RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 SFRP2Q96HF1 295 aa11.73□□□□□ -0.53
PDCD4-203ENST00000444997 SCRT2Q9NQ03 307 aa11.73□□□□□ -0.53
PDCD4-203ENST00000444997 A0A087WWC5 75 aa11.72□□□□□ -0.53
PDCD4-203ENST00000444997 RAB5CP51148 216 aa11.72□□□□□ -0.53
PDCD4-203ENST00000444997 C14orf178Q8N769 122 aaPredicted RBP11.72□□□□□ -0.53
PDCD4-203ENST00000444997 MANBALQ9NQG1 85 aa11.72□□□□□ -0.53
PDCD4-203ENST00000444997 A0A087WWL8 130 aa11.71□□□□□ -0.53
PDCD4-203ENST00000444997 Q9HAA7 133 aa11.71□□□□□ -0.53
PDCD4-203ENST00000444997 GNG13Q9P2W3 67 aa11.71□□□□□ -0.53
PDCD4-203ENST00000444997 CXCL1P09341 107 aa11.69□□□□□ -0.54
PDCD4-203ENST00000444997 LINC00694P0DN24 101 aa11.69□□□□□ -0.54
PDCD4-203ENST00000444997 LAGE3Q14657 143 aa11.69□□□□□ -0.54
PDCD4-203ENST00000444997 PRR27Q6MZM9 219 aa11.69□□□□□ -0.54
PDCD4-203ENST00000444997 MLST8Q9BVC4 326 aa11.69□□□□□ -0.54
PDCD4-203ENST00000444997 TRAV1-1A0A0B4J248 108 aa11.68□□□□□ -0.54
PDCD4-203ENST00000444997 FUSP35637 526 aaKnown RBP eCLIP11.68□□□□□ -0.54
PDCD4-203ENST00000444997 RPL35P42766 123 aaKnown RBP11.68□□□□□ -0.54
PDCD4-203ENST00000444997 TOR2AQ5JU69 321 aa11.68□□□□□ -0.54
PDCD4-203ENST00000444997 Q8N1X5 172 aa11.68□□□□□ -0.54
PDCD4-203ENST00000444997 TM2D2Q9BX73 214 aa11.68□□□□□ -0.54
PDCD4-203ENST00000444997 URGCP-MRPS24S4R325 110 aa11.68□□□□□ -0.54
PDCD4-203ENST00000444997 PCLOQ9Y6V0 5065 aa11.68□□□□□ -0.54
PDCD4-203ENST00000444997 TRBV10-1A0A0K0K1A3 114 aa11.67□□□□□ -0.54
PDCD4-203ENST00000444997 CCL20P78556 96 aa11.67□□□□□ -0.54
PDCD4-203ENST00000444997 RPL36AP83881 106 aaKnown RBP11.67□□□□□ -0.54
PDCD4-203ENST00000444997 RPL19P84098 196 aaKnown RBP11.67□□□□□ -0.54
PDCD4-203ENST00000444997 TCTE3Q8IZS6 198 aa11.67□□□□□ -0.54
PDCD4-203ENST00000444997 RPL36ALQ969Q0 106 aaKnown RBP11.67□□□□□ -0.54
PDCD4-203ENST00000444997 KRTAP4-5Q9BYR2 181 aa11.67□□□□□ -0.54
PDCD4-203ENST00000444997 Q9UF83 564 aa11.67□□□□□ -0.54
PDCD4-203ENST00000444997 IFNA1P01562 189 aa11.66□□□□□ -0.54
PDCD4-203ENST00000444997 SPANXN1Q5VSR9 72 aa11.66□□□□□ -0.54
PDCD4-203ENST00000444997 TRAV8-3A0A0A6YYJ7 113 aa11.65□□□□□ -0.54
PDCD4-203ENST00000444997 GCSHP23434 173 aa11.65□□□□□ -0.54
PDCD4-203ENST00000444997 SULT1A2P50226 295 aa11.65□□□□□ -0.54
PDCD4-203ENST00000444997 RAB4BP61018 213 aa11.65□□□□□ -0.54
PDCD4-203ENST00000444997 ZNF56Q15929 161 aa11.65□□□□□ -0.54
PDCD4-203ENST00000444997 OR10AG1Q8NH19 301 aa11.65□□□□□ -0.54
PDCD4-203ENST00000444997 C11orf52Q96A22 123 aa11.65□□□□□ -0.54
PDCD4-203ENST00000444997 DAZAP1Q96EP5 407 aaKnown RBP11.65□□□□□ -0.54
PDCD4-203ENST00000444997 RYR1P21817 5038 aa11.65□□□□□ -0.54
PDCD4-203ENST00000444997 TRBV7-3A0A075B6L6 115 aa11.64□□□□□ -0.55
PDCD4-203ENST00000444997 LRCOL1A6NCL2 159 aa11.64□□□□□ -0.55
PDCD4-203ENST00000444997 SNAI2O43623 268 aa11.64□□□□□ -0.55
PDCD4-203ENST00000444997 OR5AL1P0C617 328 aa11.64□□□□□ -0.55
PDCD4-203ENST00000444997 KCNIP4Q6PIL6 250 aa11.64□□□□□ -0.55
PDCD4-203ENST00000444997 SLC51BQ86UW2 128 aa11.64□□□□□ -0.55
PDCD4-203ENST00000444997 NTN5Q8WTR8 489 aaPredicted RBP11.64□□□□□ -0.55
PDCD4-203ENST00000444997 IGLV5-52A0A0A0MRZ9 124 aa11.63□□□□□ -0.55
PDCD4-203ENST00000444997 PDE6DO43924 150 aa11.63□□□□□ -0.55
PDCD4-203ENST00000444997 C1QBP02746 253 aa11.63□□□□□ -0.55
PDCD4-203ENST00000444997 CENPWQ5EE01 88 aa11.63□□□□□ -0.55
PDCD4-203ENST00000444997 DAZ4Q86SG3 579 aaKnown RBP11.63□□□□□ -0.55
PDCD4-203ENST00000444997 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.63□□□□□ -0.55
PDCD4-203ENST00000444997 DERL1Q9BUN8 251 aa11.63□□□□□ -0.55
PDCD4-203ENST00000444997 SSBP4Q9BWG4 385 aaPredicted RBP11.63□□□□□ -0.55
PDCD4-203ENST00000444997 DAZ3Q9NR90 486 aaKnown RBP11.63□□□□□ -0.55
PDCD4-203ENST00000444997 F5H697 171 aa11.62□□□□□ -0.55
PDCD4-203ENST00000444997 SMIM17P0DL12 118 aa11.62□□□□□ -0.55
PDCD4-203ENST00000444997 GNG4P50150 75 aa11.62□□□□□ -0.55
PDCD4-203ENST00000444997 SSTP61278 116 aa11.62□□□□□ -0.55
PDCD4-203ENST00000444997 MEF2BQ02080 365 aaPredicted RBP11.62□□□□□ -0.55
PDCD4-203ENST00000444997 Q8N3U1 123 aa11.62□□□□□ -0.55
PDCD4-203ENST00000444997 Q8N814 137 aa11.62□□□□□ -0.55
PDCD4-203ENST00000444997 RMI2Q96E14 147 aa11.62□□□□□ -0.55
PDCD4-203ENST00000444997 COX11Q9Y6N1 276 aa11.62□□□□□ -0.55
PDCD4-203ENST00000444997 LRP1BQ9NZR2 4599 aa11.61□□□□□ -0.55
PDCD4-203ENST00000444997 A0A087WX48 190 aa11.61□□□□□ -0.55
PDCD4-203ENST00000444997 MUC21A0A0G2JKD1 596 aa11.61□□□□□ -0.55
PDCD4-203ENST00000444997 MUC21A0A140T8X8 626 aa11.61□□□□□ -0.55
PDCD4-203ENST00000444997 KRTAP10-1P60331 282 aa11.61□□□□□ -0.55
PDCD4-203ENST00000444997 RPS20P60866 119 aaKnown RBP11.61□□□□□ -0.55
PDCD4-203ENST00000444997 UBE2D3P61077 147 aa11.61□□□□□ -0.55
PDCD4-203ENST00000444997 UBE2D2P62837 147 aa11.61□□□□□ -0.55
PDCD4-203ENST00000444997 ELOBQ15370 118 aa11.61□□□□□ -0.55
PDCD4-203ENST00000444997 NIT1Q86X76 327 aa11.61□□□□□ -0.55
PDCD4-203ENST00000444997 OR10G8Q8NGN5 311 aa11.61□□□□□ -0.55
PDCD4-203ENST00000444997 SMIM12Q96EX1 92 aa11.61□□□□□ -0.55
PDCD4-203ENST00000444997 BIN3Q9NQY0 253 aa11.61□□□□□ -0.55
PDCD4-203ENST00000444997 XKRY2A2RUG3 117 aa11.6□□□□□ -0.55
PDCD4-203ENST00000444997 AP1S3Q96PC3 154 aa11.6□□□□□ -0.55
PDCD4-203ENST00000444997 CHCHD7Q9BUK0 85 aa11.6□□□□□ -0.55
PDCD4-203ENST00000444997 TPPP3Q9BW30 176 aa11.6□□□□□ -0.55
PDCD4-203ENST00000444997 MED9Q9NWA0 146 aa11.6□□□□□ -0.55
PDCD4-203ENST00000444997 TAGLN2P37802 199 aaKnown RBP11.59□□□□□ -0.55
PDCD4-203ENST00000444997 Q6ZNX1 250 aa11.59□□□□□ -0.55
PDCD4-203ENST00000444997 OR2D3Q8NGH3 330 aa11.59□□□□□ -0.55
PDCD4-203ENST00000444997 VAX2Q9UIW0 290 aa11.59□□□□□ -0.55
PDCD4-203ENST00000444997 RAB19A4D1S5 217 aa11.58□□□□□ -0.56
PDCD4-203ENST00000444997 EPM2AB3EWF7 344 aa11.58□□□□□ -0.56
PDCD4-203ENST00000444997 TMEM262E9PQX1 116 aa11.58□□□□□ -0.56
PDCD4-203ENST00000444997 BCL2P10415 239 aa11.58□□□□□ -0.56
PDCD4-203ENST00000444997 AKAP14Q86UN6 197 aa11.58□□□□□ -0.56
PDCD4-203ENST00000444997 FER1L6-AS1Q8NA97 138 aa11.58□□□□□ -0.56
PDCD4-203ENST00000444997 NEXN-AS1Q8NBZ9 246 aa11.58□□□□□ -0.56
PDCD4-203ENST00000444997 KLK12Q9UKR0 248 aa11.58□□□□□ -0.56
PDCD4-203ENST00000444997 HSPG2P98160 4391 aa11.58□□□□□ -0.56
PDCD4-203ENST00000444997 TRBV6-8A0A0A6YYG3 113 aa11.57□□□□□ -0.56
PDCD4-203ENST00000444997 IGLV2-8P01709 118 aa11.57□□□□□ -0.56
PDCD4-203ENST00000444997 P01737 135 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 195.2 ms