RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 PGPEP1Q9NXJ5 209 aa8.9□□□□□ -0.98
HDAC1-203ENST00000463172 RYR1P21817 5038 aa8.89□□□□□ -0.99
HDAC1-203ENST00000463172 PRR27Q6MZM9 219 aa8.89□□□□□ -0.99
HDAC1-203ENST00000463172 Q6ZNX1 250 aa8.89□□□□□ -0.99
HDAC1-203ENST00000463172 Q6ZRN7 208 aaPredicted RBP8.89□□□□□ -0.99
HDAC1-203ENST00000463172 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.89□□□□□ -0.99
HDAC1-203ENST00000463172 C11orf52Q96A22 123 aa8.89□□□□□ -0.99
HDAC1-203ENST00000463172 MLST8Q9BVC4 326 aa8.89□□□□□ -0.99
HDAC1-203ENST00000463172 BIN3Q9NQY0 253 aa8.89□□□□□ -0.99
HDAC1-203ENST00000463172 TRBV10-1A0A0K0K1A3 114 aa8.88□□□□□ -0.99
HDAC1-203ENST00000463172 CDK2AP2O75956 126 aa8.88□□□□□ -0.99
HDAC1-203ENST00000463172 MEF2BQ02080 365 aaPredicted RBP8.88□□□□□ -0.99
HDAC1-203ENST00000463172 TOR2AQ5JU69 321 aa8.88□□□□□ -0.99
HDAC1-203ENST00000463172 SPANXN1Q5VSR9 72 aa8.88□□□□□ -0.99
HDAC1-203ENST00000463172 CDPF1Q6NVV7 123 aa8.88□□□□□ -0.99
HDAC1-203ENST00000463172 SMIM12Q96EX1 92 aa8.88□□□□□ -0.99
HDAC1-203ENST00000463172 JPT2Q9H910 190 aa8.88□□□□□ -0.99
HDAC1-203ENST00000463172 A0A087WWL8 130 aa8.87□□□□□ -0.99
HDAC1-203ENST00000463172 XKRY2A2RUG3 117 aa8.87□□□□□ -0.99
HDAC1-203ENST00000463172 GNG4P50150 75 aa8.87□□□□□ -0.99
HDAC1-203ENST00000463172 RPS20P60866 119 aaKnown RBP8.87□□□□□ -0.99
HDAC1-203ENST00000463172 CCL20P78556 96 aa8.87□□□□□ -0.99
HDAC1-203ENST00000463172 RPL36AP83881 106 aaKnown RBP8.87□□□□□ -0.99
HDAC1-203ENST00000463172 UFSP1Q6NVU6 142 aa8.87□□□□□ -0.99
HDAC1-203ENST00000463172 KCNIP4Q6PIL6 250 aa8.87□□□□□ -0.99
HDAC1-203ENST00000463172 RPL36ALQ969Q0 106 aaKnown RBP8.87□□□□□ -0.99
HDAC1-203ENST00000463172 SAMD10Q9BYL1 202 aa8.87□□□□□ -0.99
HDAC1-203ENST00000463172 URGCP-MRPS24S4R325 110 aa8.87□□□□□ -0.99
HDAC1-203ENST00000463172 IBA57-AS1B1ANH7 110 aa8.86□□□□□ -0.99
HDAC1-203ENST00000463172 OR5AL1P0C617 328 aa8.86□□□□□ -0.99
HDAC1-203ENST00000463172 SMIM17P0DL12 118 aa8.86□□□□□ -0.99
HDAC1-203ENST00000463172 LAGE3Q14657 143 aa8.86□□□□□ -0.99
HDAC1-203ENST00000463172 CENPWQ5EE01 88 aa8.86□□□□□ -0.99
HDAC1-203ENST00000463172 Q6ZSN1 163 aa8.86□□□□□ -0.99
HDAC1-203ENST00000463172 C14orf178Q8N769 122 aaPredicted RBP8.86□□□□□ -0.99
HDAC1-203ENST00000463172 TM2D2Q9BX73 214 aa8.86□□□□□ -0.99
HDAC1-203ENST00000463172 MED9Q9NWA0 146 aa8.86□□□□□ -0.99
HDAC1-203ENST00000463172 VAX2Q9UIW0 290 aa8.86□□□□□ -0.99
HDAC1-203ENST00000463172 SNAI2O43623 268 aa8.85□□□□□ -0.99
HDAC1-203ENST00000463172 IGHV3-30P01768 117 aa8.85□□□□□ -0.99
HDAC1-203ENST00000463172 IGHV3-33P01772 117 aa8.85□□□□□ -0.99
HDAC1-203ENST00000463172 IGHV3-30-3P0DP02 117 aa8.85□□□□□ -0.99
HDAC1-203ENST00000463172 IGHV3-30-5P0DP03 117 aa8.85□□□□□ -0.99
HDAC1-203ENST00000463172 BCL2P10415 239 aa8.85□□□□□ -0.99
HDAC1-203ENST00000463172 RAB4BP61018 213 aa8.85□□□□□ -0.99
HDAC1-203ENST00000463172 RPL19P84098 196 aaKnown RBP8.85□□□□□ -0.99
HDAC1-203ENST00000463172 ZNF56Q15929 161 aa8.85□□□□□ -0.99
HDAC1-203ENST00000463172 TNFRSF18Q9Y5U5 241 aa8.85□□□□□ -0.99
HDAC1-203ENST00000463172 hCG_2014768A0A024R1R8 64 aa8.84□□□□□ -0.99
HDAC1-203ENST00000463172 TRBV7-3A0A075B6L6 115 aa8.84□□□□□ -0.99
HDAC1-203ENST00000463172 A0A087WTM6 91 aa8.84□□□□□ -0.99
HDAC1-203ENST00000463172 TRAV8-3A0A0A6YYJ7 113 aa8.84□□□□□ -0.99
HDAC1-203ENST00000463172 LINC00694P0DN24 101 aa8.84□□□□□ -0.99
HDAC1-203ENST00000463172 KRTAP10-2P60368 255 aa8.84□□□□□ -0.99
HDAC1-203ENST00000463172 BLOC1S1P78537 153 aa8.84□□□□□ -0.99
HDAC1-203ENST00000463172 OR10AG1Q8NH19 301 aa8.84□□□□□ -0.99
HDAC1-203ENST00000463172 AP1S3Q96PC3 154 aa8.84□□□□□ -0.99
HDAC1-203ENST00000463172 SSBP4Q9BWG4 385 aaPredicted RBP8.84□□□□□ -0.99
HDAC1-203ENST00000463172 Q9HAA7 133 aa8.84□□□□□ -0.99
HDAC1-203ENST00000463172 F5H697 171 aa8.83□□□□□ -1
HDAC1-203ENST00000463172 P01737 135 aa8.83□□□□□ -1
HDAC1-203ENST00000463172 OR2D3Q8NGH3 330 aa8.83□□□□□ -1
HDAC1-203ENST00000463172 DERL1Q9BUN8 251 aa8.83□□□□□ -1
HDAC1-203ENST00000463172 COX11Q9Y6N1 276 aa8.83□□□□□ -1
HDAC1-203ENST00000463172 PCLOQ9Y6V0 5065 aa8.82□□□□□ -1
HDAC1-203ENST00000463172 PKIAP61925 76 aa8.82□□□□□ -1
HDAC1-203ENST00000463172 CACNG7P62955 275 aa8.82□□□□□ -1
HDAC1-203ENST00000463172 ELOBQ15370 118 aa8.82□□□□□ -1
HDAC1-203ENST00000463172 C9orf62Q8N4C0 152 aa8.82□□□□□ -1
HDAC1-203ENST00000463172 FER1L6-AS1Q8NA97 138 aa8.82□□□□□ -1
HDAC1-203ENST00000463172 RMI2Q96E14 147 aa8.82□□□□□ -1
HDAC1-203ENST00000463172 CHCHD7Q9BUK0 85 aa8.82□□□□□ -1
HDAC1-203ENST00000463172 TPPP3Q9BW30 176 aa8.82□□□□□ -1
HDAC1-203ENST00000463172 A0A087WX48 190 aa8.81□□□□□ -1
HDAC1-203ENST00000463172 RAB19A4D1S5 217 aa8.81□□□□□ -1
HDAC1-203ENST00000463172 F2Z2F3 143 aa8.81□□□□□ -1
HDAC1-203ENST00000463172 TMEM97Q5BJF2 176 aa8.81□□□□□ -1
HDAC1-203ENST00000463172 OR10G8Q8NGN5 311 aa8.81□□□□□ -1
HDAC1-203ENST00000463172 LRP1BQ9NZR2 4599 aa8.81□□□□□ -1
HDAC1-203ENST00000463172 DNAH5Q8TE73 4624 aa8.81□□□□□ -1
HDAC1-203ENST00000463172 H7C1H1 209 aa8.8□□□□□ -1
HDAC1-203ENST00000463172 UBE2D3P61077 147 aa8.8□□□□□ -1
HDAC1-203ENST00000463172 UBE2D2P62837 147 aa8.8□□□□□ -1
HDAC1-203ENST00000463172 MAPKAPK5-AS1Q8N8E1 139 aa8.8□□□□□ -1
HDAC1-203ENST00000463172 NTN5Q8WTR8 489 aaPredicted RBP8.8□□□□□ -1
HDAC1-203ENST00000463172 MUC21A0A0G2JKD1 596 aa8.79□□□□□ -1
HDAC1-203ENST00000463172 MUC21A0A140T8X8 626 aa8.79□□□□□ -1
HDAC1-203ENST00000463172 C19orf71A6NCJ1 209 aa8.79□□□□□ -1
HDAC1-203ENST00000463172 RBFOX3A6NFN3 312 aa8.79□□□□□ -1
HDAC1-203ENST00000463172 TRGC1P0CF51 173 aa8.79□□□□□ -1
HDAC1-203ENST00000463172 SSTP61278 116 aa8.79□□□□□ -1
HDAC1-203ENST00000463172 IGLV2-8P01709 118 aa8.78□□□□□ -1
HDAC1-203ENST00000463172 ALKAL2Q6UX46 152 aa8.78□□□□□ -1
HDAC1-203ENST00000463172 DAZ4Q86SG3 579 aaKnown RBP8.78□□□□□ -1
HDAC1-203ENST00000463172 NIT1Q86X76 327 aa8.78□□□□□ -1
HDAC1-203ENST00000463172 DAZ3Q9NR90 486 aaKnown RBP8.78□□□□□ -1
HDAC1-203ENST00000463172 Q9UF83 564 aa8.78□□□□□ -1
HDAC1-203ENST00000463172 IGLV5-52A0A0A0MRZ9 124 aa8.77□□□□□ -1.01
HDAC1-203ENST00000463172 TRBV6-8A0A0A6YYG3 113 aa8.77□□□□□ -1.01
HDAC1-203ENST00000463172 TMEM262E9PQX1 116 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms