RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 A0A087WWL8 130 aa11.09□□□□□ -0.63
CD28-203ENST00000458610 CRYGDP07320 174 aa11.09□□□□□ -0.63
CD28-203ENST00000458610 SMIM17P0DL12 118 aa11.09□□□□□ -0.63
CD28-203ENST00000458610 CEBPGP53567 150 aa11.09□□□□□ -0.63
CD28-203ENST00000458610 CACNG7P62955 275 aa11.09□□□□□ -0.63
CD28-203ENST00000458610 OR10AG1Q8NH19 301 aa11.09□□□□□ -0.63
CD28-203ENST00000458610 TRAV8-6A0A0B4J262 113 aa11.08□□□□□ -0.64
CD28-203ENST00000458610 PRSS29PA6NIE9 313 aa11.08□□□□□ -0.64
CD28-203ENST00000458610 RTL8CO15255 209 aa11.08□□□□□ -0.64
CD28-203ENST00000458610 NUDT10Q8NFP7 164 aa11.08□□□□□ -0.64
CD28-203ENST00000458610 NUDT11Q96G61 164 aa11.08□□□□□ -0.64
CD28-203ENST00000458610 LY96Q9Y6Y9 160 aa11.08□□□□□ -0.64
CD28-203ENST00000458610 VPS13DQ5THJ4 4388 aa11.07□□□□□ -0.64
CD28-203ENST00000458610 TRBV10-1A0A0K0K1A3 114 aa11.07□□□□□ -0.64
CD28-203ENST00000458610 EVI2AP22794 236 aa11.07□□□□□ -0.64
CD28-203ENST00000458610 RAB4BP61018 213 aa11.07□□□□□ -0.64
CD28-203ENST00000458610 Q6ZSN1 163 aa11.07□□□□□ -0.64
CD28-203ENST00000458610 TPPP3Q9BW30 176 aa11.07□□□□□ -0.64
CD28-203ENST00000458610 GTSF1LQ9H1H1 148 aa11.07□□□□□ -0.64
CD28-203ENST00000458610 GAGE12JA6NER3 117 aa11.06□□□□□ -0.64
CD28-203ENST00000458610 ZNF727A8MUV8 499 aa11.06□□□□□ -0.64
CD28-203ENST00000458610 IGLC6P0CF74 106 aa11.06□□□□□ -0.64
CD28-203ENST00000458610 GAGE1Q13065 139 aa11.06□□□□□ -0.64
CD28-203ENST00000458610 GAGE4Q13068 117 aa11.06□□□□□ -0.64
CD28-203ENST00000458610 GAGE5Q13069 117 aa11.06□□□□□ -0.64
CD28-203ENST00000458610 PEA15Q15121 130 aa11.06□□□□□ -0.64
CD28-203ENST00000458610 GAGE13Q4V321 117 aa11.06□□□□□ -0.64
CD28-203ENST00000458610 WDR73Q6P4I2 378 aa11.06□□□□□ -0.64
CD28-203ENST00000458610 AP1S3Q96PC3 154 aa11.06□□□□□ -0.64
CD28-203ENST00000458610 SMIM7Q9BQ49 75 aa11.06□□□□□ -0.64
CD28-203ENST00000458610 SMDT1Q9H4I9 107 aa11.06□□□□□ -0.64
CD28-203ENST00000458610 RPP21Q9H633 154 aaKnown RBP11.06□□□□□ -0.64
CD28-203ENST00000458610 A0A087WWC5 75 aa11.05□□□□□ -0.64
CD28-203ENST00000458610 MUC21A0A0G2JKD1 596 aa11.05□□□□□ -0.64
CD28-203ENST00000458610 MUC21A0A140T8X8 626 aa11.05□□□□□ -0.64
CD28-203ENST00000458610 F5H697 171 aa11.05□□□□□ -0.64
CD28-203ENST00000458610 SRP19P09132 144 aaKnown RBP11.05□□□□□ -0.64
CD28-203ENST00000458610 GZMBP10144 247 aa11.05□□□□□ -0.64
CD28-203ENST00000458610 SSTP61278 116 aa11.05□□□□□ -0.64
CD28-203ENST00000458610 RPL36AP83881 106 aaKnown RBP11.05□□□□□ -0.64
CD28-203ENST00000458610 IFITM2Q01629 132 aa11.05□□□□□ -0.64
CD28-203ENST00000458610 FAM74A3Q4VXF1 159 aa11.05□□□□□ -0.64
CD28-203ENST00000458610 LELP1Q5T871 98 aa11.05□□□□□ -0.64
CD28-203ENST00000458610 FAM231DQ6ZW35 169 aa11.05□□□□□ -0.64
CD28-203ENST00000458610 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.05□□□□□ -0.64
CD28-203ENST00000458610 RPL36ALQ969Q0 106 aaKnown RBP11.05□□□□□ -0.64
CD28-203ENST00000458610 K7EN84 100 aa11.04□□□□□ -0.64
CD28-203ENST00000458610 GATCO43716 136 aaKnown RBP11.04□□□□□ -0.64
CD28-203ENST00000458610 DNAH10OSP0CZ25 163 aa11.04□□□□□ -0.64
CD28-203ENST00000458610 RAB14P61106 215 aa11.04□□□□□ -0.64
CD28-203ENST00000458610 ZNF56Q15929 161 aa11.04□□□□□ -0.64
CD28-203ENST00000458610 OR10J3Q5JRS4 329 aa11.04□□□□□ -0.64
CD28-203ENST00000458610 C10orf126Q8N4M7 172 aa11.04□□□□□ -0.64
CD28-203ENST00000458610 C14orf178Q8N769 122 aaPredicted RBP11.04□□□□□ -0.64
CD28-203ENST00000458610 IGHV3-38A0A0C4DH36 116 aa11.03□□□□□ -0.64
CD28-203ENST00000458610 ATP6V1G1O75348 118 aa11.03□□□□□ -0.64
CD28-203ENST00000458610 TRGC1P0CF51 173 aa11.03□□□□□ -0.64
CD28-203ENST00000458610 ERVFC1-1P60608 527 aa11.03□□□□□ -0.64
CD28-203ENST00000458610 LYZL1Q6UWQ5 148 aa11.03□□□□□ -0.64
CD28-203ENST00000458610 NFE4Q86UQ8 179 aa11.03□□□□□ -0.64
CD28-203ENST00000458610 RNASE7Q9H1E1 156 aaKnown RBP11.03□□□□□ -0.64
CD28-203ENST00000458610 A8MWL6 223 aa11.02□□□□□ -0.65
CD28-203ENST00000458610 WFDC10BQ8IUB3 73 aa11.02□□□□□ -0.65
CD28-203ENST00000458610 TRBV7-3A0A075B6L6 115 aa11.01□□□□□ -0.65
CD28-203ENST00000458610 H7C1H1 209 aa11.01□□□□□ -0.65
CD28-203ENST00000458610 LINC00694P0DN24 101 aa11.01□□□□□ -0.65
CD28-203ENST00000458610 TMEM241Q24JQ0 296 aa11.01□□□□□ -0.65
CD28-203ENST00000458610 CT83Q5H943 113 aa11.01□□□□□ -0.65
CD28-203ENST00000458610 KMT2AQ03164 3969 aa11.01□□□□□ -0.65
CD28-203ENST00000458610 NTF3P20783 257 aa11□□□□□ -0.65
CD28-203ENST00000458610 CTRLP40313 264 aa11□□□□□ -0.65
CD28-203ENST00000458610 LINC01556Q5JQF7 62 aa11□□□□□ -0.65
CD28-203ENST00000458610 SMIM15Q7Z3B0 74 aa11□□□□□ -0.65
CD28-203ENST00000458610 LINC01551Q86U37 167 aa11□□□□□ -0.65
CD28-203ENST00000458610 C15orf54Q8N8G6 183 aa11□□□□□ -0.65
CD28-203ENST00000458610 OR10G8Q8NGN5 311 aa11□□□□□ -0.65
CD28-203ENST00000458610 KRTAP1-5Q9BYS1 174 aa11□□□□□ -0.65
CD28-203ENST00000458610 TWIST1Q15672 202 aa10.99□□□□□ -0.65
CD28-203ENST00000458610 BORCS7Q96B45 105 aa10.99□□□□□ -0.65
CD28-203ENST00000458610 CNFNQ9BYD5 112 aa10.99□□□□□ -0.65
CD28-203ENST00000458610 OSTCQ9NRP0 149 aa10.99□□□□□ -0.65
CD28-203ENST00000458610 KIF25-AS1Q9Y6Z4 181 aa10.99□□□□□ -0.65
CD28-203ENST00000458610 MGPP08493 103 aa10.98□□□□□ -0.65
CD28-203ENST00000458610 LINC00315P59091 139 aa10.98□□□□□ -0.65
CD28-203ENST00000458610 UBE2D3P61077 147 aa10.98□□□□□ -0.65
CD28-203ENST00000458610 UBE2D2P62837 147 aa10.98□□□□□ -0.65
CD28-203ENST00000458610 TMEM97Q5BJF2 176 aa10.98□□□□□ -0.65
CD28-203ENST00000458610 DNAJC30Q96LL9 226 aa10.98□□□□□ -0.65
CD28-203ENST00000458610 DPH3P1Q9H4G8 78 aa10.98□□□□□ -0.65
CD28-203ENST00000458610 MSRB1Q9NZV6 116 aa10.98□□□□□ -0.65
CD28-203ENST00000458610 Q9UF83 564 aa10.98□□□□□ -0.65
CD28-203ENST00000458610 DNAH6Q9C0G6 4158 aa10.97□□□□□ -0.65
CD28-203ENST00000458610 A0A1B0GVY2 172 aa10.97□□□□□ -0.65
CD28-203ENST00000458610 FAM231BA6NCW3 169 aa10.97□□□□□ -0.65
CD28-203ENST00000458610 FOXA3P55318 350 aaPredicted RBP10.97□□□□□ -0.65
CD28-203ENST00000458610 GFRA4Q9GZZ7 299 aa10.97□□□□□ -0.65
CD28-203ENST00000458610 NAT8Q9UHE5 227 aa10.97□□□□□ -0.65
CD28-203ENST00000458610 TNFRSF18Q9Y5U5 241 aa10.97□□□□□ -0.65
CD28-203ENST00000458610 TNP2Q05952 138 aa10.96□□□□□ -0.65
CD28-203ENST00000458610 KCNIP4Q6PIL6 250 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms