RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 RTL8CO15255 209 aa16.49■□□□□ 0.23
C9orf3-207ENST00000445181 Q6ZR54 194 aa16.49■□□□□ 0.23
C9orf3-207ENST00000445181 FER1L6-AS1Q8NA97 138 aa16.49■□□□□ 0.23
C9orf3-207ENST00000445181 NUDT10Q8NFP7 164 aa16.49■□□□□ 0.23
C9orf3-207ENST00000445181 NUDT11Q96G61 164 aa16.49■□□□□ 0.23
C9orf3-207ENST00000445181 NBDYA0A0U1RRE5 68 aa16.48■□□□□ 0.23
C9orf3-207ENST00000445181 SRP19P09132 144 aaKnown RBP16.48■□□□□ 0.23
C9orf3-207ENST00000445181 UFSP1Q6NVU6 142 aa16.48■□□□□ 0.23
C9orf3-207ENST00000445181 Q6ZSN1 163 aa16.48■□□□□ 0.23
C9orf3-207ENST00000445181 RNASE7Q9H1E1 156 aaKnown RBP16.48■□□□□ 0.23
C9orf3-207ENST00000445181 PRSS29PA6NIE9 313 aa16.47■□□□□ 0.23
C9orf3-207ENST00000445181 NXPH4O95158 308 aa16.47■□□□□ 0.23
C9orf3-207ENST00000445181 ZNF727A8MUV8 499 aa16.46■□□□□ 0.23
C9orf3-207ENST00000445181 CRYGDP07320 174 aa16.46■□□□□ 0.23
C9orf3-207ENST00000445181 RPP21Q9H633 154 aaKnown RBP16.46■□□□□ 0.23
C9orf3-207ENST00000445181 IGLC6P0CF74 106 aa16.45■□□□□ 0.22
C9orf3-207ENST00000445181 PEA15Q15121 130 aa16.45■□□□□ 0.22
C9orf3-207ENST00000445181 HECTD4Q9Y4D8 3996 aa16.45■□□□□ 0.22
C9orf3-207ENST00000445181 A0A1B0GVY2 172 aa16.44■□□□□ 0.22
C9orf3-207ENST00000445181 SIVA1O15304 175 aa16.44■□□□□ 0.22
C9orf3-207ENST00000445181 SOHLH1Q5JUK2 328 aa16.44■□□□□ 0.22
C9orf3-207ENST00000445181 C14orf178Q8N769 122 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-207ENST00000445181 LY96Q9Y6Y9 160 aa16.44■□□□□ 0.22
C9orf3-207ENST00000445181 A0A1W2PPQ1 181 aa16.43■□□□□ 0.22
C9orf3-207ENST00000445181 GAGE12JA6NER3 117 aa16.43■□□□□ 0.22
C9orf3-207ENST00000445181 SMIM17P0DL12 118 aa16.43■□□□□ 0.22
C9orf3-207ENST00000445181 RAB14P61106 215 aa16.43■□□□□ 0.22
C9orf3-207ENST00000445181 GAGE1Q13065 139 aa16.43■□□□□ 0.22
C9orf3-207ENST00000445181 GAGE4Q13068 117 aa16.43■□□□□ 0.22
C9orf3-207ENST00000445181 GAGE5Q13069 117 aa16.43■□□□□ 0.22
C9orf3-207ENST00000445181 GAGE13Q4V321 117 aa16.43■□□□□ 0.22
C9orf3-207ENST00000445181 TTC32Q5I0X7 151 aa16.43■□□□□ 0.22
C9orf3-207ENST00000445181 C1orf134Q5TEV5 83 aa16.43■□□□□ 0.22
C9orf3-207ENST00000445181 F2Z2F3 143 aa16.42■□□□□ 0.22
C9orf3-207ENST00000445181 ERVFC1-1P60608 527 aa16.42■□□□□ 0.22
C9orf3-207ENST00000445181 CACNG7P62955 275 aa16.42■□□□□ 0.22
C9orf3-207ENST00000445181 ZNF56Q15929 161 aa16.42■□□□□ 0.22
C9orf3-207ENST00000445181 AP1S3Q96PC3 154 aa16.42■□□□□ 0.22
C9orf3-207ENST00000445181 GATCO43716 136 aaKnown RBP16.41■□□□□ 0.22
C9orf3-207ENST00000445181 LYZL1Q6UWQ5 148 aa16.41■□□□□ 0.22
C9orf3-207ENST00000445181 ATP6V0E2Q8NHE4 81 aa16.41■□□□□ 0.22
C9orf3-207ENST00000445181 DNAH17Q9UFH2 4485 aa16.41■□□□□ 0.22
C9orf3-207ENST00000445181 SRSF3P84103 164 aaKnown RBP16.4■□□□□ 0.22
C9orf3-207ENST00000445181 FAM74A3Q4VXF1 159 aa16.4■□□□□ 0.22
C9orf3-207ENST00000445181 LINC01551Q86U37 167 aa16.4■□□□□ 0.22
C9orf3-207ENST00000445181 F5H697 171 aa16.39■□□□□ 0.21
C9orf3-207ENST00000445181 RAB4BP61018 213 aa16.39■□□□□ 0.21
C9orf3-207ENST00000445181 FAM231DQ6ZW35 169 aa16.39■□□□□ 0.21
C9orf3-207ENST00000445181 SMDT1Q9H4I9 107 aa16.39■□□□□ 0.21
C9orf3-207ENST00000445181 C9JQL5 133 aa16.38■□□□□ 0.21
C9orf3-207ENST00000445181 TIRAPP58753 221 aa16.38■□□□□ 0.21
C9orf3-207ENST00000445181 TMEM241Q24JQ0 296 aa16.38■□□□□ 0.21
C9orf3-207ENST00000445181 GTSF1LQ9H1H1 148 aa16.38■□□□□ 0.21
C9orf3-207ENST00000445181 Q9UF83 564 aa16.38■□□□□ 0.21
C9orf3-207ENST00000445181 FAT2Q9NYQ8 4349 aa16.38■□□□□ 0.21
C9orf3-207ENST00000445181 WFDC10BQ8IUB3 73 aa16.37■□□□□ 0.21
C9orf3-207ENST00000445181 C6orf223Q8N319 242 aa16.37■□□□□ 0.21
C9orf3-207ENST00000445181 MSRB1Q9NZV6 116 aa16.37■□□□□ 0.21
C9orf3-207ENST00000445181 CTRLP40313 264 aa16.36■□□□□ 0.21
C9orf3-207ENST00000445181 OR10J3Q5JRS4 329 aa16.36■□□□□ 0.21
C9orf3-207ENST00000445181 KRTAP1-5Q9BYS1 174 aa16.36■□□□□ 0.21
C9orf3-207ENST00000445181 TRAV8-6A0A0B4J262 113 aa16.35■□□□□ 0.21
C9orf3-207ENST00000445181 TRBV10-1A0A0K0K1A3 114 aa16.35■□□□□ 0.21
C9orf3-207ENST00000445181 A8MWL6 223 aa16.35■□□□□ 0.21
C9orf3-207ENST00000445181 MGPP08493 103 aa16.35■□□□□ 0.21
C9orf3-207ENST00000445181 NTF3P20783 257 aa16.35■□□□□ 0.21
C9orf3-207ENST00000445181 RPL36AP83881 106 aaKnown RBP16.35■□□□□ 0.21
C9orf3-207ENST00000445181 RPL36ALQ969Q0 106 aaKnown RBP16.35■□□□□ 0.21
C9orf3-207ENST00000445181 TRAV9-2A0A087WT02 112 aa16.34■□□□□ 0.21
C9orf3-207ENST00000445181 TRGC1P0CF51 173 aa16.34■□□□□ 0.21
C9orf3-207ENST00000445181 LINC00694P0DN24 101 aa16.34■□□□□ 0.21
C9orf3-207ENST00000445181 TWIST1Q15672 202 aa16.34■□□□□ 0.21
C9orf3-207ENST00000445181 WDR73Q6P4I2 378 aa16.34■□□□□ 0.21
C9orf3-207ENST00000445181 NAT8Q9UHE5 227 aa16.34■□□□□ 0.21
C9orf3-207ENST00000445181 EVI2AP22794 236 aa16.33■□□□□ 0.2
C9orf3-207ENST00000445181 ADIRFQ15847 76 aa16.33■□□□□ 0.2
C9orf3-207ENST00000445181 CT83Q5H943 113 aa16.33■□□□□ 0.2
C9orf3-207ENST00000445181 LELP1Q5T871 98 aa16.33■□□□□ 0.2
C9orf3-207ENST00000445181 C15orf54Q8N8G6 183 aa16.33■□□□□ 0.2
C9orf3-207ENST00000445181 GTSF1Q8WW33 167 aa16.33■□□□□ 0.2
C9orf3-207ENST00000445181 KIF25-AS1Q9Y6Z4 181 aa16.33■□□□□ 0.2
C9orf3-207ENST00000445181 OSTCQ9NRP0 149 aa16.32■□□□□ 0.2
C9orf3-207ENST00000445181 TRBV7-3A0A075B6L6 115 aa16.31■□□□□ 0.2
C9orf3-207ENST00000445181 RPL23P62829 140 aaKnown RBP16.31■□□□□ 0.2
C9orf3-207ENST00000445181 PGLYRP4Q96LB8 373 aa16.31■□□□□ 0.2
C9orf3-207ENST00000445181 IGHV3-38A0A0C4DH36 116 aa16.3■□□□□ 0.2
C9orf3-207ENST00000445181 DNAH10OSP0CZ25 163 aa16.3■□□□□ 0.2
C9orf3-207ENST00000445181 ISOC2Q96AB3 205 aa16.3■□□□□ 0.2
C9orf3-207ENST00000445181 CNFNQ9BYD5 112 aa16.3■□□□□ 0.2
C9orf3-207ENST00000445181 DPH3P1Q9H4G8 78 aa16.3■□□□□ 0.2
C9orf3-207ENST00000445181 LINC00315P59091 139 aa16.29■□□□□ 0.2
C9orf3-207ENST00000445181 OR10G8Q8NGN5 311 aa16.29■□□□□ 0.2
C9orf3-207ENST00000445181 TSKUQ8WUA8 353 aa16.29■□□□□ 0.2
C9orf3-207ENST00000445181 BORCS7Q96B45 105 aa16.29■□□□□ 0.2
C9orf3-207ENST00000445181 A0A087WWC5 75 aa16.28■□□□□ 0.2
C9orf3-207ENST00000445181 UBE2D3P61077 147 aa16.28■□□□□ 0.2
C9orf3-207ENST00000445181 UBE2D2P62837 147 aa16.28■□□□□ 0.2
C9orf3-207ENST00000445181 CLLU1Q5K131 121 aa16.28■□□□□ 0.2
C9orf3-207ENST00000445181 SMIM15Q7Z3B0 74 aa16.28■□□□□ 0.2
C9orf3-207ENST00000445181 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms