RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 GAGE1Q13065 139 aa12.63□□□□□ -0.39
CDKN1A-206ENST00000462537 GAGE4Q13068 117 aa12.63□□□□□ -0.39
CDKN1A-206ENST00000462537 GAGE5Q13069 117 aa12.63□□□□□ -0.39
CDKN1A-206ENST00000462537 GAGE13Q4V321 117 aa12.63□□□□□ -0.39
CDKN1A-206ENST00000462537 OR10J3Q5JRS4 329 aa12.63□□□□□ -0.39
CDKN1A-206ENST00000462537 SPANXN1Q5VSR9 72 aa12.63□□□□□ -0.39
CDKN1A-206ENST00000462537 C14orf178Q8N769 122 aaPredicted RBP12.63□□□□□ -0.39
CDKN1A-206ENST00000462537 SMIM12Q96EX1 92 aa12.63□□□□□ -0.39
CDKN1A-206ENST00000462537 TRAV8-6A0A0B4J262 113 aa12.62□□□□□ -0.39
CDKN1A-206ENST00000462537 SSTP61278 116 aa12.62□□□□□ -0.39
CDKN1A-206ENST00000462537 OR2D3Q8NGH3 330 aa12.62□□□□□ -0.39
CDKN1A-206ENST00000462537 TRBV20OR9-2A0A075B6H5 130 aa12.61□□□□□ -0.39
CDKN1A-206ENST00000462537 RBFOX3A6NFN3 312 aa12.61□□□□□ -0.39
CDKN1A-206ENST00000462537 SNAI2O43623 268 aa12.61□□□□□ -0.39
CDKN1A-206ENST00000462537 P01737 135 aa12.61□□□□□ -0.39
CDKN1A-206ENST00000462537 CRYGDP07320 174 aa12.61□□□□□ -0.39
CDKN1A-206ENST00000462537 OR5AL1P0C617 328 aa12.61□□□□□ -0.39
CDKN1A-206ENST00000462537 BTF3P20290 206 aaKnown RBP12.61□□□□□ -0.39
CDKN1A-206ENST00000462537 GTSF1LQ9H1H1 148 aa12.61□□□□□ -0.39
CDKN1A-206ENST00000462537 BIN3Q9NQY0 253 aa12.61□□□□□ -0.39
CDKN1A-206ENST00000462537 DNAH10OSP0CZ25 163 aa12.6□□□□□ -0.39
CDKN1A-206ENST00000462537 GZMBP10144 247 aa12.6□□□□□ -0.39
CDKN1A-206ENST00000462537 RPS20P60866 119 aaKnown RBP12.6□□□□□ -0.39
CDKN1A-206ENST00000462537 TPPP3Q9BW30 176 aa12.6□□□□□ -0.39
CDKN1A-206ENST00000462537 SSBP4Q9BWG4 385 aaPredicted RBP12.6□□□□□ -0.39
CDKN1A-206ENST00000462537 IGHV3-38A0A0C4DH36 116 aa12.59□□□□□ -0.39
CDKN1A-206ENST00000462537 C19orf71A6NCJ1 209 aa12.59□□□□□ -0.39
CDKN1A-206ENST00000462537 ZNF56Q15929 161 aa12.59□□□□□ -0.39
CDKN1A-206ENST00000462537 LELP1Q5T871 98 aa12.59□□□□□ -0.39
CDKN1A-206ENST00000462537 Q9UF83 564 aa12.59□□□□□ -0.39
CDKN1A-206ENST00000462537 XKRY2A2RUG3 117 aa12.58□□□□□ -0.4
CDKN1A-206ENST00000462537 CEBPGP53567 150 aa12.58□□□□□ -0.4
CDKN1A-206ENST00000462537 TOR2AQ5JU69 321 aa12.58□□□□□ -0.4
CDKN1A-206ENST00000462537 LYPD6BQ8NI32 183 aa12.58□□□□□ -0.4
CDKN1A-206ENST00000462537 TNFRSF18Q9Y5U5 241 aa12.58□□□□□ -0.4
CDKN1A-206ENST00000462537 K7EP13 123 aa12.57□□□□□ -0.4
CDKN1A-206ENST00000462537 LINC00694P0DN24 101 aa12.57□□□□□ -0.4
CDKN1A-206ENST00000462537 NFE4Q86UQ8 179 aa12.57□□□□□ -0.4
CDKN1A-206ENST00000462537 C10orf126Q8N4M7 172 aa12.57□□□□□ -0.4
CDKN1A-206ENST00000462537 FER1L6-AS1Q8NA97 138 aa12.57□□□□□ -0.4
CDKN1A-206ENST00000462537 EIF5A2Q9GZV4 153 aaKnown RBP12.57□□□□□ -0.4
CDKN1A-206ENST00000462537 MSRB1Q9NZV6 116 aa12.57□□□□□ -0.4
CDKN1A-206ENST00000462537 PKD1P98161 4303 aa12.56□□□□□ -0.4
CDKN1A-206ENST00000462537 TMEM250H0YL14 139 aa12.56□□□□□ -0.4
CDKN1A-206ENST00000462537 SMIM17P0DL12 118 aa12.56□□□□□ -0.4
CDKN1A-206ENST00000462537 AP1S3Q96PC3 154 aa12.56□□□□□ -0.4
CDKN1A-206ENST00000462537 F5H697 171 aa12.55□□□□□ -0.4
CDKN1A-206ENST00000462537 IGLC6P0CF74 106 aa12.55□□□□□ -0.4
CDKN1A-206ENST00000462537 RAB4BP61018 213 aa12.55□□□□□ -0.4
CDKN1A-206ENST00000462537 RPL36AP83881 106 aaKnown RBP12.55□□□□□ -0.4
CDKN1A-206ENST00000462537 LINC01556Q5JQF7 62 aa12.55□□□□□ -0.4
CDKN1A-206ENST00000462537 OCC1Q8TAD7 63 aa12.55□□□□□ -0.4
CDKN1A-206ENST00000462537 RPL36ALQ969Q0 106 aaKnown RBP12.55□□□□□ -0.4
CDKN1A-206ENST00000462537 TRBV10-1A0A0K0K1A3 114 aa12.54□□□□□ -0.4
CDKN1A-206ENST00000462537 IGHV3-30P01768 117 aa12.54□□□□□ -0.4
CDKN1A-206ENST00000462537 IGHV3-33P01772 117 aa12.54□□□□□ -0.4
CDKN1A-206ENST00000462537 IGHV3-30-3P0DP02 117 aa12.54□□□□□ -0.4
CDKN1A-206ENST00000462537 IGHV3-30-5P0DP03 117 aa12.54□□□□□ -0.4
CDKN1A-206ENST00000462537 Q6ZRN7 208 aaPredicted RBP12.54□□□□□ -0.4
CDKN1A-206ENST00000462537 NUDT10Q8NFP7 164 aa12.54□□□□□ -0.4
CDKN1A-206ENST00000462537 NUDT11Q96G61 164 aa12.54□□□□□ -0.4
CDKN1A-206ENST00000462537 RNASE7Q9H1E1 156 aaKnown RBP12.54□□□□□ -0.4
CDKN1A-206ENST00000462537 A0A087WWC5 75 aa12.53□□□□□ -0.4
CDKN1A-206ENST00000462537 K7EN84 100 aa12.53□□□□□ -0.4
CDKN1A-206ENST00000462537 CACNG7P62955 275 aa12.53□□□□□ -0.4
CDKN1A-206ENST00000462537 C16orf90A8MZG2 172 aa12.52□□□□□ -0.41
CDKN1A-206ENST00000462537 LYZL1Q6UWQ5 148 aa12.52□□□□□ -0.41
CDKN1A-206ENST00000462537 SPATA12Q7Z6I5 190 aa12.52□□□□□ -0.41
CDKN1A-206ENST00000462537 FAM210AQ96ND0 272 aa12.52□□□□□ -0.41
CDKN1A-206ENST00000462537 RPP21Q9H633 154 aaKnown RBP12.52□□□□□ -0.41
CDKN1A-206ENST00000462537 PKHD1P08F94 4074 aa12.52□□□□□ -0.41
CDKN1A-206ENST00000462537 TRBV7-3A0A075B6L6 115 aa12.51□□□□□ -0.41
CDKN1A-206ENST00000462537 F2Z2F3 143 aa12.51□□□□□ -0.41
CDKN1A-206ENST00000462537 MGPP08493 103 aa12.51□□□□□ -0.41
CDKN1A-206ENST00000462537 EREGO14944 169 aa12.5□□□□□ -0.41
CDKN1A-206ENST00000462537 ERVFC1-1P60608 527 aa12.5□□□□□ -0.41
CDKN1A-206ENST00000462537 UBE2D3P61077 147 aa12.5□□□□□ -0.41
CDKN1A-206ENST00000462537 UBE2D2P62837 147 aa12.5□□□□□ -0.41
CDKN1A-206ENST00000462537 NEXN-AS1Q8NBZ9 246 aa12.5□□□□□ -0.41
CDKN1A-206ENST00000462537 SMIM7Q9BQ49 75 aa12.5□□□□□ -0.41
CDKN1A-206ENST00000462537 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.49□□□□□ -0.41
CDKN1A-206ENST00000462537 OR10G8Q8NGN5 311 aa12.49□□□□□ -0.41
CDKN1A-206ENST00000462537 Q9HAA7 133 aa12.49□□□□□ -0.41
CDKN1A-206ENST00000462537 KIF25-AS1Q9Y6Z4 181 aa12.49□□□□□ -0.41
CDKN1A-206ENST00000462537 IBA57-AS1B1ANH7 110 aa12.48□□□□□ -0.41
CDKN1A-206ENST00000462537 PSCAO43653 123 aa12.48□□□□□ -0.41
CDKN1A-206ENST00000462537 GATCO43716 136 aaKnown RBP12.48□□□□□ -0.41
CDKN1A-206ENST00000462537 TRGC1P0CF51 173 aa12.48□□□□□ -0.41
CDKN1A-206ENST00000462537 TEX261Q6UWH6 196 aa12.48□□□□□ -0.41
CDKN1A-206ENST00000462537 Q8N3U1 123 aa12.48□□□□□ -0.41
CDKN1A-206ENST00000462537 NTF3P20783 257 aa12.47□□□□□ -0.41
CDKN1A-206ENST00000462537 CTRLP40313 264 aa12.47□□□□□ -0.41
CDKN1A-206ENST00000462537 URGCP-MRPS24S4R325 110 aa12.47□□□□□ -0.41
CDKN1A-206ENST00000462537 ZNF727A8MUV8 499 aa12.46□□□□□ -0.41
CDKN1A-206ENST00000462537 NDUFS6O75380 124 aaKnown RBP12.46□□□□□ -0.41
CDKN1A-206ENST00000462537 SRP19P09132 144 aaKnown RBP12.46□□□□□ -0.41
CDKN1A-206ENST00000462537 KRTAP10-2P60368 255 aa12.46□□□□□ -0.41
CDKN1A-206ENST00000462537 H7C1H1 209 aa12.45□□□□□ -0.42
CDKN1A-206ENST00000462537 TWIST1Q15672 202 aa12.45□□□□□ -0.42
CDKN1A-206ENST00000462537 KCNIP4Q6PIL6 250 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 304.6 ms