RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ZNRF2Q8NHG8 242 aa9.59□□□□□ -0.87
PDLIM2-213ENST00000448520 PGLYRP4Q96LB8 373 aa9.59□□□□□ -0.87
PDLIM2-213ENST00000448520 SCRT2Q9NQ03 307 aa9.59□□□□□ -0.87
PDLIM2-213ENST00000448520 IL36BQ9NZH7 164 aa9.59□□□□□ -0.87
PDLIM2-213ENST00000448520 A8MWL6 223 aa9.58□□□□□ -0.88
PDLIM2-213ENST00000448520 M0R381 172 aa9.58□□□□□ -0.88
PDLIM2-213ENST00000448520 SNAI2O43623 268 aa9.58□□□□□ -0.88
PDLIM2-213ENST00000448520 SPINK4O60575 86 aa9.58□□□□□ -0.88
PDLIM2-213ENST00000448520 DAZ2Q13117 558 aaKnown RBP9.58□□□□□ -0.88
PDLIM2-213ENST00000448520 C6orf223Q8N319 242 aa9.58□□□□□ -0.88
PDLIM2-213ENST00000448520 TSKUQ8WUA8 353 aa9.58□□□□□ -0.88
PDLIM2-213ENST00000448520 SSBP4Q9BWG4 385 aaPredicted RBP9.58□□□□□ -0.88
PDLIM2-213ENST00000448520 RPS10P5Q9NQ39 176 aa9.58□□□□□ -0.88
PDLIM2-213ENST00000448520 XKRY2A2RUG3 117 aa9.57□□□□□ -0.88
PDLIM2-213ENST00000448520 HIGD1CA8MV81 97 aa9.57□□□□□ -0.88
PDLIM2-213ENST00000448520 M0R2P5 195 aa9.57□□□□□ -0.88
PDLIM2-213ENST00000448520 CTRLP40313 264 aa9.57□□□□□ -0.88
PDLIM2-213ENST00000448520 TNP2Q05952 138 aa9.57□□□□□ -0.88
PDLIM2-213ENST00000448520 DMRTA1Q5VZB9 504 aa9.57□□□□□ -0.88
PDLIM2-213ENST00000448520 SVBPQ8N300 66 aa9.57□□□□□ -0.88
PDLIM2-213ENST00000448520 ANAPC16Q96DE5 110 aa9.57□□□□□ -0.88
PDLIM2-213ENST00000448520 JPT2Q9H910 190 aa9.57□□□□□ -0.88
PDLIM2-213ENST00000448520 MSRB1Q9NZV6 116 aa9.57□□□□□ -0.88
PDLIM2-213ENST00000448520 PHLDA3Q9Y5J5 127 aa9.57□□□□□ -0.88
PDLIM2-213ENST00000448520 SMIM27A0A1W2PRY6 76 aa9.56□□□□□ -0.88
PDLIM2-213ENST00000448520 C16orf90A8MZG2 172 aa9.56□□□□□ -0.88
PDLIM2-213ENST00000448520 PPP1R2P9O14990 202 aa9.56□□□□□ -0.88
PDLIM2-213ENST00000448520 SNAPINO95295 136 aa9.56□□□□□ -0.88
PDLIM2-213ENST00000448520 OR5AL1P0C617 328 aa9.56□□□□□ -0.88
PDLIM2-213ENST00000448520 LINC00612Q8N6U2 182 aa9.56□□□□□ -0.88
PDLIM2-213ENST00000448520 NUP35Q8NFH5 326 aa9.56□□□□□ -0.88
PDLIM2-213ENST00000448520 SPXQ9BT56 116 aa9.56□□□□□ -0.88
PDLIM2-213ENST00000448520 CDK2AP2O75956 126 aa9.55□□□□□ -0.88
PDLIM2-213ENST00000448520 IGHV3-53P01767 116 aa9.55□□□□□ -0.88
PDLIM2-213ENST00000448520 RHEBQ15382 184 aa9.55□□□□□ -0.88
PDLIM2-213ENST00000448520 ZNF876PQ49A33 203 aa9.55□□□□□ -0.88
PDLIM2-213ENST00000448520 LINC00588Q9Y4M8 146 aa9.55□□□□□ -0.88
PDLIM2-213ENST00000448520 NXPH4O95158 308 aa9.54□□□□□ -0.88
PDLIM2-213ENST00000448520 SPANXN1Q5VSR9 72 aa9.54□□□□□ -0.88
PDLIM2-213ENST00000448520 ZFP82Q8N141 532 aa9.54□□□□□ -0.88
PDLIM2-213ENST00000448520 RASL10AQ92737 203 aa9.54□□□□□ -0.88
PDLIM2-213ENST00000448520 SAMD10Q9BYL1 202 aa9.54□□□□□ -0.88
PDLIM2-213ENST00000448520 CTDSP1Q9GZU7 261 aa9.54□□□□□ -0.88
PDLIM2-213ENST00000448520 GFRA4Q9GZZ7 299 aa9.54□□□□□ -0.88
PDLIM2-213ENST00000448520 Q9H8V8 135 aa9.54□□□□□ -0.88
PDLIM2-213ENST00000448520 A0A087WWC5 75 aa9.53□□□□□ -0.88
PDLIM2-213ENST00000448520 A0A1W2PPQ1 181 aa9.53□□□□□ -0.88
PDLIM2-213ENST00000448520 FOXA3P55318 350 aaPredicted RBP9.53□□□□□ -0.88
PDLIM2-213ENST00000448520 KRTAP4-5Q9BYR2 181 aa9.53□□□□□ -0.88
PDLIM2-213ENST00000448520 NAT8BQ9UHF3 227 aa9.53□□□□□ -0.88
PDLIM2-213ENST00000448520 URGCP-MRPS24S4R325 110 aa9.53□□□□□ -0.88
PDLIM2-213ENST00000448520 TRGV2A0A075B6R0 118 aa9.52□□□□□ -0.89
PDLIM2-213ENST00000448520 A0A087WWL8 130 aa9.52□□□□□ -0.89
PDLIM2-213ENST00000448520 IGHV3-73A0A0B4J1V6 119 aa9.52□□□□□ -0.89
PDLIM2-213ENST00000448520 F2Z2F3 143 aa9.52□□□□□ -0.89
PDLIM2-213ENST00000448520 BTF3P20290 206 aaKnown RBP9.52□□□□□ -0.89
PDLIM2-213ENST00000448520 NTF3P20783 257 aa9.52□□□□□ -0.89
PDLIM2-213ENST00000448520 CACNG7P62955 275 aa9.52□□□□□ -0.89
PDLIM2-213ENST00000448520 TTC32Q5I0X7 151 aa9.52□□□□□ -0.89
PDLIM2-213ENST00000448520 MRPL54Q6P161 138 aaKnown RBP9.52□□□□□ -0.89
PDLIM2-213ENST00000448520 SYT8Q8NBV8 401 aa9.52□□□□□ -0.89
PDLIM2-213ENST00000448520 ZNF479Q96JC4 524 aa9.52□□□□□ -0.89
PDLIM2-213ENST00000448520 HSPG2P98160 4391 aa9.51□□□□□ -0.89
PDLIM2-213ENST00000448520 FAM231BA6NCW3 169 aa9.51□□□□□ -0.89
PDLIM2-213ENST00000448520 H3BNG1 76 aa9.51□□□□□ -0.89
PDLIM2-213ENST00000448520 RS1O15537 224 aa9.51□□□□□ -0.89
PDLIM2-213ENST00000448520 SCO1O75880 301 aa9.51□□□□□ -0.89
PDLIM2-213ENST00000448520 TWIST1Q15672 202 aa9.51□□□□□ -0.89
PDLIM2-213ENST00000448520 CFAP126Q5VTH2 177 aa9.51□□□□□ -0.89
PDLIM2-213ENST00000448520 CBLN2Q8IUK8 224 aa9.51□□□□□ -0.89
PDLIM2-213ENST00000448520 PTH2Q96A98 100 aa9.51□□□□□ -0.89
PDLIM2-213ENST00000448520 CNFNQ9BYD5 112 aa9.51□□□□□ -0.89
PDLIM2-213ENST00000448520 TRAV26-1A0A087WT03 109 aa9.5□□□□□ -0.89
PDLIM2-213ENST00000448520 A0A1B0GUT8 65 aa9.5□□□□□ -0.89
PDLIM2-213ENST00000448520 HOXA5P20719 270 aa9.5□□□□□ -0.89
PDLIM2-213ENST00000448520 EVI2AP22794 236 aa9.5□□□□□ -0.89
PDLIM2-213ENST00000448520 FAM74A4Q5TZK3 123 aa9.5□□□□□ -0.89
PDLIM2-213ENST00000448520 C14orf178Q8N769 122 aaPredicted RBP9.5□□□□□ -0.89
PDLIM2-213ENST00000448520 OR4C5Q8NGB2 326 aa9.5□□□□□ -0.89
PDLIM2-213ENST00000448520 BORCS7Q96B45 105 aa9.5□□□□□ -0.89
PDLIM2-213ENST00000448520 UPK3BQ9BT76 320 aa9.5□□□□□ -0.89
PDLIM2-213ENST00000448520 TRAV4A0A0B4J268 109 aa9.49□□□□□ -0.89
PDLIM2-213ENST00000448520 CRYGDP07320 174 aa9.49□□□□□ -0.89
PDLIM2-213ENST00000448520 Q6ZSN1 163 aa9.49□□□□□ -0.89
PDLIM2-213ENST00000448520 TMEM242Q9NWH2 141 aa9.49□□□□□ -0.89
PDLIM2-213ENST00000448520 A0A1B0GXF2 115 aa9.48□□□□□ -0.89
PDLIM2-213ENST00000448520 CAMPP49913 170 aa9.48□□□□□ -0.89
PDLIM2-213ENST00000448520 RIGQ13278 110 aa9.48□□□□□ -0.89
PDLIM2-213ENST00000448520 WDR73Q6P4I2 378 aa9.48□□□□□ -0.89
PDLIM2-213ENST00000448520 SPATA12Q7Z6I5 190 aa9.48□□□□□ -0.89
PDLIM2-213ENST00000448520 MAPKAPK5-AS1Q8N8E1 139 aa9.48□□□□□ -0.89
PDLIM2-213ENST00000448520 C18orf15Q96N68 181 aa9.48□□□□□ -0.89
PDLIM2-213ENST00000448520 AP1S3Q96PC3 154 aa9.48□□□□□ -0.89
PDLIM2-213ENST00000448520 IMMP2LQ96T52 175 aa9.48□□□□□ -0.89
PDLIM2-213ENST00000448520 KIF25-AS1Q9Y6Z4 181 aa9.48□□□□□ -0.89
PDLIM2-213ENST00000448520 LRP1BQ9NZR2 4599 aa9.48□□□□□ -0.89
PDLIM2-213ENST00000448520 TGIF2-C20orf24A0A0A6YYL0 155 aa9.47□□□□□ -0.89
PDLIM2-213ENST00000448520 A8MWV9 139 aa9.47□□□□□ -0.89
PDLIM2-213ENST00000448520 MGPP08493 103 aa9.47□□□□□ -0.89
PDLIM2-213ENST00000448520 LINC00315P59091 139 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms