RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 SLC50A1Q9BRV3 221 aa8.16□□□□□ -1.1
APTX-209ENST00000460940 U3KQK5 164 aa8.16□□□□□ -1.1
APTX-209ENST00000460940 HLA-DRB4P13762 266 aa8.15□□□□□ -1.1
APTX-209ENST00000460940 RPL35AP18077 110 aaKnown RBP8.15□□□□□ -1.1
APTX-209ENST00000460940 TRPT1Q86TN4 253 aaKnown RBP8.15□□□□□ -1.1
APTX-209ENST00000460940 ZC2HC1AQ96GY0 325 aa8.15□□□□□ -1.1
APTX-209ENST00000460940 HLA-DRB4X5D2U9 266 aa8.15□□□□□ -1.1
APTX-209ENST00000460940 TENM3Q9P273 2699 aa8.15□□□□□ -1.11
APTX-209ENST00000460940 TRAV5A0A0B4J249 113 aa8.15□□□□□ -1.11
APTX-209ENST00000460940 KNCNA6PVL3 124 aa8.15□□□□□ -1.11
APTX-209ENST00000460940 RPL24P83731 157 aaKnown RBP8.15□□□□□ -1.11
APTX-209ENST00000460940 MORN3Q6PF18 240 aaPredicted RBP8.15□□□□□ -1.11
APTX-209ENST00000460940 BOD1L2Q8IYS8 172 aa8.15□□□□□ -1.11
APTX-209ENST00000460940 TP53TG1Q9Y2A0 90 aa8.15□□□□□ -1.11
APTX-209ENST00000460940 TRAV8-2A0A0B4J237 113 aa8.14□□□□□ -1.11
APTX-209ENST00000460940 TAS2R45P59539 299 aa8.14□□□□□ -1.11
APTX-209ENST00000460940 HBBP68871 147 aa8.14□□□□□ -1.11
APTX-209ENST00000460940 PDE6HQ13956 83 aa8.14□□□□□ -1.11
APTX-209ENST00000460940 NDFIP1Q9BT67 221 aa8.14□□□□□ -1.11
APTX-209ENST00000460940 SLC25A2Q9BXI2 301 aa8.14□□□□□ -1.11
APTX-209ENST00000460940 NBEAL2Q6ZNJ1 2754 aa8.14□□□□□ -1.11
APTX-209ENST00000460940 GGTLC3B5MD39 225 aa8.13□□□□□ -1.11
APTX-209ENST00000460940 H3BMM0 161 aa8.13□□□□□ -1.11
APTX-209ENST00000460940 K7EQM0 130 aa8.13□□□□□ -1.11
APTX-209ENST00000460940 MIR17HGQ75NE6 70 aa8.13□□□□□ -1.11
APTX-209ENST00000460940 FAM167A-AS1Q96KT0 104 aa8.13□□□□□ -1.11
APTX-209ENST00000460940 C20orf173Q96LM9 149 aa8.13□□□□□ -1.11
APTX-209ENST00000460940 SPANXB1Q9NS25 103 aaPredicted RBP8.13□□□□□ -1.11
APTX-209ENST00000460940 F8W1H4 67 aa8.13□□□□□ -1.11
APTX-209ENST00000460940 CA1P00915 261 aaPredicted RBP8.13□□□□□ -1.11
APTX-209ENST00000460940 CT83Q5H943 113 aa8.13□□□□□ -1.11
APTX-209ENST00000460940 GEMIN7Q9H840 131 aaKnown RBP8.13□□□□□ -1.11
APTX-209ENST00000460940 HUWE1Q7Z6Z7 4374 aaKnown RBP8.12□□□□□ -1.11
APTX-209ENST00000460940 TRBV19A0A075B6N1 114 aa8.12□□□□□ -1.11
APTX-209ENST00000460940 A0A0J9YX75 114 aa8.12□□□□□ -1.11
APTX-209ENST00000460940 RNF182Q8N6D2 247 aa8.12□□□□□ -1.11
APTX-209ENST00000460940 ZNF503Q96F45 646 aa8.12□□□□□ -1.11
APTX-209ENST00000460940 PAXXQ9BUH6 204 aa8.12□□□□□ -1.11
APTX-209ENST00000460940 MRPL16Q9NX20 251 aaKnown RBP8.12□□□□□ -1.11
APTX-209ENST00000460940 FBLL1A6NHQ2 334 aaKnown RBP8.11□□□□□ -1.11
APTX-209ENST00000460940 HIGD1CA8MV81 97 aa8.11□□□□□ -1.11
APTX-209ENST00000460940 DUSP14O95147 198 aaKnown RBP8.11□□□□□ -1.11
APTX-209ENST00000460940 PYYP10082 97 aa8.11□□□□□ -1.11
APTX-209ENST00000460940 DEFB135Q30KP9 77 aa8.11□□□□□ -1.11
APTX-209ENST00000460940 BLNKQ8WV28 456 aa8.11□□□□□ -1.11
APTX-209ENST00000460940 RNF183Q96D59 192 aa8.11□□□□□ -1.11
APTX-209ENST00000460940 VGLL1Q99990 258 aa8.11□□□□□ -1.11
APTX-209ENST00000460940 OVOL2Q9BRP0 275 aa8.11□□□□□ -1.11
APTX-209ENST00000460940 TPPP3Q9BW30 176 aa8.11□□□□□ -1.11
APTX-209ENST00000460940 C1QTNF4Q9BXJ3 329 aa8.11□□□□□ -1.11
APTX-209ENST00000460940 RETNQ9HD89 108 aa8.11□□□□□ -1.11
APTX-209ENST00000460940 A8MTW9 85 aa8.11□□□□□ -1.11
APTX-209ENST00000460940 SPRY2O43597 315 aa8.11□□□□□ -1.11
APTX-209ENST00000460940 SMIM13P0DJ93 91 aa8.11□□□□□ -1.11
APTX-209ENST00000460940 UBE2L3P68036 154 aaKnown RBP8.11□□□□□ -1.11
APTX-209ENST00000460940 IGFL4Q6B9Z1 124 aa8.11□□□□□ -1.11
APTX-209ENST00000460940 MRPL53Q96EL3 112 aaKnown RBP8.11□□□□□ -1.11
APTX-209ENST00000460940 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.1□□□□□ -1.11
APTX-209ENST00000460940 H3BTX0 84 aa8.1□□□□□ -1.11
APTX-209ENST00000460940 CAMPP49913 170 aa8.1□□□□□ -1.11
APTX-209ENST00000460940 FXYD5Q96DB9 178 aa8.1□□□□□ -1.11
APTX-209ENST00000460940 GFRA4Q9GZZ7 299 aa8.1□□□□□ -1.11
APTX-209ENST00000460940 AAMDCQ9H7C9 122 aa8.1□□□□□ -1.11
APTX-209ENST00000460940 F6UB75 175 aa8.09□□□□□ -1.11
APTX-209ENST00000460940 GIG44P09565 113 aaPredicted RBP8.09□□□□□ -1.11
APTX-209ENST00000460940 DEFB1P60022 68 aa8.09□□□□□ -1.11
APTX-209ENST00000460940 LGALS9BQ3B8N2 356 aa8.09□□□□□ -1.11
APTX-209ENST00000460940 LGALS9CQ6DKI2 356 aa8.09□□□□□ -1.11
APTX-209ENST00000460940 OR8A1Q8NGG7 326 aa8.09□□□□□ -1.11
APTX-209ENST00000460940 HIGD1BQ9P298 99 aa8.09□□□□□ -1.11
APTX-209ENST00000460940 CT45A10P0DMU9 189 aa8.09□□□□□ -1.12
APTX-209ENST00000460940 HLA-DMBP28068 263 aa8.09□□□□□ -1.12
APTX-209ENST00000460940 CSN1S1P47710 185 aa8.09□□□□□ -1.12
APTX-209ENST00000460940 C5orf47Q569G3 176 aa8.09□□□□□ -1.12
APTX-209ENST00000460940 LYPD1Q8N2G4 141 aa8.09□□□□□ -1.12
APTX-209ENST00000460940 GTSF1Q8WW33 167 aa8.09□□□□□ -1.12
APTX-209ENST00000460940 WWC2-AS2Q96NR7 200 aa8.09□□□□□ -1.12
APTX-209ENST00000460940 NAA38Q9BRA0 125 aaKnown RBP8.09□□□□□ -1.12
APTX-209ENST00000460940 ZNF492Q9P255 531 aa8.09□□□□□ -1.12
APTX-209ENST00000460940 AGRNO00468 2067 aa8.08□□□□□ -1.12
APTX-209ENST00000460940 A8MWL6 223 aa8.08□□□□□ -1.12
APTX-209ENST00000460940 PEX7O00628 323 aa8.08□□□□□ -1.12
APTX-209ENST00000460940 IGKV3-20P01619 116 aa8.08□□□□□ -1.12
APTX-209ENST00000460940 GATD1Q8NB37 220 aa8.08□□□□□ -1.12
APTX-209ENST00000460940 OR10J6PQ8NGY7 276 aa8.08□□□□□ -1.12
APTX-209ENST00000460940 RAB37Q96AX2 223 aa8.08□□□□□ -1.12
APTX-209ENST00000460940 RPP21Q9H633 154 aaKnown RBP8.08□□□□□ -1.12
APTX-209ENST00000460940 FOXA3P55318 350 aaPredicted RBP8.07□□□□□ -1.12
APTX-209ENST00000460940 AMTNQ6UX39 209 aa8.07□□□□□ -1.12
APTX-209ENST00000460940 PSG8Q9UQ74 426 aa8.07□□□□□ -1.12
APTX-209ENST00000460940 CSNK1G2-AS1Q8NCQ2 148 aa8.06□□□□□ -1.12
APTX-209ENST00000460940 PHLDA1Q8WV24 401 aaPredicted RBP8.06□□□□□ -1.12
APTX-209ENST00000460940 EDA2RQ9HAV5 297 aa8.06□□□□□ -1.12
APTX-209ENST00000460940 SS18L2Q9UHA2 77 aa8.06□□□□□ -1.12
APTX-209ENST00000460940 E9PLD3 99 aa8.06□□□□□ -1.12
APTX-209ENST00000460940 SNAI2O43623 268 aa8.06□□□□□ -1.12
APTX-209ENST00000460940 RPL32P62910 135 aaKnown RBP8.06□□□□□ -1.12
APTX-209ENST00000460940 EXOC3-AS1Q8N2X6 119 aa8.06□□□□□ -1.12
APTX-209ENST00000460940 ATP6V0E2Q8NHE4 81 aa8.06□□□□□ -1.12
APTX-209ENST00000460940 AP5S1Q9NUS5 200 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms