RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 C16orf97H3BN30 126 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 NDUFA4O00483 81 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 CDK2AP2O75956 126 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 PLA2G5P39877 138 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 ENHOQ6UWT2 76 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 CLEC19AQ6UXS0 136 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 PATE2Q6UY27 113 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 COX7B2Q8TF08 81 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 IGKV1D-17A0A075B6S4 117 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 BUB1B-PAK6H3BSN5 160 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 FRMD6-AS1P0C7T7 363 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 ZNF883P0CG24 379 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 C17orf58Q2M2W7 97 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 ZNF491Q8N8L2 437 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 SPTSSBQ8NFR3 76 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 RNF185Q96GF1 192 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 PLA2G2FQ9BZM2 168 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 LRRK2Q5S007 2527 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 PHF3Q92576 2039 aaKnown RBP1.69□□□□□ -2.14
USP53-202ENST00000450251 USP24Q9UPU5 2620 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 IGHV3-72A0A0B4J1Y9 119 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 EFNA2O43921 213 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 IGHV3-48P01763 117 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 IGHV1-2P23083 117 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 Q6ZQT7 251 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 SLC22A18ASQ8N1D0 253 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 C20orf203Q8NBC4 194 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 ZNF837Q96EG3 531 aaPredicted RBP1.69□□□□□ -2.14
USP53-202ENST00000450251 DCTN5Q9BTE1 182 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 ZNF71Q9NQZ8 489 aaPredicted RBP1.69□□□□□ -2.14
USP53-202ENST00000450251 KLK5Q9Y337 293 aaPredicted RBP1.69□□□□□ -2.14
USP53-202ENST00000450251 POLR2AP24928 1970 aaKnown RBP1.69□□□□□ -2.14
USP53-202ENST00000450251 C5orf63A6NC05 138 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 LECT2O14960 151 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 ZNF22P17026 224 aaPredicted RBP1.69□□□□□ -2.14
USP53-202ENST00000450251 WT1P19544 449 aaPredicted RBP1.69□□□□□ -2.14
USP53-202ENST00000450251 WT1-ASQ06250 92 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 KLHL30-AS1Q8NEE0 82 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 CYP4F30PQ9H0H9 118 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 ZNF462Q96JM2 2506 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 A6NED7 52 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 I3L2K1 104 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 AVPP01185 164 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 B3GALT5-AS1P59052 145 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 CFHR1Q03591 330 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 LINC00308Q8TCZ7 52 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 TTTY13Q9BZ97 58 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 DKK4Q9UBT3 224 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 A0A1B0GW54 56 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 NHLRC4P0CG21 123 aaPredicted RBP1.68□□□□□ -2.14
USP53-202ENST00000450251 LOXP28300 417 aaPredicted RBP1.68□□□□□ -2.14
USP53-202ENST00000450251 HIGD2BQ4VC39 106 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 KTN1-AS1Q86SY8 53 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 CPAMD8Q8IZJ3 1885 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 IBA57-AS1B1ANH7 110 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 CHKB-CPT1BH3BT56 60 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 WISP1O95388 367 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 GATA1P15976 413 aaPredicted RBP1.68□□□□□ -2.14
USP53-202ENST00000450251 GNLYP22749 145 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 SAA4P35542 130 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 SMCPP49901 116 aaPredicted RBP1.68□□□□□ -2.14
USP53-202ENST00000450251 SPINK14Q6IE38 97 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 C1orf158Q8N1D5 194 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 NPBQ8NG41 125 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 MDFIQ99750 246 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 LINC00574Q9H8X3 128 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 NUMA1Q14980 2115 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 ABCA2Q9BZC7 2435 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 IGKV3D-20A0A0C4DH25 116 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 IGHV1-18A0A0C4DH31 117 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 ZNF576Q9H609 170 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 SIT1Q9Y3P8 196 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 COL4A2P08572 1712 aa1.68□□□□□ -2.14
USP53-202ENST00000450251 A0A087WWL8 130 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 BPY2O14599 106 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 IGKV3-15P01624 115 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 IGKV1-16P04430 117 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 CFHR3Q02985 330 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 RSPO1Q2MKA7 263 aaPredicted RBP1.67□□□□□ -2.14
USP53-202ENST00000450251 MDC1Q14676 2089 aaKnown RBP1.67□□□□□ -2.14
USP53-202ENST00000450251 A0A0J9YXV3 536 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 H3BPC8 53 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 CCL21O00585 134 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 IGHV1-46P01743 117 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 C10orf55Q5SWW7 151 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 Q6ZVQ6 151 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 DIRC1Q969H9 104 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 RPL39LQ96EH5 51 aaKnown RBP1.67□□□□□ -2.14
USP53-202ENST00000450251 RITA1Q96K30 269 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 SPTAN1Q13813 2472 aaKnown RBP1.67□□□□□ -2.14
USP53-202ENST00000450251 IGKV1D-37A0A075B6S9 117 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 IGHV4OR15-8A0A075B7B6 117 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 A0A087WW49 117 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 TMEM178BH3BS89 294 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 IGLV2-11P01706 119 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 C17orf82Q86X59 251 aaPredicted RBP1.67□□□□□ -2.14
USP53-202ENST00000450251 Q8N7P7 452 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 DCANP1Q8TF63 244 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 C1orf159Q96HA4 380 aa1.67□□□□□ -2.14
USP53-202ENST00000450251 PSMG3-AS1Q96PY0 264 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms