ8IVN8 264 aa9.4□□□□□ -0.9
CLCNKA-204ENST00000464764 FAM19A4Q96LR4 140 aa9.4□□□□□ -0.9
CLCNKA-204ENST00000464764 NPFFO15130 113 aa9.4□□□□□ -0.9
CLCNKA-204ENST00000464764 LGALS3P17931 250 aaKnown RBP9.4□□□□□ -0.9
CLCNKA-204ENST00000464764 LY6EQ16553 131 aa9.4□□□□□ -0.9
CLCNKA-204ENST00000464764 ZNF876PQ49A33 203 aa9.4□□□□□ -0.9
CLCNKA-204ENST00000464764 NCOR2Q9Y618 2525 aa9.4□□□□□ -0.91
CLCNKA-204ENST00000464764 VCYO14598 125 aa9.4□□□□□ -0.91
CLCNKA-204ENST00000464764 IGHV4-39P01824 125 aa9.4□□□□□ -0.91
CLCNKA-204ENST00000464764 MUSTN1Q8IVN3 82 aa9.4□□□□□ -0.91
CLCNKA-204ENST00000464764 BPESC1Q9GZL8 116 aa9.4□□□□□ -0.91
CLCNKA-204ENST00000464764 HIVEP3Q5T1R4 2406 aa9.39□□□□□ -0.91
CLCNKA-204ENST00000464764 TRAV12-2A0A075B6T6 113 aa9.39□□□□□ -0.91
CLCNKA-204ENST00000464764 CRLF1O75462 422 aa9.39□□□□□ -0.91
CLCNKA-204ENST00000464764 RHPN1-AS1Q9BWJ2 59 aa9.39□□□□□ -0.91
CLCNKA-204ENST00000464764 ERG28Q9UKR5 140 aa9.39□□□□□ -0.91
CLCNKA-204ENST00000464764 IGHV4OR15-8A0A075B7B6 117 aa9.39□□□□□ -0.91
CLCNKA-204ENST00000464764 A0A087WW49 117 aa9.39□□□□□ -0.91
CLCNKA-204ENST00000464764 FAM159AQ6UWV7 190 aa9.39□□□□□ -0.91
CLCNKA-204ENST00000464764 MDFICQ9P1T7 246 aa9.39□□□□□ -0.91
CLCNKA-204ENST00000464764 IGHV1-69DA0A0B4J2H0 117 aa9.38□□□□□ -0.91
CLCNKA-204ENST00000464764 IGHV3-33P01772 117 aa9.38□□□□□ -0.91
CLCNKA-204ENST00000464764 FBXL19-AS1Q494R0 122 aa9.38□□□□□ -0.91
CLCNKA-204ENST00000464764 LYRM7Q5U5X0 104 aa9.38□□□□□ -0.91
CLCNKA-204ENST00000464764 NPC2P61916 151 aa9.38□□□□□ -0.91
CLCNKA-204ENST00000464764 PPP1R17O96001 155 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 POM121L12Q8N7R1 296 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 NTN5Q8WTR8 489 aaPredicted RBP9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 A0A0J9YXV3 536 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 P0DMU3 169 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 FAM231AP0DMU4 169 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 FAM231CP0DMU5 169 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 LMO4P61968 165 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 PAPPA-AS1Q5QFB9 102 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 TMEM263Q8WUH6 116 aaKnown RBP9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 TRAV4A0A0B4J268 109 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 PF4V1P10720 104 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 TCF15Q12870 199 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 FOXC1Q12948 553 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 ZFAND6Q6FIF0 208 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 TEX29Q8N6K0 151 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 TMEM141Q96I45 108 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 TIMM17AQ99595 171 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 ABCA2Q9BZC7 2435 aa9.37□□□□□ -0.91
CLCNKA-204ENST00000464764 TEX49A0A1B0GTD5 131 aa9.36□□□□□ -0.91
CLCNKA-204ENST00000464764 NDUFA4O00483 81 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms