RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 EBI3Q14213 229 aa12.12□□□□□ -0.47
SIK3-205ENST00000446921 CRYGDP07320 174 aa12.11□□□□□ -0.47
SIK3-205ENST00000446921 FAM74A4Q5TZK3 123 aa12.11□□□□□ -0.47
SIK3-205ENST00000446921 Q5XG85 94 aa12.11□□□□□ -0.47
SIK3-205ENST00000446921 IGLV2-23P01705 113 aa12.11□□□□□ -0.47
SIK3-205ENST00000446921 C9orf85Q96MD7 179 aa12.11□□□□□ -0.47
SIK3-205ENST00000446921 DSCAMO60469 2012 aa12.1□□□□□ -0.47
SIK3-205ENST00000446921 TRBV30A0A0K0K1B3 111 aa12.1□□□□□ -0.47
SIK3-205ENST00000446921 RBMY1BA6NDE4 496 aaKnown RBP12.1□□□□□ -0.47
SIK3-205ENST00000446921 RBMY1EA6NEQ0 496 aaKnown RBP12.1□□□□□ -0.47
SIK3-205ENST00000446921 IGLV3-19P01714 112 aa12.1□□□□□ -0.47
SIK3-205ENST00000446921 RBMY1DP0C7P1 496 aaKnown RBP12.1□□□□□ -0.47
SIK3-205ENST00000446921 RBMY1A1P0DJD3 496 aaKnown RBP12.1□□□□□ -0.47
SIK3-205ENST00000446921 RBMY1CP0DJD4 496 aa12.1□□□□□ -0.47
SIK3-205ENST00000446921 NDPQ00604 133 aa12.1□□□□□ -0.47
SIK3-205ENST00000446921 RBMY1FQ15415 496 aaKnown RBP12.1□□□□□ -0.47
SIK3-205ENST00000446921 LINC00311Q8N616 119 aa12.1□□□□□ -0.47
SIK3-205ENST00000446921 CACNA1GO43497 2377 aa12.1□□□□□ -0.47
SIK3-205ENST00000446921 WDFY3Q8IZQ1 3526 aa12.09□□□□□ -0.47
SIK3-205ENST00000446921 TMEM200BQ69YZ2 307 aa12.09□□□□□ -0.47
SIK3-205ENST00000446921 OPRPNQ99935 248 aaPredicted RBP12.09□□□□□ -0.47
SIK3-205ENST00000446921 M0R1W7 72 aa12.09□□□□□ -0.47
SIK3-205ENST00000446921 ZNF672Q499Z4 452 aaPredicted RBP12.09□□□□□ -0.47
SIK3-205ENST00000446921 LINC01546A6NGU7 62 aa12.09□□□□□ -0.47
SIK3-205ENST00000446921 GFRALQ6UXV0 394 aa12.09□□□□□ -0.47
SIK3-205ENST00000446921 PRORYQ9H606 182 aa12.09□□□□□ -0.47
SIK3-205ENST00000446921 I3L2K1 104 aa12.08□□□□□ -0.48
SIK3-205ENST00000446921 MPLKIPQ8TAP9 179 aa12.08□□□□□ -0.48
SIK3-205ENST00000446921 MALRD1Q5VYJ5 2156 aa12.08□□□□□ -0.48
SIK3-205ENST00000446921 A0A087WVE0 104 aa12.08□□□□□ -0.48
SIK3-205ENST00000446921 PRUNE2Q8WUY3 3088 aa12.08□□□□□ -0.48
SIK3-205ENST00000446921 IGKV3-7A0A075B6H7 116 aa12.08□□□□□ -0.48
SIK3-205ENST00000446921 IGHV1-18A0A0C4DH31 117 aa12.08□□□□□ -0.48
SIK3-205ENST00000446921 LOXP28300 417 aaPredicted RBP12.08□□□□□ -0.48
SIK3-205ENST00000446921 RPL11P62913 178 aaKnown RBP12.08□□□□□ -0.48
SIK3-205ENST00000446921 A0A0G2JNJ9 132 aa12.07□□□□□ -0.48
SIK3-205ENST00000446921 C17orf100A8MU93 164 aa12.07□□□□□ -0.48
SIK3-205ENST00000446921 OXTP01178 125 aa12.07□□□□□ -0.48
SIK3-205ENST00000446921 C11orf21Q9P2W6 132 aa12.07□□□□□ -0.48
SIK3-205ENST00000446921 Q9UFV3 132 aa12.07□□□□□ -0.48
SIK3-205ENST00000446921 SIT1Q9Y3P8 196 aa12.07□□□□□ -0.48
SIK3-205ENST00000446921 I3L3M4 83 aa12.07□□□□□ -0.48
SIK3-205ENST00000446921 DAND5Q8N907 189 aa12.07□□□□□ -0.48
SIK3-205ENST00000446921 TMEM190Q8WZ59 177 aa12.07□□□□□ -0.48
SIK3-205ENST00000446921 U3KQE9 123 aa12.07□□□□□ -0.48
SIK3-205ENST00000446921 TMEM30BQ3MIR4 351 aa12.06□□□□□ -0.48
SIK3-205ENST00000446921 CYSTM1Q9H1C7 97 aa12.06□□□□□ -0.48
SIK3-205ENST00000446921 NTN3O00634 580 aaPredicted RBP12.06□□□□□ -0.48
SIK3-205ENST00000446921 WT1P19544 449 aaPredicted RBP12.06□□□□□ -0.48
SIK3-205ENST00000446921 NBL1P41271 181 aa12.06□□□□□ -0.48
SIK3-205ENST00000446921 FAM223AQ8IWN6 122 aa12.06□□□□□ -0.48
SIK3-205ENST00000446921 CNFNQ9BYD5 112 aa12.06□□□□□ -0.48
SIK3-205ENST00000446921 USP17L23D6RBM5 183 aa12.05□□□□□ -0.48
SIK3-205ENST00000446921 K7EIM0 57 aa12.05□□□□□ -0.48
SIK3-205ENST00000446921 IGKV3-15P01624 115 aa12.05□□□□□ -0.48
SIK3-205ENST00000446921 BAALC-AS2P0C853 105 aa12.05□□□□□ -0.48
SIK3-205ENST00000446921 A0A0J9YXV3 536 aa12.04□□□□□ -0.48
SIK3-205ENST00000446921 DAZ2Q13117 558 aaKnown RBP12.04□□□□□ -0.48
SIK3-205ENST00000446921 MSMPQ1L6U9 139 aa12.04□□□□□ -0.48
SIK3-205ENST00000446921 DAZ4Q86SG3 579 aaKnown RBP12.04□□□□□ -0.48
SIK3-205ENST00000446921 DAZ1Q9NQZ3 744 aaKnown RBP12.04□□□□□ -0.48
SIK3-205ENST00000446921 DAZ3Q9NR90 486 aaKnown RBP12.04□□□□□ -0.48
SIK3-205ENST00000446921 IGLV4-69A0A075B6H9 119 aa12.04□□□□□ -0.48
SIK3-205ENST00000446921 TRAV12-2A0A075B6T6 113 aa12.04□□□□□ -0.48
SIK3-205ENST00000446921 A0A087WWL8 130 aa12.04□□□□□ -0.48
SIK3-205ENST00000446921 TMEM223A0PJW6 202 aa12.04□□□□□ -0.48
SIK3-205ENST00000446921 LEPROTO15243 131 aa12.04□□□□□ -0.48
SIK3-205ENST00000446921 SPTA1P02549 2419 aa12.04□□□□□ -0.48
SIK3-205ENST00000446921 GVINP1Q7Z2Y8 2422 aa12.04□□□□□ -0.48
SIK3-205ENST00000446921 INAFM2P0DMQ5 153 aa12.04□□□□□ -0.48
SIK3-205ENST00000446921 SMCR5Q8TEV8 140 aa12.04□□□□□ -0.48
SIK3-205ENST00000446921 COPS9Q8WXC6 57 aa12.04□□□□□ -0.48
SIK3-205ENST00000446921 ZNF625Q96I27 306 aaPredicted RBP12.04□□□□□ -0.48
SIK3-205ENST00000446921 TRBV7-1A0A0A6YYK4 115 aa12.03□□□□□ -0.48
SIK3-205ENST00000446921 LST1O00453 97 aa12.03□□□□□ -0.48
SIK3-205ENST00000446921 LINC01561Q8N1V8 128 aa12.03□□□□□ -0.48
SIK3-205ENST00000446921 TIMM21Q9BVV7 248 aa12.03□□□□□ -0.48
SIK3-205ENST00000446921 SPRR3Q9UBC9 169 aa12.03□□□□□ -0.48
SIK3-205ENST00000446921 GHRHP01286 108 aa12.03□□□□□ -0.48
SIK3-205ENST00000446921 PPP1R17O96001 155 aa12.03□□□□□ -0.48
SIK3-205ENST00000446921 A0A0J9YXY3 114 aa12.02□□□□□ -0.48
SIK3-205ENST00000446921 EIF4EBP3O60516 100 aaPredicted RBP12.02□□□□□ -0.48
SIK3-205ENST00000446921 ZNF580Q9UK33 172 aa12.02□□□□□ -0.48
SIK3-205ENST00000446921 CXCL5P42830 114 aa12.02□□□□□ -0.49
SIK3-205ENST00000446921 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.02□□□□□ -0.49
SIK3-205ENST00000446921 TEX22C9J3V5 150 aa12.02□□□□□ -0.49
SIK3-205ENST00000446921 NDUFA12Q9UI09 145 aa12.02□□□□□ -0.49
SIK3-205ENST00000446921 CHD9Q3L8U1 2897 aa12.01□□□□□ -0.49
SIK3-205ENST00000446921 TRAV23DV6A0A075B6W5 121 aa12.01□□□□□ -0.49
SIK3-205ENST00000446921 IGHG2P01859 326 aa12.01□□□□□ -0.49
SIK3-205ENST00000446921 VCYO14598 125 aa12.01□□□□□ -0.49
SIK3-205ENST00000446921 TMEM141Q96I45 108 aa12.01□□□□□ -0.49
SIK3-205ENST00000446921 SMIM26A0A096LP01 95 aa12□□□□□ -0.49
SIK3-205ENST00000446921 SDHAF1A6NFY7 115 aa12□□□□□ -0.49
SIK3-205ENST00000446921 IGHV1-46P01743 117 aa12□□□□□ -0.49
SIK3-205ENST00000446921 RNASE4P34096 147 aaKnown RBP12□□□□□ -0.49
SIK3-205ENST00000446921 TIMM17BO60830 172 aa11.99□□□□□ -0.49
SIK3-205ENST00000446921 NXPH4O95158 308 aa11.99□□□□□ -0.49
SIK3-205ENST00000446921 RNASE13Q5GAN3 156 aaKnown RBP11.99□□□□□ -0.49
SIK3-205ENST00000446921 PTPRZ1P23471 2315 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms