RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 GAGE5Q13069 117 aa11.02□□□□□ -0.65
COL1A1-202ENST00000463440 GAGE13Q4V321 117 aa11.02□□□□□ -0.65
COL1A1-202ENST00000463440 CENPWQ5EE01 88 aa11.02□□□□□ -0.65
COL1A1-202ENST00000463440 LELP1Q5T871 98 aa11.02□□□□□ -0.65
COL1A1-202ENST00000463440 Q6ZRN7 208 aaPredicted RBP11.02□□□□□ -0.65
COL1A1-202ENST00000463440 MSRB1Q9NZV6 116 aa11.02□□□□□ -0.65
COL1A1-202ENST00000463440 A0A087WWL8 130 aa11.01□□□□□ -0.65
COL1A1-202ENST00000463440 GNG4P50150 75 aa11.01□□□□□ -0.65
COL1A1-202ENST00000463440 C14orf178Q8N769 122 aaPredicted RBP11.01□□□□□ -0.65
COL1A1-202ENST00000463440 DAZAP1Q96EP5 407 aaKnown RBP11.01□□□□□ -0.65
COL1A1-202ENST00000463440 SMIM12Q96EX1 92 aa11.01□□□□□ -0.65
COL1A1-202ENST00000463440 MED9Q9NWA0 146 aa11.01□□□□□ -0.65
COL1A1-202ENST00000463440 VAX2Q9UIW0 290 aa11.01□□□□□ -0.65
COL1A1-202ENST00000463440 TNFRSF18Q9Y5U5 241 aa11.01□□□□□ -0.65
COL1A1-202ENST00000463440 OR5AL1P0C617 328 aa11□□□□□ -0.65
COL1A1-202ENST00000463440 LINC01556Q5JQF7 62 aa11□□□□□ -0.65
COL1A1-202ENST00000463440 SPATA12Q7Z6I5 190 aa11□□□□□ -0.65
COL1A1-202ENST00000463440 DNAH11Q96DT5 4516 aa10.99□□□□□ -0.65
COL1A1-202ENST00000463440 RAB19A4D1S5 217 aa10.99□□□□□ -0.65
COL1A1-202ENST00000463440 SNAI2O43623 268 aa10.99□□□□□ -0.65
COL1A1-202ENST00000463440 LINC00694P0DN24 101 aa10.99□□□□□ -0.65
COL1A1-202ENST00000463440 BLOC1S1P78537 153 aa10.99□□□□□ -0.65
COL1A1-202ENST00000463440 SPANXN1Q5VSR9 72 aa10.99□□□□□ -0.65
COL1A1-202ENST00000463440 OR10AG1Q8NH19 301 aa10.99□□□□□ -0.65
COL1A1-202ENST00000463440 SSBP4Q9BWG4 385 aaPredicted RBP10.99□□□□□ -0.65
COL1A1-202ENST00000463440 A0A087WWC5 75 aa10.98□□□□□ -0.65
COL1A1-202ENST00000463440 EREGO14944 169 aa10.98□□□□□ -0.65
COL1A1-202ENST00000463440 IGLV2-8P01709 118 aa10.98□□□□□ -0.65
COL1A1-202ENST00000463440 ERVFC1-1P60608 527 aa10.98□□□□□ -0.65
COL1A1-202ENST00000463440 ALKAL2Q6UX46 152 aa10.98□□□□□ -0.65
COL1A1-202ENST00000463440 BIN3Q9NQY0 253 aa10.98□□□□□ -0.65
COL1A1-202ENST00000463440 HERC2O95714 4834 aa10.98□□□□□ -0.65
COL1A1-202ENST00000463440 DYNC1H1Q14204 4646 aaKnown RBP10.98□□□□□ -0.65
COL1A1-202ENST00000463440 TRBV10-1A0A0K0K1A3 114 aa10.97□□□□□ -0.65
COL1A1-202ENST00000463440 RPS20P60866 119 aaKnown RBP10.97□□□□□ -0.65
COL1A1-202ENST00000463440 Q9UF83 564 aa10.97□□□□□ -0.65
COL1A1-202ENST00000463440 KIAA1109Q2LD37 5005 aa10.97□□□□□ -0.65
COL1A1-202ENST00000463440 IGHV3-30P01768 117 aa10.96□□□□□ -0.65
COL1A1-202ENST00000463440 IGHV3-33P01772 117 aa10.96□□□□□ -0.65
COL1A1-202ENST00000463440 IGHV3-30-3P0DP02 117 aa10.96□□□□□ -0.65
COL1A1-202ENST00000463440 IGHV3-30-5P0DP03 117 aa10.96□□□□□ -0.65
COL1A1-202ENST00000463440 RAB4BP61018 213 aa10.96□□□□□ -0.65
COL1A1-202ENST00000463440 RPL36AP83881 106 aaKnown RBP10.96□□□□□ -0.65
COL1A1-202ENST00000463440 OR2D3Q8NGH3 330 aa10.96□□□□□ -0.65
COL1A1-202ENST00000463440 RPL36ALQ969Q0 106 aaKnown RBP10.96□□□□□ -0.65
COL1A1-202ENST00000463440 TRBV20OR9-2A0A075B6H5 130 aa10.95□□□□□ -0.66
COL1A1-202ENST00000463440 MUC21A0A0G2JKD1 596 aa10.95□□□□□ -0.66
COL1A1-202ENST00000463440 MUC21A0A140T8X8 626 aa10.95□□□□□ -0.66
COL1A1-202ENST00000463440 XKRY2A2RUG3 117 aa10.95□□□□□ -0.66
COL1A1-202ENST00000463440 C19orf71A6NCJ1 209 aa10.95□□□□□ -0.66
COL1A1-202ENST00000463440 IBA57-AS1B1ANH7 110 aa10.95□□□□□ -0.66
COL1A1-202ENST00000463440 P01737 135 aa10.95□□□□□ -0.66
COL1A1-202ENST00000463440 ZNF56Q15929 161 aa10.95□□□□□ -0.66
COL1A1-202ENST00000463440 A0A1B0GVG6 124 aa10.94□□□□□ -0.66
COL1A1-202ENST00000463440 SMIM17P0DL12 118 aa10.94□□□□□ -0.66
COL1A1-202ENST00000463440 NKX2-5P52952 324 aaPredicted RBP10.94□□□□□ -0.66
COL1A1-202ENST00000463440 KRTAP10-2P60368 255 aa10.94□□□□□ -0.66
COL1A1-202ENST00000463440 SSTP61278 116 aa10.94□□□□□ -0.66
COL1A1-202ENST00000463440 FER1L6-AS1Q8NA97 138 aa10.94□□□□□ -0.66
COL1A1-202ENST00000463440 TPPP3Q9BW30 176 aa10.94□□□□□ -0.66
COL1A1-202ENST00000463440 TRBV7-3A0A075B6L6 115 aa10.93□□□□□ -0.66
COL1A1-202ENST00000463440 PSCAO43653 123 aa10.93□□□□□ -0.66
COL1A1-202ENST00000463440 GZMBP10144 247 aa10.93□□□□□ -0.66
COL1A1-202ENST00000463440 AP1S3Q96PC3 154 aa10.93□□□□□ -0.66
COL1A1-202ENST00000463440 PGPEP1Q9NXJ5 209 aa10.93□□□□□ -0.66
COL1A1-202ENST00000463440 RBFOX3A6NFN3 312 aa10.92□□□□□ -0.66
COL1A1-202ENST00000463440 F5H697 171 aa10.92□□□□□ -0.66
COL1A1-202ENST00000463440 IGLC6P0CF74 106 aa10.92□□□□□ -0.66
COL1A1-202ENST00000463440 UBE2D3P61077 147 aa10.92□□□□□ -0.66
COL1A1-202ENST00000463440 UBE2D2P62837 147 aa10.92□□□□□ -0.66
COL1A1-202ENST00000463440 LAGE3Q14657 143 aa10.92□□□□□ -0.66
COL1A1-202ENST00000463440 LYPD6BQ8NI32 183 aa10.92□□□□□ -0.66
COL1A1-202ENST00000463440 A0A087WTM6 91 aa10.91□□□□□ -0.66
COL1A1-202ENST00000463440 F2Z2F3 143 aa10.91□□□□□ -0.66
COL1A1-202ENST00000463440 TMEM250H0YL14 139 aa10.91□□□□□ -0.66
COL1A1-202ENST00000463440 CACNG7P62955 275 aa10.91□□□□□ -0.66
COL1A1-202ENST00000463440 OR10G8Q8NGN5 311 aa10.91□□□□□ -0.66
COL1A1-202ENST00000463440 Q9HAA7 133 aa10.91□□□□□ -0.66
COL1A1-202ENST00000463440 URGCP-MRPS24S4R325 110 aa10.91□□□□□ -0.66
COL1A1-202ENST00000463440 CDK2AP2O75956 126 aa10.9□□□□□ -0.66
COL1A1-202ENST00000463440 TOR2AQ5JU69 321 aa10.9□□□□□ -0.66
COL1A1-202ENST00000463440 CDPF1Q6NVV7 123 aa10.9□□□□□ -0.66
COL1A1-202ENST00000463440 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.9□□□□□ -0.66
COL1A1-202ENST00000463440 NEXN-AS1Q8NBZ9 246 aa10.9□□□□□ -0.66
COL1A1-202ENST00000463440 NUDT10Q8NFP7 164 aa10.9□□□□□ -0.66
COL1A1-202ENST00000463440 NUDT11Q96G61 164 aa10.9□□□□□ -0.66
COL1A1-202ENST00000463440 OCC1Q8TAD7 63 aa10.89□□□□□ -0.67
COL1A1-202ENST00000463440 KIF25-AS1Q9Y6Z4 181 aa10.89□□□□□ -0.67
COL1A1-202ENST00000463440 TRAV8-3A0A0A6YYJ7 113 aa10.88□□□□□ -0.67
COL1A1-202ENST00000463440 KCNIP4Q6PIL6 250 aa10.88□□□□□ -0.67
COL1A1-202ENST00000463440 LYZL1Q6UWQ5 148 aa10.88□□□□□ -0.67
COL1A1-202ENST00000463440 DAZ4Q86SG3 579 aaKnown RBP10.88□□□□□ -0.67
COL1A1-202ENST00000463440 NIT1Q86X76 327 aa10.88□□□□□ -0.67
COL1A1-202ENST00000463440 Q8N3U1 123 aa10.88□□□□□ -0.67
COL1A1-202ENST00000463440 TM2D2Q9BX73 214 aa10.88□□□□□ -0.67
COL1A1-202ENST00000463440 EIF5A2Q9GZV4 153 aaKnown RBP10.88□□□□□ -0.67
COL1A1-202ENST00000463440 RPP21Q9H633 154 aaKnown RBP10.88□□□□□ -0.67
COL1A1-202ENST00000463440 DAZ3Q9NR90 486 aaKnown RBP10.88□□□□□ -0.67
COL1A1-202ENST00000463440 K7EN84 100 aa10.87□□□□□ -0.67
COL1A1-202ENST00000463440 MGPP08493 103 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms