RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	SMIM7	Q9BQ49	75 aa		6.63	□□□□□ -1.35
PSMD4-208	ENST00000462970	SCRT2	Q9NQ03	307 aa		6.63	□□□□□ -1.35
PSMD4-208	ENST00000462970	TRBV6-4	A0A1B0GX49	114 aa		6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	C19orf71	A6NCJ1	209 aa		6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	CXCL1	P09341	107 aa		6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	MED14OS	P0DP75	135 aa		6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	ZNF56	Q15929	161 aa		6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	SOHLH1	Q5JUK2	328 aa		6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	PIK3CD-AS1	Q5SR53	167 aa		6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	C1orf134	Q5TEV5	83 aa		6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	ZFP2	Q6ZN57	461 aa		6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	SH2D6	Q7Z4S9	175 aa		6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	ZNF575	Q86XF7	245 aa		6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	C14orf178	Q8N769	122 aa	Predicted RBP	6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	FER1L6-AS1	Q8NA97	138 aa		6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	NUDT10	Q8NFP7	164 aa		6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	NUDT11	Q96G61	164 aa		6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	SFRP2	Q96HF1	295 aa		6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	RNASE7	Q9H1E1	156 aa	Known RBP	6.62	□□□□□ -1.35
PSMD4-208	ENST00000462970	ZNF727	A8MUV8	499 aa		6.61	□□□□□ -1.35
PSMD4-208	ENST00000462970		F5H697	171 aa		6.61	□□□□□ -1.35
PSMD4-208	ENST00000462970		K7EN84	100 aa		6.61	□□□□□ -1.35
PSMD4-208	ENST00000462970	SIVA1	O15304	175 aa		6.61	□□□□□ -1.35
PSMD4-208	ENST00000462970	SRP19	P09132	144 aa	Known RBP	6.61	□□□□□ -1.35
PSMD4-208	ENST00000462970	SMIM17	P0DL12	118 aa		6.61	□□□□□ -1.35
PSMD4-208	ENST00000462970	TTC32	Q5I0X7	151 aa		6.61	□□□□□ -1.35
PSMD4-208	ENST00000462970		Q6ZR54	194 aa		6.61	□□□□□ -1.35
PSMD4-208	ENST00000462970	RPP21	Q9H633	154 aa	Known RBP	6.61	□□□□□ -1.35
PSMD4-208	ENST00000462970	KMT2A	Q03164	3969 aa		6.61	□□□□□ -1.35
PSMD4-208	ENST00000462970	SNAI2	O43623	268 aa		6.6	□□□□□ -1.35
PSMD4-208	ENST00000462970	GATC	O43716	136 aa	Known RBP	6.6	□□□□□ -1.35
PSMD4-208	ENST00000462970	CRYGD	P07320	174 aa		6.6	□□□□□ -1.35
PSMD4-208	ENST00000462970	MGP	P08493	103 aa		6.6	□□□□□ -1.35
PSMD4-208	ENST00000462970	OR5AL1	P0C617	328 aa		6.6	□□□□□ -1.35
PSMD4-208	ENST00000462970	RAB14	P61106	215 aa		6.6	□□□□□ -1.35
PSMD4-208	ENST00000462970	OR10J3	Q5JRS4	329 aa		6.6	□□□□□ -1.35
PSMD4-208	ENST00000462970	WFDC10B	Q8IUB3	73 aa		6.6	□□□□□ -1.35
PSMD4-208	ENST00000462970	ATP6V0E2	Q8NHE4	81 aa		6.6	□□□□□ -1.35
PSMD4-208	ENST00000462970	AP1S3	Q96PC3	154 aa		6.6	□□□□□ -1.35
PSMD4-208	ENST00000462970	UPK3B	Q9BT76	320 aa		6.6	□□□□□ -1.35
PSMD4-208	ENST00000462970	DNAH10	Q8IVF4	4471 aa		6.59	□□□□□ -1.35
PSMD4-208	ENST00000462970	PRSS29P	A6NIE9	313 aa		6.59	□□□□□ -1.35
PSMD4-208	ENST00000462970	RTL8C	O15255	209 aa		6.59	□□□□□ -1.35
PSMD4-208	ENST00000462970	ERVFC1-1	P60608	527 aa		6.59	□□□□□ -1.35
PSMD4-208	ENST00000462970	CACNG7	P62955	275 aa		6.59	□□□□□ -1.35
PSMD4-208	ENST00000462970	PEA15	Q15121	130 aa		6.59	□□□□□ -1.35
PSMD4-208	ENST00000462970	UFSP1	Q6NVU6	142 aa		6.59	□□□□□ -1.35
PSMD4-208	ENST00000462970	LYZL1	Q6UWQ5	148 aa		6.59	□□□□□ -1.35
PSMD4-208	ENST00000462970	C6orf223	Q8N319	242 aa		6.59	□□□□□ -1.35
PSMD4-208	ENST00000462970	SSBP4	Q9BWG4	385 aa	Predicted RBP	6.59	□□□□□ -1.35
PSMD4-208	ENST00000462970		Q9UF83	564 aa		6.59	□□□□□ -1.35
PSMD4-208	ENST00000462970	TRAV8-6	A0A0B4J262	113 aa		6.58	□□□□□ -1.36
PSMD4-208	ENST00000462970	IGLC6	P0CF74	106 aa		6.58	□□□□□ -1.36
PSMD4-208	ENST00000462970	SRSF3	P84103	164 aa	Known RBP	6.58	□□□□□ -1.36
PSMD4-208	ENST00000462970	LINC00336	Q6ZUF6	198 aa		6.58	□□□□□ -1.36
PSMD4-208	ENST00000462970	KRTAP1-5	Q9BYS1	174 aa		6.58	□□□□□ -1.36
PSMD4-208	ENST00000462970	MSRB1	Q9NZV6	116 aa		6.58	□□□□□ -1.36
PSMD4-208	ENST00000462970	LY96	Q9Y6Y9	160 aa		6.58	□□□□□ -1.36
PSMD4-208	ENST00000462970	TRAV9-2	A0A087WT02	112 aa		6.57	□□□□□ -1.36
PSMD4-208	ENST00000462970		A0A1W2PPQ1	181 aa		6.57	□□□□□ -1.36
PSMD4-208	ENST00000462970		C9JQL5	133 aa		6.57	□□□□□ -1.36
PSMD4-208	ENST00000462970		F2Z2F3	143 aa		6.57	□□□□□ -1.36
PSMD4-208	ENST00000462970	EVI2A	P22794	236 aa		6.57	□□□□□ -1.36
PSMD4-208	ENST00000462970	RAB4B	P61018	213 aa		6.57	□□□□□ -1.36
PSMD4-208	ENST00000462970	RPL36A	P83881	106 aa	Known RBP	6.57	□□□□□ -1.36
PSMD4-208	ENST00000462970	TWIST1	Q15672	202 aa		6.57	□□□□□ -1.36
PSMD4-208	ENST00000462970	ADIRF	Q15847	76 aa		6.57	□□□□□ -1.36
PSMD4-208	ENST00000462970	TMEM241	Q24JQ0	296 aa		6.57	□□□□□ -1.36
PSMD4-208	ENST00000462970	RPL36AL	Q969Q0	106 aa	Known RBP	6.57	□□□□□ -1.36
PSMD4-208	ENST00000462970	PGLYRP4	Q96LB8	373 aa		6.57	□□□□□ -1.36
PSMD4-208	ENST00000462970	GTSF1L	Q9H1H1	148 aa		6.57	□□□□□ -1.36
PSMD4-208	ENST00000462970		A8MWL6	223 aa		6.56	□□□□□ -1.36
PSMD4-208	ENST00000462970	EIF4EBP3	O60516	100 aa	Predicted RBP	6.56	□□□□□ -1.36
PSMD4-208	ENST00000462970	IGHV3-30	P01768	117 aa		6.56	□□□□□ -1.36
PSMD4-208	ENST00000462970	IGHV3-33	P01772	117 aa		6.56	□□□□□ -1.36
PSMD4-208	ENST00000462970	TRGC1	P0CF51	173 aa		6.56	□□□□□ -1.36
PSMD4-208	ENST00000462970	IGHV3-30-3	P0DP02	117 aa		6.56	□□□□□ -1.36
PSMD4-208	ENST00000462970	IGHV3-30-5	P0DP03	117 aa		6.56	□□□□□ -1.36
PSMD4-208	ENST00000462970	NTF3	P20783	257 aa		6.56	□□□□□ -1.36
PSMD4-208	ENST00000462970	FAM74A3	Q4VXF1	159 aa		6.56	□□□□□ -1.36
PSMD4-208	ENST00000462970	LINC01551	Q86U37	167 aa		6.56	□□□□□ -1.36
PSMD4-208	ENST00000462970	C15orf54	Q8N8G6	183 aa		6.56	□□□□□ -1.36
PSMD4-208	ENST00000462970	BORCS7	Q96B45	105 aa		6.56	□□□□□ -1.36
PSMD4-208	ENST00000462970	KRTAP17-1	Q9BYP8	105 aa		6.56	□□□□□ -1.36
PSMD4-208	ENST00000462970	IGHV3-38	A0A0C4DH36	116 aa		6.55	□□□□□ -1.36
PSMD4-208	ENST00000462970	NDUFS6	O75380	124 aa	Known RBP	6.55	□□□□□ -1.36
PSMD4-208	ENST00000462970	CTRL	P40313	264 aa		6.55	□□□□□ -1.36
PSMD4-208	ENST00000462970	TIRAP	P58753	221 aa		6.55	□□□□□ -1.36
PSMD4-208	ENST00000462970	LINC00315	P59091	139 aa		6.55	□□□□□ -1.36
PSMD4-208	ENST00000462970	LELP1	Q5T871	98 aa		6.55	□□□□□ -1.36
PSMD4-208	ENST00000462970	FAM231D	Q6ZW35	169 aa		6.55	□□□□□ -1.36
PSMD4-208	ENST00000462970	SMIM15	Q7Z3B0	74 aa		6.55	□□□□□ -1.36
PSMD4-208	ENST00000462970	TNFRSF18	Q9Y5U5	241 aa		6.55	□□□□□ -1.36
PSMD4-208	ENST00000462970	FRAS1	Q86XX4	4008 aa		6.54	□□□□□ -1.36
PSMD4-208	ENST00000462970	TRBV7-3	A0A075B6L6	115 aa		6.54	□□□□□ -1.36
PSMD4-208	ENST00000462970		A0A087WWC5	75 aa		6.54	□□□□□ -1.36
PSMD4-208	ENST00000462970	TRBV10-1	A0A0K0K1A3	114 aa		6.54	□□□□□ -1.36
PSMD4-208	ENST00000462970	LINC00694	P0DN24	101 aa		6.54	□□□□□ -1.36
PSMD4-208	ENST00000462970	RPL23	P62829	140 aa	Known RBP	6.54	□□□□□ -1.36
PSMD4-208	ENST00000462970	SUMO4	Q6EEV6	95 aa		6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms