RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 PSMB3P49720 205 aa4.39□□□□□ -1.71
MCF2-206ENST00000446225 HERVK_113P63121 156 aa4.39□□□□□ -1.71
MCF2-206ENST00000446225 PLGLAQ15195 96 aa4.39□□□□□ -1.71
MCF2-206ENST00000446225 MRGPRG-AS1Q2M3A8 158 aa4.39□□□□□ -1.71
MCF2-206ENST00000446225 CLLU1Q5K131 121 aa4.39□□□□□ -1.71
MCF2-206ENST00000446225 ZC2HC1BQ5TFG8 222 aa4.39□□□□□ -1.71
MCF2-206ENST00000446225 UNQ9165/PRO28630Q6UXU0 137 aa4.39□□□□□ -1.71
MCF2-206ENST00000446225 ZNF329Q86UD4 541 aa4.39□□□□□ -1.71
MCF2-206ENST00000446225 C14orf178Q8N769 122 aaPredicted RBP4.39□□□□□ -1.71
MCF2-206ENST00000446225 C5orf17Q8NAS9 161 aa4.39□□□□□ -1.71
MCF2-206ENST00000446225 C18orf15Q96N68 181 aa4.39□□□□□ -1.71
MCF2-206ENST00000446225 VGLL1Q99990 258 aa4.39□□□□□ -1.71
MCF2-206ENST00000446225 MED28Q9H204 178 aa4.39□□□□□ -1.71
MCF2-206ENST00000446225 INS-IGF2F8WCM5 200 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 G3V318 75 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 TMEM250H0YL14 139 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 TRAPPC2P0DI81 140 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 TRAPPC2BP0DI82 140 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 CXCL5P42830 114 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 NDPQ00604 133 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 PRR15Q8IV56 129 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 CEND1Q8N111 149 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 ZNF664Q8N3J9 261 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 OR10D4PQ8NGN7 298 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 GNPNAT1Q96EK6 184 aaPredicted RBP4.38□□□□□ -1.71
MCF2-206ENST00000446225 GGTLC1Q9BX51 225 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 PRO1933Q9H354 126 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 SAA1P0DJI8 122 aaPredicted RBP4.38□□□□□ -1.71
MCF2-206ENST00000446225 CATR1Q13166 79 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 FXYD3Q14802 87 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 VMA21Q3ZAQ7 101 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 MEIG1Q5JSS6 88 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 TOMM5Q8N4H5 51 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 FAM103A1Q9BTL3 118 aaKnown RBP4.38□□□□□ -1.71
MCF2-206ENST00000446225 DERL1Q9BUN8 251 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 CHAC1Q9BUX1 264 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 KRTAP4-2Q9BYR5 136 aa4.38□□□□□ -1.71
MCF2-206ENST00000446225 TRAV3A0A0B4J244 114 aa4.37□□□□□ -1.71
MCF2-206ENST00000446225 TRAV41A0A0B4J266 112 aa4.37□□□□□ -1.71
MCF2-206ENST00000446225 TCRBV4S1A1TA0A5B7 111 aa4.37□□□□□ -1.71
MCF2-206ENST00000446225 IZUMO1RA6ND01 250 aa4.37□□□□□ -1.71
MCF2-206ENST00000446225 ZFP92A6NM28 416 aa4.37□□□□□ -1.71
MCF2-206ENST00000446225 COX7A2P2O60397 106 aa4.37□□□□□ -1.71
MCF2-206ENST00000446225 HRASP01112 189 aa4.37□□□□□ -1.71
MCF2-206ENST00000446225 CTSDP07339 412 aaPredicted RBP4.37□□□□□ -1.71
MCF2-206ENST00000446225 SP6Q3SY56 376 aa4.37□□□□□ -1.71
MCF2-206ENST00000446225 NAA38Q9BRA0 125 aaKnown RBP4.37□□□□□ -1.71
MCF2-206ENST00000446225 TM2D3Q9BRN9 247 aa4.37□□□□□ -1.71
MCF2-206ENST00000446225 TMEM191AQ9H0A3 160 aa4.37□□□□□ -1.71
MCF2-206ENST00000446225 KRASP01116 189 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 IGKV1-39P01597 117 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 IGLV2-8P01709 118 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 IGKV1D-39P04432 117 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 GIG44P09565 113 aaPredicted RBP4.36□□□□□ -1.71
MCF2-206ENST00000446225 IL7P13232 177 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 OPRK1P41145 380 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 INPP1P49441 399 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 CRIP2P52943 208 aaPredicted RBP4.36□□□□□ -1.71
MCF2-206ENST00000446225 TMEM167AQ8TBQ9 72 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 C16orf74Q96GX8 76 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 PLXNB1O43157 2135 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 TRRAPQ9Y4A5 3859 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 A0A0J9YWU9 116 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 C3orf85A0A1B0GTC6 90 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 E7EUB6 86 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 M0R381 172 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 PLA2G10O15496 165 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 APELAP0DMC3 54 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 FAUP35544 74 aaKnown RBP4.36□□□□□ -1.71
MCF2-206ENST00000446225 TPPP2P59282 170 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 C10orf55Q5SWW7 151 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 UNQ5815/PRO19632Q6UWF5 114 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 LINC00299Q6ZSB3 139 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 C18orf65Q6ZTR6 163 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 OR4X2Q8NGF9 303 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 SGMS2Q8NHU3 365 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 CAMK2N2Q96S95 79 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 C11orf68Q9H3H3 251 aaKnown RBP4.36□□□□□ -1.71
MCF2-206ENST00000446225 OTORQ9NRC9 128 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 ZNF580Q9UK33 172 aa4.36□□□□□ -1.71
MCF2-206ENST00000446225 CRYM-AS1A6NIL9 109 aa4.35□□□□□ -1.71
MCF2-206ENST00000446225 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
MCF2-206ENST00000446225 INSP01308 110 aa4.35□□□□□ -1.71
MCF2-206ENST00000446225 FOXI2Q6ZQN5 318 aa4.35□□□□□ -1.71
MCF2-206ENST00000446225 NDUFA11Q86Y39 141 aa4.35□□□□□ -1.71
MCF2-206ENST00000446225 OR4A5Q8NH83 315 aa4.35□□□□□ -1.71
MCF2-206ENST00000446225 VSTM2AQ8TAG5 236 aa4.35□□□□□ -1.71
MCF2-206ENST00000446225 S100ZQ8WXG8 99 aa4.35□□□□□ -1.71
MCF2-206ENST00000446225 SPANXDQ9BXN6 97 aa4.35□□□□□ -1.71
MCF2-206ENST00000446225 ZNF436Q9C0F3 470 aaPredicted RBP4.35□□□□□ -1.71
MCF2-206ENST00000446225 NAA60Q9H7X0 242 aa4.35□□□□□ -1.71
MCF2-206ENST00000446225 BET1LQ9NYM9 111 aa4.35□□□□□ -1.71
MCF2-206ENST00000446225 CMYA5Q8N3K9 4069 aa4.35□□□□□ -1.71
MCF2-206ENST00000446225 C7orf71A4D174 169 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 NAP1L6A6NFF2 107 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 FNDC10F2Z333 226 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 CCDC179H3BU77 68 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 IGKV1-5P01602 117 aa4.34□□□□□ -1.71
MCF2-206ENST00000446225 OR5AC1P0C628 307 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms