RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 DLX4Q92988 240 aaPredicted RBP12.59□□□□□ -0.39
SNHG17-207ENST00000449469 ABCA2Q9BZC7 2435 aa12.59□□□□□ -0.39
SNHG17-207ENST00000449469 AGRNO00468 2067 aa12.59□□□□□ -0.39
SNHG17-207ENST00000449469 TRAV12-3A0A0B4J271 114 aa12.58□□□□□ -0.4
SNHG17-207ENST00000449469 A0A0J9YX75 114 aa12.58□□□□□ -0.4
SNHG17-207ENST00000449469 CD300EQ496F6 205 aaPredicted RBP12.58□□□□□ -0.4
SNHG17-207ENST00000449469 TRPT1Q86TN4 253 aaKnown RBP12.58□□□□□ -0.4
SNHG17-207ENST00000449469 IGHV4-30-2A0A087WSY4 118 aa12.58□□□□□ -0.4
SNHG17-207ENST00000449469 NFE4Q86UQ8 179 aa12.58□□□□□ -0.4
SNHG17-207ENST00000449469 A0A0J9YY99 117 aa12.57□□□□□ -0.4
SNHG17-207ENST00000449469 Q6ZS46 218 aa12.57□□□□□ -0.4
SNHG17-207ENST00000449469 IGF2RP11717 2491 aa12.57□□□□□ -0.4
SNHG17-207ENST00000449469 MUC4Q99102 2169 aa12.57□□□□□ -0.4
SNHG17-207ENST00000449469 TMEM238C9JI98 176 aa12.56□□□□□ -0.4
SNHG17-207ENST00000449469 A0A087WWL8 130 aa12.56□□□□□ -0.4
SNHG17-207ENST00000449469 K7EQG2 157 aa12.56□□□□□ -0.4
SNHG17-207ENST00000449469 SRD5A1P18405 259 aa12.56□□□□□ -0.4
SNHG17-207ENST00000449469 PLEKHB2Q96CS7 222 aa12.56□□□□□ -0.4
SNHG17-207ENST00000449469 SIGMAR1Q99720 223 aa12.56□□□□□ -0.4
SNHG17-207ENST00000449469 SPATA25Q9BR10 227 aa12.56□□□□□ -0.4
SNHG17-207ENST00000449469 CSMD1Q96PZ7 3565 aa12.56□□□□□ -0.4
SNHG17-207ENST00000449469 COL6A6A6NMZ7 2263 aa12.55□□□□□ -0.4
SNHG17-207ENST00000449469 IGHV1OR15-1A0A075B7D0 117 aa12.55□□□□□ -0.4
SNHG17-207ENST00000449469 M0QY20 66 aa12.55□□□□□ -0.4
SNHG17-207ENST00000449469 ZNF256Q9Y2P7 627 aaPredicted RBP12.55□□□□□ -0.4
SNHG17-207ENST00000449469 TRGV11A0A075B6L2 103 aa12.55□□□□□ -0.4
SNHG17-207ENST00000449469 UBE2D3P61077 147 aa12.55□□□□□ -0.4
SNHG17-207ENST00000449469 UBE2D2P62837 147 aa12.55□□□□□ -0.4
SNHG17-207ENST00000449469 RELNP78509 3460 aa12.55□□□□□ -0.4
SNHG17-207ENST00000449469 AMTNQ6UX39 209 aa12.55□□□□□ -0.4
SNHG17-207ENST00000449469 SLC25A29Q8N8R3 303 aa12.55□□□□□ -0.4
SNHG17-207ENST00000449469 JPT2Q9H910 190 aa12.55□□□□□ -0.4
SNHG17-207ENST00000449469 EDA2RQ9HAV5 297 aa12.55□□□□□ -0.4
SNHG17-207ENST00000449469 TRBV20-1A0A075B6N2 111 aa12.54□□□□□ -0.4
SNHG17-207ENST00000449469 RPL39P62891 51 aaKnown RBP12.54□□□□□ -0.4
SNHG17-207ENST00000449469 ZNF56Q15929 161 aa12.54□□□□□ -0.4
SNHG17-207ENST00000449469 ETDBQ3ZM63 59 aa12.54□□□□□ -0.4
SNHG17-207ENST00000449469 ATRXP46100 2492 aa12.54□□□□□ -0.4
SNHG17-207ENST00000449469 GAGE12HA6NDE8 117 aa12.53□□□□□ -0.4
SNHG17-207ENST00000449469 ZNF688P0C7X2 276 aa12.53□□□□□ -0.4
SNHG17-207ENST00000449469 TMEM170BQ5T4T1 132 aa12.53□□□□□ -0.4
SNHG17-207ENST00000449469 TSPAN13O95857 204 aa12.53□□□□□ -0.4
SNHG17-207ENST00000449469 LGALS3P17931 250 aaKnown RBP12.53□□□□□ -0.4
SNHG17-207ENST00000449469 CFAP126Q5VTH2 177 aa12.53□□□□□ -0.4
SNHG17-207ENST00000449469 NDUFA11Q86Y39 141 aa12.53□□□□□ -0.4
SNHG17-207ENST00000449469 Q8N1Y9 231 aa12.53□□□□□ -0.4
SNHG17-207ENST00000449469 MDFICQ9P1T7 246 aa12.53□□□□□ -0.4
SNHG17-207ENST00000449469 J3QLI3 93 aa12.52□□□□□ -0.4
SNHG17-207ENST00000449469 J3QQQ9 107 aa12.52□□□□□ -0.4
SNHG17-207ENST00000449469 IGHV3-30P01768 117 aa12.52□□□□□ -0.4
SNHG17-207ENST00000449469 IGHV3-30-5P0DP03 117 aa12.52□□□□□ -0.4
SNHG17-207ENST00000449469 FAM74A4Q5TZK3 123 aa12.52□□□□□ -0.4
SNHG17-207ENST00000449469 KLHL30-AS1Q8NEE0 82 aa12.52□□□□□ -0.4
SNHG17-207ENST00000449469 I3L3M4 83 aa12.52□□□□□ -0.41
SNHG17-207ENST00000449469 SPAG8Q99932 426 aaPredicted RBP12.52□□□□□ -0.41
SNHG17-207ENST00000449469 C1QTNF4Q9BXJ3 329 aa12.52□□□□□ -0.41
SNHG17-207ENST00000449469 TSSC4Q9Y5U2 329 aaPredicted RBP12.52□□□□□ -0.41
SNHG17-207ENST00000449469 LEPROTO15243 131 aa12.51□□□□□ -0.41
SNHG17-207ENST00000449469 CRYBA4P53673 196 aa12.51□□□□□ -0.41
SNHG17-207ENST00000449469 ZNRF2Q8NHG8 242 aa12.51□□□□□ -0.41
SNHG17-207ENST00000449469 APOMO95445 188 aa12.5□□□□□ -0.41
SNHG17-207ENST00000449469 ELANEP08246 267 aa12.5□□□□□ -0.41
SNHG17-207ENST00000449469 EDN2P20800 178 aa12.5□□□□□ -0.41
SNHG17-207ENST00000449469 SH2D6Q7Z4S9 175 aa12.5□□□□□ -0.41
SNHG17-207ENST00000449469 C20orf203Q8NBC4 194 aa12.5□□□□□ -0.41
SNHG17-207ENST00000449469 AMELXQ99217 191 aa12.5□□□□□ -0.41
SNHG17-207ENST00000449469 VCX2Q9H322 139 aa12.5□□□□□ -0.41
SNHG17-207ENST00000449469 PIK3CD-AS1Q5SR53 167 aa12.49□□□□□ -0.41
SNHG17-207ENST00000449469 C10orf126Q8N4M7 172 aa12.49□□□□□ -0.41
SNHG17-207ENST00000449469 LINC01356Q8N9X3 169 aa12.49□□□□□ -0.41
SNHG17-207ENST00000449469 TMEM223A0PJW6 202 aa12.49□□□□□ -0.41
SNHG17-207ENST00000449469 AVPP01185 164 aa12.49□□□□□ -0.41
SNHG17-207ENST00000449469 TMEM95Q3KNT9 176 aa12.49□□□□□ -0.41
SNHG17-207ENST00000449469 LOC107984156A0A0G2JMH3 177 aa12.48□□□□□ -0.41
SNHG17-207ENST00000449469 AZU1P20160 251 aa12.48□□□□□ -0.41
SNHG17-207ENST00000449469 EMP1P54849 157 aa12.48□□□□□ -0.41
SNHG17-207ENST00000449469 TSPEAR-AS2P59090 65 aa12.48□□□□□ -0.41
SNHG17-207ENST00000449469 ARL17AQ8IVW1 177 aa12.48□□□□□ -0.41
SNHG17-207ENST00000449469 PYGO1Q9Y3Y4 419 aa12.48□□□□□ -0.41
SNHG17-207ENST00000449469 TRAV12-2A0A075B6T6 113 aa12.47□□□□□ -0.41
SNHG17-207ENST00000449469 IGHV4-59P01825 116 aa12.47□□□□□ -0.41
SNHG17-207ENST00000449469 DEFB112Q30KQ8 113 aa12.47□□□□□ -0.41
SNHG17-207ENST00000449469 FOXI1Q12951 378 aa12.47□□□□□ -0.41
SNHG17-207ENST00000449469 SPINK13Q1W4C9 94 aa12.47□□□□□ -0.41
SNHG17-207ENST00000449469 WFDC12Q8WWY7 111 aa12.47□□□□□ -0.41
SNHG17-207ENST00000449469 UBE2E2Q96LR5 201 aa12.47□□□□□ -0.41
SNHG17-207ENST00000449469 PRO1854Q9UHT4 67 aa12.47□□□□□ -0.41
SNHG17-207ENST00000449469 CFC1BP0CG36 223 aa12.46□□□□□ -0.41
SNHG17-207ENST00000449469 CFC1P0CG37 223 aa12.46□□□□□ -0.41
SNHG17-207ENST00000449469 PSMB2P49721 201 aa12.46□□□□□ -0.41
SNHG17-207ENST00000449469 TRAV2A0A0B4J234 112 aa12.46□□□□□ -0.42
SNHG17-207ENST00000449469 P0DMU3 169 aa12.46□□□□□ -0.42
SNHG17-207ENST00000449469 FAM231AP0DMU4 169 aa12.46□□□□□ -0.42
SNHG17-207ENST00000449469 FAM231CP0DMU5 169 aa12.46□□□□□ -0.42
SNHG17-207ENST00000449469 GTSF1LQ9H1H1 148 aa12.46□□□□□ -0.42
SNHG17-207ENST00000449469 A0A0B4J2C4 111 aa12.45□□□□□ -0.42
SNHG17-207ENST00000449469 A8MTW9 85 aa12.45□□□□□ -0.42
SNHG17-207ENST00000449469 M0QXV9 152 aa12.45□□□□□ -0.42
SNHG17-207ENST00000449469 RHODO00212 210 aa12.45□□□□□ -0.42
SNHG17-207ENST00000449469 SYNJ2BPP57105 145 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms