RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 NUDT11Q96G61 164 aa9.16□□□□□ -0.94
RAB11FIP3-207ENST00000461009 Q9H8V8 135 aa9.16□□□□□ -0.94
RAB11FIP3-207ENST00000461009 K7EN84 100 aa9.15□□□□□ -0.94
RAB11FIP3-207ENST00000461009 K7EQD1 137 aa9.15□□□□□ -0.94
RAB11FIP3-207ENST00000461009 SLC25A29Q8N8R3 303 aa9.15□□□□□ -0.94
RAB11FIP3-207ENST00000461009 FER1L6-AS1Q8NA97 138 aa9.15□□□□□ -0.94
RAB11FIP3-207ENST00000461009 TPPP3Q9BW30 176 aa9.15□□□□□ -0.94
RAB11FIP3-207ENST00000461009 JPT2Q9H910 190 aa9.15□□□□□ -0.94
RAB11FIP3-207ENST00000461009 GATCO43716 136 aaKnown RBP9.14□□□□□ -0.95
RAB11FIP3-207ENST00000461009 NXPH4O95158 308 aa9.14□□□□□ -0.95
RAB11FIP3-207ENST00000461009 CACNG7P62955 275 aa9.14□□□□□ -0.95
RAB11FIP3-207ENST00000461009 TMEM241Q24JQ0 296 aa9.14□□□□□ -0.95
RAB11FIP3-207ENST00000461009 FAM74A4Q5TZK3 123 aa9.14□□□□□ -0.95
RAB11FIP3-207ENST00000461009 OR10AG1Q8NH19 301 aa9.14□□□□□ -0.95
RAB11FIP3-207ENST00000461009 RNASE7Q9H1E1 156 aaKnown RBP9.14□□□□□ -0.95
RAB11FIP3-207ENST00000461009 RPP21Q9H633 154 aaKnown RBP9.14□□□□□ -0.95
RAB11FIP3-207ENST00000461009 MRPS16Q9Y3D3 137 aaKnown RBP9.14□□□□□ -0.95
RAB11FIP3-207ENST00000461009 A0A087WWL8 130 aa9.13□□□□□ -0.95
RAB11FIP3-207ENST00000461009 CRYGDP07320 174 aa9.13□□□□□ -0.95
RAB11FIP3-207ENST00000461009 IGLC6P0CF74 106 aa9.13□□□□□ -0.95
RAB11FIP3-207ENST00000461009 SMIM17P0DL12 118 aa9.13□□□□□ -0.95
RAB11FIP3-207ENST00000461009 GZMBP10144 247 aa9.13□□□□□ -0.95
RAB11FIP3-207ENST00000461009 ERVFC1-1P60608 527 aa9.13□□□□□ -0.95
RAB11FIP3-207ENST00000461009 SSTP61278 116 aa9.13□□□□□ -0.95
RAB11FIP3-207ENST00000461009 UFSP1Q6NVU6 142 aa9.13□□□□□ -0.95
RAB11FIP3-207ENST00000461009 WDR73Q6P4I2 378 aa9.13□□□□□ -0.95
RAB11FIP3-207ENST00000461009 LYPD5Q6UWN5 251 aa9.13□□□□□ -0.95
RAB11FIP3-207ENST00000461009 FAM231DQ6ZW35 169 aa9.13□□□□□ -0.95
RAB11FIP3-207ENST00000461009 UPK3BQ9BT76 320 aa9.13□□□□□ -0.95
RAB11FIP3-207ENST00000461009 SAMD10Q9BYL1 202 aa9.13□□□□□ -0.95
RAB11FIP3-207ENST00000461009 HECTD4Q9Y4D8 3996 aa9.12□□□□□ -0.95
RAB11FIP3-207ENST00000461009 MUC21A0A0G2JKD1 596 aa9.12□□□□□ -0.95
RAB11FIP3-207ENST00000461009 MUC21A0A140T8X8 626 aa9.12□□□□□ -0.95
RAB11FIP3-207ENST00000461009 A8MWL6 223 aa9.12□□□□□ -0.95
RAB11FIP3-207ENST00000461009 LOC100131303A0A0U1RQF7 123 aa9.11□□□□□ -0.95
RAB11FIP3-207ENST00000461009 BTF3P20290 206 aaKnown RBP9.11□□□□□ -0.95
RAB11FIP3-207ENST00000461009 RAB4BP61018 213 aa9.11□□□□□ -0.95
RAB11FIP3-207ENST00000461009 SRSF3P84103 164 aaKnown RBP9.11□□□□□ -0.95
RAB11FIP3-207ENST00000461009 LYZL1Q6UWQ5 148 aa9.11□□□□□ -0.95
RAB11FIP3-207ENST00000461009 LINC01551Q86U37 167 aa9.11□□□□□ -0.95
RAB11FIP3-207ENST00000461009 C15orf54Q8N8G6 183 aa9.11□□□□□ -0.95
RAB11FIP3-207ENST00000461009 AP1S3Q96PC3 154 aa9.11□□□□□ -0.95
RAB11FIP3-207ENST00000461009 NAT8Q9UHE5 227 aa9.11□□□□□ -0.95
RAB11FIP3-207ENST00000461009 C9JQL5 133 aa9.1□□□□□ -0.95
RAB11FIP3-207ENST00000461009 TRGC1P0CF51 173 aa9.1□□□□□ -0.95
RAB11FIP3-207ENST00000461009 CT83Q5H943 113 aa9.1□□□□□ -0.95
RAB11FIP3-207ENST00000461009 CLLU1Q5K131 121 aa9.1□□□□□ -0.95
RAB11FIP3-207ENST00000461009 Q6ZSN1 163 aa9.1□□□□□ -0.95
RAB11FIP3-207ENST00000461009 ATP6V0E2Q8NHE4 81 aa9.1□□□□□ -0.95
RAB11FIP3-207ENST00000461009 OSTCQ9NRP0 149 aa9.1□□□□□ -0.95
RAB11FIP3-207ENST00000461009 TRBV10-1A0A0K0K1A3 114 aa9.09□□□□□ -0.95
RAB11FIP3-207ENST00000461009 F5H697 171 aa9.09□□□□□ -0.95
RAB11FIP3-207ENST00000461009 TIRAPP58753 221 aa9.09□□□□□ -0.95
RAB11FIP3-207ENST00000461009 ZNF56Q15929 161 aa9.09□□□□□ -0.95
RAB11FIP3-207ENST00000461009 C14orf178Q8N769 122 aaPredicted RBP9.09□□□□□ -0.95
RAB11FIP3-207ENST00000461009 GAGE12JA6NER3 117 aa9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 C16orf90A8MZG2 172 aa9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 SIVA1O15304 175 aa9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 NTF3P20783 257 aa9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 CTRLP40313 264 aa9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 RPL23P62829 140 aaKnown RBP9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 RPL36AP83881 106 aaKnown RBP9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 TNP2Q05952 138 aa9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 GAGE1Q13065 139 aa9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 GAGE4Q13068 117 aa9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 GAGE5Q13069 117 aa9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 TWIST1Q15672 202 aa9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 ADIRFQ15847 76 aa9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 GAGE13Q4V321 117 aa9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 SMIM15Q7Z3B0 74 aa9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 RPL36ALQ969Q0 106 aaKnown RBP9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 BORCS7Q96B45 105 aa9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 GTSF1LQ9H1H1 148 aa9.08□□□□□ -0.96
RAB11FIP3-207ENST00000461009 TRAV9-2A0A087WT02 112 aa9.07□□□□□ -0.96
RAB11FIP3-207ENST00000461009 TRAV8-6A0A0B4J262 113 aa9.07□□□□□ -0.96
RAB11FIP3-207ENST00000461009 FAM231BA6NCW3 169 aa9.07□□□□□ -0.96
RAB11FIP3-207ENST00000461009 FOXA3P55318 350 aaPredicted RBP9.07□□□□□ -0.96
RAB11FIP3-207ENST00000461009 IFITM2Q01629 132 aa9.07□□□□□ -0.96
RAB11FIP3-207ENST00000461009 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.07□□□□□ -0.96
RAB11FIP3-207ENST00000461009 OR10G8Q8NGN5 311 aa9.07□□□□□ -0.96
RAB11FIP3-207ENST00000461009 ISOC2Q96AB3 205 aa9.07□□□□□ -0.96
RAB11FIP3-207ENST00000461009 CNFNQ9BYD5 112 aa9.07□□□□□ -0.96
RAB11FIP3-207ENST00000461009 GFRA4Q9GZZ7 299 aa9.07□□□□□ -0.96
RAB11FIP3-207ENST00000461009 TSKUQ8WUA8 353 aa9.06□□□□□ -0.96
RAB11FIP3-207ENST00000461009 DPH3P1Q9H4G8 78 aa9.06□□□□□ -0.96
RAB11FIP3-207ENST00000461009 MSRB1Q9NZV6 116 aa9.06□□□□□ -0.96
RAB11FIP3-207ENST00000461009 KIF25-AS1Q9Y6Z4 181 aa9.06□□□□□ -0.96
RAB11FIP3-207ENST00000461009 TRBV7-3A0A075B6L6 115 aa9.05□□□□□ -0.96
RAB11FIP3-207ENST00000461009 A0A087WWC5 75 aa9.05□□□□□ -0.96
RAB11FIP3-207ENST00000461009 H7C1H1 209 aa9.05□□□□□ -0.96
RAB11FIP3-207ENST00000461009 K7EP13 123 aa9.05□□□□□ -0.96
RAB11FIP3-207ENST00000461009 MGPP08493 103 aa9.05□□□□□ -0.96
RAB11FIP3-207ENST00000461009 EVI2AP22794 236 aa9.05□□□□□ -0.96
RAB11FIP3-207ENST00000461009 LELP1Q5T871 98 aa9.05□□□□□ -0.96
RAB11FIP3-207ENST00000461009 GTSF1Q8WW33 167 aa9.05□□□□□ -0.96
RAB11FIP3-207ENST00000461009 PGLYRP4Q96LB8 373 aa9.05□□□□□ -0.96
RAB11FIP3-207ENST00000461009 DNAH2Q9P225 4427 aa9.04□□□□□ -0.96
RAB11FIP3-207ENST00000461009 EREGO14944 169 aa9.04□□□□□ -0.96
RAB11FIP3-207ENST00000461009 OR10J3Q5JRS4 329 aa9.04□□□□□ -0.96
RAB11FIP3-207ENST00000461009 V9GYV3 84 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms