RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 MCRIP2Q9BUT9 160 aaKnown RBP5.34□□□□□ -1.55
UBE4B-204ENST00000462658 GFRA4Q9GZZ7 299 aa5.34□□□□□ -1.55
UBE4B-204ENST00000462658 HLA-DRB4X5D2U9 266 aa5.34□□□□□ -1.55
UBE4B-204ENST00000462658 A8MTW9 85 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 HIGD1CA8MV81 97 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 KLLNB2CW77 178 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 M0R2Z0 102 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 SPINK4O60575 86 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 TYMSP04818 313 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 CD7P09564 240 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 CDKN1BP46527 198 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 FOXA3P55318 350 aaPredicted RBP5.33□□□□□ -1.56
UBE4B-204ENST00000462658 ZNF415Q09FC8 603 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 Q6AWC8 147 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 AMTNQ6UX39 209 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 Q6ZQT7 251 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 NUP35Q8NFH5 326 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 GTSF1Q8WW33 167 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 PGLYRP4Q96LB8 373 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 SRD5A3Q9H8P0 318 aa5.33□□□□□ -1.56
UBE4B-204ENST00000462658 HUWE1Q7Z6Z7 4374 aaKnown RBP5.32□□□□□ -1.56
UBE4B-204ENST00000462658 TRAV12-2A0A075B6T6 113 aa5.32□□□□□ -1.56
UBE4B-204ENST00000462658 IGKV3D-20A0A0C4DH25 116 aa5.32□□□□□ -1.56
UBE4B-204ENST00000462658 C7orf71A4D174 169 aa5.32□□□□□ -1.56
UBE4B-204ENST00000462658 GRIFINA4D1Z8 144 aa5.32□□□□□ -1.56
UBE4B-204ENST00000462658 UBE2CO00762 179 aa5.32□□□□□ -1.56
UBE4B-204ENST00000462658 IGLL1P15814 213 aa5.32□□□□□ -1.56
UBE4B-204ENST00000462658 FXYD7P58549 80 aa5.32□□□□□ -1.56
UBE4B-204ENST00000462658 SPINK13Q1W4C9 94 aa5.32□□□□□ -1.56
UBE4B-204ENST00000462658 MRPL54Q6P161 138 aaKnown RBP5.32□□□□□ -1.56
UBE4B-204ENST00000462658 STHQ8IWL8 128 aa5.32□□□□□ -1.56
UBE4B-204ENST00000462658 TPPP3Q9BW30 176 aa5.32□□□□□ -1.56
UBE4B-204ENST00000462658 NAGKQ9UJ70 344 aa5.32□□□□□ -1.56
UBE4B-204ENST00000462658 MEGF8Q7Z7M0 2845 aa5.32□□□□□ -1.56
UBE4B-204ENST00000462658 SORL1Q92673 2214 aa5.31□□□□□ -1.56
UBE4B-204ENST00000462658 TRAV12-3A0A0B4J271 114 aa5.31□□□□□ -1.56
UBE4B-204ENST00000462658 RBMY1BA6NDE4 496 aaKnown RBP5.31□□□□□ -1.56
UBE4B-204ENST00000462658 RBMY1EA6NEQ0 496 aaKnown RBP5.31□□□□□ -1.56
UBE4B-204ENST00000462658 C1orf196B1AJZ1 125 aa5.31□□□□□ -1.56
UBE4B-204ENST00000462658 ZNF324O75467 553 aaPredicted RBP5.31□□□□□ -1.56
UBE4B-204ENST00000462658 TRGC2P03986 189 aa5.31□□□□□ -1.56
UBE4B-204ENST00000462658 RBMY1DP0C7P1 496 aaKnown RBP5.31□□□□□ -1.56
UBE4B-204ENST00000462658 COX19Q49B96 90 aa5.31□□□□□ -1.56
UBE4B-204ENST00000462658 MUC21Q5SSG8 566 aa5.31□□□□□ -1.56
UBE4B-204ENST00000462658 LYZL1Q6UWQ5 148 aa5.31□□□□□ -1.56
UBE4B-204ENST00000462658 ATP5L2Q7Z4Y8 100 aa5.31□□□□□ -1.56
UBE4B-204ENST00000462658 FER1L6-AS1Q8NA97 138 aa5.31□□□□□ -1.56
UBE4B-204ENST00000462658 TRAPPC1Q9Y5R8 145 aa5.31□□□□□ -1.56
UBE4B-204ENST00000462658 A0A1B0GUT8 65 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 CRXO43186 299 aaPredicted RBP5.3□□□□□ -1.56
UBE4B-204ENST00000462658 GNRH2O43555 120 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 ARMS2P0C7Q2 107 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 IGLC6P0CF74 106 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 RAB4BP61018 213 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 RAB5BP61020 215 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 NUTF2P61970 127 aaKnown RBP5.3□□□□□ -1.56
UBE4B-204ENST00000462658 HBBP68871 147 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 RIGQ13278 110 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 RASL11AQ6T310 242 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 FAM159AQ6UWV7 190 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 NOTCH2NLQ7Z3S9 236 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 GTSCR1Q86UQ5 136 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 BORCS7Q96B45 105 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 PRAC1Q96KF2 57 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 KCNS1Q96KK3 526 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 GNB1LQ9BYB4 327 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 WFDC10AQ9H1F0 79 aa5.3□□□□□ -1.56
UBE4B-204ENST00000462658 IGHV1OR15-1A0A075B7D0 117 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 MUC21A0A0G2JKD1 596 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 MUC21A0A140T8X8 626 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 A0A1B0GW15 77 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 A0A1B0GXF2 115 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 SNURFLB1AK76 121 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 F2Z2F3 143 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 MT-ND6P03923 174 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 S100A4P26447 101 aaKnown RBP5.29□□□□□ -1.56
UBE4B-204ENST00000462658 ASIPP42127 132 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 SSTP61278 116 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 FABP9Q0Z7S8 132 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 TMEM136Q6ZRR5 245 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 ZFP82Q8N141 532 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 DEFB125Q8N687 156 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 FRZBQ92765 325 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 DNAH7Q8WXX0 4024 aa5.29□□□□□ -1.56
UBE4B-204ENST00000462658 NOTCH1P46531 2555 aa5.28□□□□□ -1.56
UBE4B-204ENST00000462658 PHOX2AO14813 284 aa5.28□□□□□ -1.56
UBE4B-204ENST00000462658 SNAI2O43623 268 aa5.28□□□□□ -1.56
UBE4B-204ENST00000462658 INSP01308 110 aa5.28□□□□□ -1.56
UBE4B-204ENST00000462658 HLA-DQA1P01909 254 aa5.28□□□□□ -1.56
UBE4B-204ENST00000462658 S100A8P05109 93 aa5.28□□□□□ -1.56
UBE4B-204ENST00000462658 OR5AL1P0C617 328 aa5.28□□□□□ -1.56
UBE4B-204ENST00000462658 RBMY1A1P0DJD3 496 aaKnown RBP5.28□□□□□ -1.56
UBE4B-204ENST00000462658 RBMY1CP0DJD4 496 aa5.28□□□□□ -1.56
UBE4B-204ENST00000462658 RPL35AP18077 110 aaKnown RBP5.28□□□□□ -1.56
UBE4B-204ENST00000462658 NTF3P20783 257 aa5.28□□□□□ -1.56
UBE4B-204ENST00000462658 CTRLP40313 264 aa5.28□□□□□ -1.56
UBE4B-204ENST00000462658 RBMY1FQ15415 496 aaKnown RBP5.28□□□□□ -1.56
UBE4B-204ENST00000462658 TDRG1Q3Y452 100 aa5.28□□□□□ -1.56
UBE4B-204ENST00000462658 DNLZQ5SXM8 178 aa5.28□□□□□ -1.56
UBE4B-204ENST00000462658 LINC00518Q8N0U6 118 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms