RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 SMIM17P0DL12 118 aa8.77□□□□□ -1.01
HDAC4-207ENST00000461113 HOXA5P20719 270 aa8.77□□□□□ -1.01
HDAC4-207ENST00000461113 CACNG7P62955 275 aa8.77□□□□□ -1.01
HDAC4-207ENST00000461113 SRSF3P84103 164 aaKnown RBP8.77□□□□□ -1.01
HDAC4-207ENST00000461113 ADIRFQ15847 76 aa8.77□□□□□ -1.01
HDAC4-207ENST00000461113 CFAP126Q5VTH2 177 aa8.77□□□□□ -1.01
HDAC4-207ENST00000461113 FAM231DQ6ZW35 169 aa8.77□□□□□ -1.01
HDAC4-207ENST00000461113 LINC01551Q86U37 167 aa8.77□□□□□ -1.01
HDAC4-207ENST00000461113 Q8N1X5 172 aa8.77□□□□□ -1.01
HDAC4-207ENST00000461113 BORCS7Q96B45 105 aa8.77□□□□□ -1.01
HDAC4-207ENST00000461113 ZNF479Q96JC4 524 aa8.77□□□□□ -1.01
HDAC4-207ENST00000461113 PRADC1Q9BSG0 188 aa8.77□□□□□ -1.01
HDAC4-207ENST00000461113 SCRT2Q9NQ03 307 aa8.77□□□□□ -1.01
HDAC4-207ENST00000461113 SNAI2O43623 268 aa8.76□□□□□ -1.01
HDAC4-207ENST00000461113 CCL18P55774 89 aa8.76□□□□□ -1.01
HDAC4-207ENST00000461113 FHL2Q14192 279 aa8.76□□□□□ -1.01
HDAC4-207ENST00000461113 UQCC3Q6UW78 93 aa8.76□□□□□ -1.01
HDAC4-207ENST00000461113 ZFP2Q6ZN57 461 aa8.76□□□□□ -1.01
HDAC4-207ENST00000461113 ICOSQ9Y6W8 199 aa8.76□□□□□ -1.01
HDAC4-207ENST00000461113 C9JQL5 133 aa8.75□□□□□ -1.01
HDAC4-207ENST00000461113 GZMBP10144 247 aa8.75□□□□□ -1.01
HDAC4-207ENST00000461113 CRYBA4P53673 196 aa8.75□□□□□ -1.01
HDAC4-207ENST00000461113 SSTP61278 116 aa8.75□□□□□ -1.01
HDAC4-207ENST00000461113 MRPL23Q16540 153 aaKnown RBP8.75□□□□□ -1.01
HDAC4-207ENST00000461113 CT83Q5H943 113 aa8.75□□□□□ -1.01
HDAC4-207ENST00000461113 FAM74A4Q5TZK3 123 aa8.75□□□□□ -1.01
HDAC4-207ENST00000461113 SMIM15Q7Z3B0 74 aa8.75□□□□□ -1.01
HDAC4-207ENST00000461113 SFRP2Q96HF1 295 aa8.75□□□□□ -1.01
HDAC4-207ENST00000461113 SSBP4Q9BWG4 385 aaPredicted RBP8.75□□□□□ -1.01
HDAC4-207ENST00000461113 OSTCQ9NRP0 149 aa8.75□□□□□ -1.01
HDAC4-207ENST00000461113 IGHV3-73A0A0B4J1V6 119 aa8.74□□□□□ -1.01
HDAC4-207ENST00000461113 RPL23P62829 140 aaKnown RBP8.74□□□□□ -1.01
HDAC4-207ENST00000461113 RHOHQ15669 191 aa8.74□□□□□ -1.01
HDAC4-207ENST00000461113 WDR73Q6P4I2 378 aa8.74□□□□□ -1.01
HDAC4-207ENST00000461113 SH2D6Q7Z4S9 175 aa8.74□□□□□ -1.01
HDAC4-207ENST00000461113 POM121L12Q8N7R1 296 aa8.74□□□□□ -1.01
HDAC4-207ENST00000461113 OR10G8Q8NGN5 311 aa8.74□□□□□ -1.01
HDAC4-207ENST00000461113 OR10AG1Q8NH19 301 aa8.74□□□□□ -1.01
HDAC4-207ENST00000461113 AP1S3Q96PC3 154 aa8.74□□□□□ -1.01
HDAC4-207ENST00000461113 DMBT1Q9UGM3 2413 aaPredicted RBP8.74□□□□□ -1.01
HDAC4-207ENST00000461113 MUC21A0A0G2JKD1 596 aa8.73□□□□□ -1.01
HDAC4-207ENST00000461113 MUC21A0A140T8X8 626 aa8.73□□□□□ -1.01
HDAC4-207ENST00000461113 TRBV6-4A0A1B0GX49 114 aa8.73□□□□□ -1.01
HDAC4-207ENST00000461113 C16orf90A8MZG2 172 aa8.73□□□□□ -1.01
HDAC4-207ENST00000461113 TRGC1P0CF51 173 aa8.73□□□□□ -1.01
HDAC4-207ENST00000461113 GYPEP15421 78 aa8.73□□□□□ -1.01
HDAC4-207ENST00000461113 GATA1P15976 413 aaPredicted RBP8.73□□□□□ -1.01
HDAC4-207ENST00000461113 SRIP30626 198 aa8.73□□□□□ -1.01
HDAC4-207ENST00000461113 PNRC1Q12796 327 aaPredicted RBP8.73□□□□□ -1.01
HDAC4-207ENST00000461113 LYZL1Q6UWQ5 148 aa8.73□□□□□ -1.01
HDAC4-207ENST00000461113 COMMD7Q86VX2 200 aa8.73□□□□□ -1.01
HDAC4-207ENST00000461113 ISOC2Q96AB3 205 aa8.73□□□□□ -1.01
HDAC4-207ENST00000461113 APOBP04114 4563 aaKnown RBP8.73□□□□□ -1.01
HDAC4-207ENST00000461113 A0A087WWL8 130 aa8.72□□□□□ -1.01
HDAC4-207ENST00000461113 F5H697 171 aa8.72□□□□□ -1.01
HDAC4-207ENST00000461113 NXPH4O95158 308 aa8.72□□□□□ -1.01
HDAC4-207ENST00000461113 IGLC6P0CF74 106 aa8.72□□□□□ -1.01
HDAC4-207ENST00000461113 FAM3BP58499 235 aaPredicted RBP8.72□□□□□ -1.01
HDAC4-207ENST00000461113 RNF212Q495C1 297 aa8.72□□□□□ -1.01
HDAC4-207ENST00000461113 TSKUQ8WUA8 353 aa8.72□□□□□ -1.01
HDAC4-207ENST00000461113 VSIG2Q96IQ7 327 aa8.72□□□□□ -1.01
HDAC4-207ENST00000461113 GFRA4Q9GZZ7 299 aa8.72□□□□□ -1.01
HDAC4-207ENST00000461113 LRP1BQ9NZR2 4599 aa8.71□□□□□ -1.01
HDAC4-207ENST00000461113 FAM231BA6NCW3 169 aa8.71□□□□□ -1.02
HDAC4-207ENST00000461113 PPP1R2P9O14990 202 aa8.71□□□□□ -1.02
HDAC4-207ENST00000461113 TWIST1Q15672 202 aa8.71□□□□□ -1.02
HDAC4-207ENST00000461113 ZNF56Q15929 161 aa8.71□□□□□ -1.02
HDAC4-207ENST00000461113 NEGR1Q7Z3B1 354 aa8.71□□□□□ -1.02
HDAC4-207ENST00000461113 F8W036 122 aa8.7□□□□□ -1.02
HDAC4-207ENST00000461113 K7EQD1 137 aa8.7□□□□□ -1.02
HDAC4-207ENST00000461113 CTRLP40313 264 aa8.7□□□□□ -1.02
HDAC4-207ENST00000461113 RAB4BP61018 213 aa8.7□□□□□ -1.02
HDAC4-207ENST00000461113 C14orf178Q8N769 122 aaPredicted RBP8.7□□□□□ -1.02
HDAC4-207ENST00000461113 SLC25A29Q8N8R3 303 aa8.7□□□□□ -1.02
HDAC4-207ENST00000461113 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.7□□□□□ -1.02
HDAC4-207ENST00000461113 PGLYRP4Q96LB8 373 aa8.7□□□□□ -1.02
HDAC4-207ENST00000461113 SAMD10Q9BYL1 202 aa8.7□□□□□ -1.02
HDAC4-207ENST00000461113 JPT2Q9H910 190 aa8.7□□□□□ -1.02
HDAC4-207ENST00000461113 A0A096LPF7 62 aa8.69□□□□□ -1.02
HDAC4-207ENST00000461113 TMEM218A2RU14 115 aa8.69□□□□□ -1.02
HDAC4-207ENST00000461113 LINC00862A6NCI5 91 aa8.69□□□□□ -1.02
HDAC4-207ENST00000461113 MT-ND4LP03901 98 aa8.69□□□□□ -1.02
HDAC4-207ENST00000461113 CRYGDP07320 174 aa8.69□□□□□ -1.02
HDAC4-207ENST00000461113 MGPP08493 103 aa8.69□□□□□ -1.02
HDAC4-207ENST00000461113 NTF3P20783 257 aa8.69□□□□□ -1.02
HDAC4-207ENST00000461113 TRBV10-1A0A0K0K1A3 114 aa8.68□□□□□ -1.02
HDAC4-207ENST00000461113 A0A1B0GUT8 65 aa8.68□□□□□ -1.02
HDAC4-207ENST00000461113 HIGD1CA8MV81 97 aa8.68□□□□□ -1.02
HDAC4-207ENST00000461113 H7C1H1 209 aa8.68□□□□□ -1.02
HDAC4-207ENST00000461113 FOXA3P55318 350 aaPredicted RBP8.68□□□□□ -1.02
HDAC4-207ENST00000461113 RIGQ13278 110 aa8.68□□□□□ -1.02
HDAC4-207ENST00000461113 GTSF1Q8WW33 167 aa8.68□□□□□ -1.02
HDAC4-207ENST00000461113 DPH3P1Q9H4G8 78 aa8.68□□□□□ -1.02
HDAC4-207ENST00000461113 NAT8BQ9UHF3 227 aa8.68□□□□□ -1.02
HDAC4-207ENST00000461113 V9GYV3 84 aa8.68□□□□□ -1.02
HDAC4-207ENST00000461113 IGLV2-18A0A075B6J9 118 aa8.67□□□□□ -1.02
HDAC4-207ENST00000461113 RPL36AP83881 106 aaKnown RBP8.67□□□□□ -1.02
HDAC4-207ENST00000461113 UFSP1Q6NVU6 142 aa8.67□□□□□ -1.02
HDAC4-207ENST00000461113 DNAH5Q8TE73 4624 aa8.67□□□□□ -1.02
HDAC4-207ENST00000461113 RPL36ALQ969Q0 106 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms