RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 HERC2O95714 4834 aa11□□□□□ -0.65
CPSF6-203ENST00000456847 UFSP1Q6NVU6 142 aa10.99□□□□□ -0.65
CPSF6-203ENST00000456847 C14orf178Q8N769 122 aaPredicted RBP10.99□□□□□ -0.65
CPSF6-203ENST00000456847 SFRP2Q96HF1 295 aa10.99□□□□□ -0.65
CPSF6-203ENST00000456847 DERL1Q9BUN8 251 aa10.99□□□□□ -0.65
CPSF6-203ENST00000456847 MLST8Q9BVC4 326 aa10.99□□□□□ -0.65
CPSF6-203ENST00000456847 BOLA1Q9Y3E2 137 aa10.99□□□□□ -0.65
CPSF6-203ENST00000456847 CXCL1P09341 107 aa10.98□□□□□ -0.65
CPSF6-203ENST00000456847 CENPWQ5EE01 88 aa10.98□□□□□ -0.65
CPSF6-203ENST00000456847 LINC01556Q5JQF7 62 aa10.98□□□□□ -0.65
CPSF6-203ENST00000456847 KIAA1109Q2LD37 5005 aa10.98□□□□□ -0.65
CPSF6-203ENST00000456847 IGHV3-30P01768 117 aa10.97□□□□□ -0.65
CPSF6-203ENST00000456847 IGHV3-33P01772 117 aa10.97□□□□□ -0.65
CPSF6-203ENST00000456847 IGHV3-30-3P0DP02 117 aa10.97□□□□□ -0.65
CPSF6-203ENST00000456847 IGHV3-30-5P0DP03 117 aa10.97□□□□□ -0.65
CPSF6-203ENST00000456847 MEF2BQ02080 365 aaPredicted RBP10.97□□□□□ -0.65
CPSF6-203ENST00000456847 KRTAP10-2P60368 255 aa10.97□□□□□ -0.65
CPSF6-203ENST00000456847 C9orf62Q8N4C0 152 aa10.97□□□□□ -0.65
CPSF6-203ENST00000456847 PDE6DO43924 150 aa10.96□□□□□ -0.65
CPSF6-203ENST00000456847 LINC00694P0DN24 101 aa10.96□□□□□ -0.65
CPSF6-203ENST00000456847 OR10AG1Q8NH19 301 aa10.96□□□□□ -0.65
CPSF6-203ENST00000456847 BCL2P10415 239 aa10.96□□□□□ -0.66
CPSF6-203ENST00000456847 GNG4P50150 75 aa10.96□□□□□ -0.66
CPSF6-203ENST00000456847 SPANXN1Q5VSR9 72 aa10.96□□□□□ -0.66
CPSF6-203ENST00000456847 DAZAP1Q96EP5 407 aaKnown RBP10.96□□□□□ -0.66
CPSF6-203ENST00000456847 MED9Q9NWA0 146 aa10.96□□□□□ -0.66
CPSF6-203ENST00000456847 PSCAO43653 123 aa10.95□□□□□ -0.66
CPSF6-203ENST00000456847 ZNF56Q15929 161 aa10.95□□□□□ -0.66
CPSF6-203ENST00000456847 Q9HAA7 133 aa10.95□□□□□ -0.66
CPSF6-203ENST00000456847 Q9UF83 564 aa10.95□□□□□ -0.66
CPSF6-203ENST00000456847 MUC21A0A0G2JKD1 596 aa10.94□□□□□ -0.66
CPSF6-203ENST00000456847 MUC21A0A140T8X8 626 aa10.94□□□□□ -0.66
CPSF6-203ENST00000456847 RAB19A4D1S5 217 aa10.94□□□□□ -0.66
CPSF6-203ENST00000456847 SSTP61278 116 aa10.94□□□□□ -0.66
CPSF6-203ENST00000456847 VAX2Q9UIW0 290 aa10.94□□□□□ -0.66
CPSF6-203ENST00000456847 SNAI2O43623 268 aa10.94□□□□□ -0.66
CPSF6-203ENST00000456847 A0A087WWC5 75 aa10.93□□□□□ -0.66
CPSF6-203ENST00000456847 IBA57-AS1B1ANH7 110 aa10.93□□□□□ -0.66
CPSF6-203ENST00000456847 OR5AL1P0C617 328 aa10.93□□□□□ -0.66
CPSF6-203ENST00000456847 RPL36AP83881 106 aaKnown RBP10.93□□□□□ -0.66
CPSF6-203ENST00000456847 RPL36ALQ969Q0 106 aaKnown RBP10.93□□□□□ -0.66
CPSF6-203ENST00000456847 TPPP3Q9BW30 176 aa10.93□□□□□ -0.66
CPSF6-203ENST00000456847 A0A087WTM6 91 aa10.92□□□□□ -0.66
CPSF6-203ENST00000456847 TAGLN2P37802 199 aaKnown RBP10.92□□□□□ -0.66
CPSF6-203ENST00000456847 ALKAL2Q6UX46 152 aa10.92□□□□□ -0.66
CPSF6-203ENST00000456847 OR2D3Q8NGH3 330 aa10.92□□□□□ -0.66
CPSF6-203ENST00000456847 SMIM12Q96EX1 92 aa10.92□□□□□ -0.66
CPSF6-203ENST00000456847 TRBV10-1A0A0K0K1A3 114 aa10.92□□□□□ -0.66
CPSF6-203ENST00000456847 IGLV2-8P01709 118 aa10.92□□□□□ -0.66
CPSF6-203ENST00000456847 RPS20P60866 119 aaKnown RBP10.92□□□□□ -0.66
CPSF6-203ENST00000456847 SSBP4Q9BWG4 385 aaPredicted RBP10.92□□□□□ -0.66
CPSF6-203ENST00000456847 CDK2AP2O75956 126 aa10.91□□□□□ -0.66
CPSF6-203ENST00000456847 SMIM17P0DL12 118 aa10.91□□□□□ -0.66
CPSF6-203ENST00000456847 GZMBP10144 247 aa10.91□□□□□ -0.66
CPSF6-203ENST00000456847 FUSP35637 526 aaKnown RBP eCLIP10.91□□□□□ -0.663e-8■■■■□ 26.2
CPSF6-203ENST00000456847 RAB4BP61018 213 aa10.91□□□□□ -0.66
CPSF6-203ENST00000456847 BIN3Q9NQY0 253 aa10.91□□□□□ -0.66
CPSF6-203ENST00000456847 F5H697 171 aa10.9□□□□□ -0.66
CPSF6-203ENST00000456847 P01737 135 aa10.9□□□□□ -0.66
CPSF6-203ENST00000456847 Q8N3U1 123 aa10.9□□□□□ -0.66
CPSF6-203ENST00000456847 FER1L6-AS1Q8NA97 138 aa10.9□□□□□ -0.66
CPSF6-203ENST00000456847 AP1S3Q96PC3 154 aa10.9□□□□□ -0.66
CPSF6-203ENST00000456847 PGPEP1Q9NXJ5 209 aa10.9□□□□□ -0.66
CPSF6-203ENST00000456847 URGCP-MRPS24S4R325 110 aa10.9□□□□□ -0.66
CPSF6-203ENST00000456847 BLOC1S1P78537 153 aa10.9□□□□□ -0.67
CPSF6-203ENST00000456847 TRBV7-3A0A075B6L6 115 aa10.89□□□□□ -0.67
CPSF6-203ENST00000456847 XKRY2A2RUG3 117 aa10.89□□□□□ -0.67
CPSF6-203ENST00000456847 C19orf71A6NCJ1 209 aa10.89□□□□□ -0.67
CPSF6-203ENST00000456847 RBFOX3A6NFN3 312 aa10.89□□□□□ -0.67
CPSF6-203ENST00000456847 LAGE3Q14657 143 aa10.89□□□□□ -0.67
CPSF6-203ENST00000456847 CDPF1Q6NVV7 123 aa10.89□□□□□ -0.67
CPSF6-203ENST00000456847 TRBV20OR9-2A0A075B6H5 130 aa10.88□□□□□ -0.67
CPSF6-203ENST00000456847 UBE2D3P61077 147 aa10.88□□□□□ -0.67
CPSF6-203ENST00000456847 UBE2D2P62837 147 aa10.88□□□□□ -0.67
CPSF6-203ENST00000456847 MGPP08493 103 aa10.87□□□□□ -0.67
CPSF6-203ENST00000456847 IGLC6P0CF74 106 aa10.87□□□□□ -0.67
CPSF6-203ENST00000456847 NKX2-5P52952 324 aaPredicted RBP10.87□□□□□ -0.67
CPSF6-203ENST00000456847 TOR2AQ5JU69 321 aa10.87□□□□□ -0.67
CPSF6-203ENST00000456847 KCNIP4Q6PIL6 250 aa10.87□□□□□ -0.67
CPSF6-203ENST00000456847 DAZ4Q86SG3 579 aaKnown RBP10.87□□□□□ -0.67
CPSF6-203ENST00000456847 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.87□□□□□ -0.67
CPSF6-203ENST00000456847 NEXN-AS1Q8NBZ9 246 aa10.87□□□□□ -0.67
CPSF6-203ENST00000456847 DAZ3Q9NR90 486 aaKnown RBP10.87□□□□□ -0.67
CPSF6-203ENST00000456847 CACNG7P62955 275 aa10.86□□□□□ -0.67
CPSF6-203ENST00000456847 MAPKAPK5-AS1Q8N8E1 139 aa10.86□□□□□ -0.67
CPSF6-203ENST00000456847 OR10G8Q8NGN5 311 aa10.86□□□□□ -0.67
CPSF6-203ENST00000456847 TM2D2Q9BX73 214 aa10.86□□□□□ -0.67
CPSF6-203ENST00000456847 LRP1BQ9NZR2 4599 aa10.86□□□□□ -0.67
CPSF6-203ENST00000456847 A0A087WX48 190 aa10.85□□□□□ -0.67
CPSF6-203ENST00000456847 TRAV8-3A0A0A6YYJ7 113 aa10.85□□□□□ -0.67
CPSF6-203ENST00000456847 A0A1B0GVG6 124 aa10.85□□□□□ -0.67
CPSF6-203ENST00000456847 NIT1Q86X76 327 aa10.85□□□□□ -0.67
CPSF6-203ENST00000456847 RYR1P21817 5038 aa10.84□□□□□ -0.67
CPSF6-203ENST00000456847 F2Z2F3 143 aa10.84□□□□□ -0.67
CPSF6-203ENST00000456847 CEBPGP53567 150 aa10.84□□□□□ -0.67
CPSF6-203ENST00000456847 NUDT10Q8NFP7 164 aa10.84□□□□□ -0.67
CPSF6-203ENST00000456847 NUDT11Q96G61 164 aa10.84□□□□□ -0.67
CPSF6-203ENST00000456847 KIF25-AS1Q9Y6Z4 181 aa10.84□□□□□ -0.67
CPSF6-203ENST00000456847 LRCOL1A6NCL2 159 aa10.83□□□□□ -0.68
CPSF6-203ENST00000456847 LYZL1Q6UWQ5 148 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms