RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 CFHR4Q92496 578 aa8.18□□□□□ -1.1
TOP3B-210ENST00000444502 GFRA4Q9GZZ7 299 aa8.18□□□□□ -1.1
TOP3B-210ENST00000444502 CCL24O00175 119 aa8.18□□□□□ -1.1
TOP3B-210ENST00000444502 IGHV4-31P0DP07 118 aa8.18□□□□□ -1.1
TOP3B-210ENST00000444502 XGP55808 180 aa8.18□□□□□ -1.1
TOP3B-210ENST00000444502 LOXL1Q08397 574 aaPredicted RBP8.18□□□□□ -1.1
TOP3B-210ENST00000444502 CFHR3Q02985 330 aa8.17□□□□□ -1.1
TOP3B-210ENST00000444502 DLX4Q92988 240 aaPredicted RBP8.17□□□□□ -1.1
TOP3B-210ENST00000444502 SPATA25Q9BR10 227 aa8.17□□□□□ -1.1
TOP3B-210ENST00000444502 TRBV12-3P01733 135 aa8.17□□□□□ -1.1
TOP3B-210ENST00000444502 C19orf54Q5BKX5 351 aa8.17□□□□□ -1.1
TOP3B-210ENST00000444502 MUC3AQ02505 3323 aa8.17□□□□□ -1.1
TOP3B-210ENST00000444502 LOC400499M0QZD8 3231 aa8.17□□□□□ -1.1
TOP3B-210ENST00000444502 IGKV3D-20A0A0C4DH25 116 aa8.17□□□□□ -1.1
TOP3B-210ENST00000444502 EGR2P11161 476 aaPredicted RBP8.17□□□□□ -1.1
TOP3B-210ENST00000444502 RAI1Q7Z5J4 1906 aaPredicted RBP8.16□□□□□ -1.1
TOP3B-210ENST00000444502 CCDC179H3BU77 68 aa8.16□□□□□ -1.1
TOP3B-210ENST00000444502 PRAC2D3DTV9 90 aa8.16□□□□□ -1.1
TOP3B-210ENST00000444502 H7C1H1 209 aa8.16□□□□□ -1.1
TOP3B-210ENST00000444502 IFITM1P13164 125 aa8.16□□□□□ -1.1
TOP3B-210ENST00000444502 HERVK_113P61574 105 aa8.16□□□□□ -1.1
TOP3B-210ENST00000444502 C12orf74Q32Q52 190 aa8.16□□□□□ -1.1
TOP3B-210ENST00000444502 C10orf126Q8N4M7 172 aa8.16□□□□□ -1.1
TOP3B-210ENST00000444502 SMR3AQ99954 134 aa8.16□□□□□ -1.1
TOP3B-210ENST00000444502 KLF12Q9Y4X4 402 aa8.16□□□□□ -1.1
TOP3B-210ENST00000444502 IGHV7-4-1A0A0J9YVY3 117 aa8.16□□□□□ -1.1
TOP3B-210ENST00000444502 M0QXV9 152 aa8.16□□□□□ -1.1
TOP3B-210ENST00000444502 LY6LH3BQJ8 138 aa8.15□□□□□ -1.1
TOP3B-210ENST00000444502 CRXO43186 299 aaPredicted RBP8.15□□□□□ -1.1
TOP3B-210ENST00000444502 PRSS2P07478 247 aa8.15□□□□□ -1.1
TOP3B-210ENST00000444502 TMEM170BQ5T4T1 132 aa8.15□□□□□ -1.1
TOP3B-210ENST00000444502 FAM104BQ5XKR9 115 aa8.15□□□□□ -1.1
TOP3B-210ENST00000444502 MRPL51Q4U2R6 128 aaKnown RBP8.15□□□□□ -1.1
TOP3B-210ENST00000444502 MSRB1Q9NZV6 116 aa8.15□□□□□ -1.1
TOP3B-210ENST00000444502 PTPRBP23467 1997 aa8.15□□□□□ -1.1
TOP3B-210ENST00000444502 C10orf99Q6UWK7 81 aa8.15□□□□□ -1.11
TOP3B-210ENST00000444502 APRG1Q8IVJ8 170 aa8.15□□□□□ -1.11
TOP3B-210ENST00000444502 PPDPFLQ8WWR9 84 aa8.15□□□□□ -1.11
TOP3B-210ENST00000444502 AGPAT4-IT1Q9H0P7 198 aa8.15□□□□□ -1.11
TOP3B-210ENST00000444502 IGHV4OR15-8A0A075B7B6 117 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 A0A087WW49 117 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 DNAJC9-AS1A6NH13 148 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 LINC01549A6NIU2 74 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 IGKCP01834 107 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 SUMO2P61956 95 aaKnown RBP8.14□□□□□ -1.11
TOP3B-210ENST00000444502 ZNF876PQ49A33 203 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 CEND1Q8N111 149 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 FLNAP21333 2647 aaKnown RBP8.14□□□□□ -1.11
TOP3B-210ENST00000444502 ODF3BA8MYP8 253 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 LGALS1P09382 135 aaKnown RBP8.14□□□□□ -1.11
TOP3B-210ENST00000444502 URB1-AS1Q96HZ7 61 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 SCGB3A1Q96QR1 104 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 TRGV11A0A075B6L2 103 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 TRBV25-1A0A075B6N4 114 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 IGHV3-16A0A0C4DH30 117 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 WI2-2373I1.2A0A1W2PRP0 233 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 TSPAN13O95857 204 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 WIPF2Q8TF74 440 aaPredicted RBP8.14□□□□□ -1.11
TOP3B-210ENST00000444502 CITED2Q99967 270 aaPredicted RBP8.14□□□□□ -1.11
TOP3B-210ENST00000444502 ZNF415Q09FC8 603 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 UNQ9165/PRO28630Q6UXU0 137 aa8.14□□□□□ -1.11
TOP3B-210ENST00000444502 AVPP01185 164 aa8.13□□□□□ -1.11
TOP3B-210ENST00000444502 NPYP01303 97 aa8.13□□□□□ -1.11
TOP3B-210ENST00000444502 INSP01308 110 aa8.13□□□□□ -1.11
TOP3B-210ENST00000444502 IGHG2P01859 326 aa8.13□□□□□ -1.11
TOP3B-210ENST00000444502 MRAPQ8TCY5 172 aa8.13□□□□□ -1.11
TOP3B-210ENST00000444502 TOMM7Q9P0U1 55 aa8.13□□□□□ -1.11
TOP3B-210ENST00000444502 ITPR3Q14573 2671 aa8.13□□□□□ -1.11
TOP3B-210ENST00000444502 TRAV26-2A0A0B4J265 109 aa8.13□□□□□ -1.11
TOP3B-210ENST00000444502 BUB3O43684 328 aa8.13□□□□□ -1.11
TOP3B-210ENST00000444502 SIGLEC8Q9NYZ4 499 aa8.13□□□□□ -1.11
TOP3B-210ENST00000444502 GATA1P15976 413 aaPredicted RBP8.13□□□□□ -1.11
TOP3B-210ENST00000444502 MLST8Q9BVC4 326 aa8.13□□□□□ -1.11
TOP3B-210ENST00000444502 C19orf71A6NCJ1 209 aa8.12□□□□□ -1.11
TOP3B-210ENST00000444502 DPM2O94777 84 aa8.12□□□□□ -1.11
TOP3B-210ENST00000444502 NXT2Q9NPJ8 142 aaKnown RBP8.12□□□□□ -1.11
TOP3B-210ENST00000444502 C9JAW5 83 aa8.12□□□□□ -1.11
TOP3B-210ENST00000444502 TNFRSF6BO95407 300 aa8.12□□□□□ -1.11
TOP3B-210ENST00000444502 PHLDA1Q8WV24 401 aaPredicted RBP8.12□□□□□ -1.11
TOP3B-210ENST00000444502 TMEM158Q8WZ71 300 aa8.12□□□□□ -1.11
TOP3B-210ENST00000444502 MBD6Q96DN6 1003 aa8.12□□□□□ -1.11
TOP3B-210ENST00000444502 A6NDX4 124 aa8.12□□□□□ -1.11
TOP3B-210ENST00000444502 LGALS9BQ3B8N2 356 aa8.12□□□□□ -1.11
TOP3B-210ENST00000444502 LGALS9CQ6DKI2 356 aa8.12□□□□□ -1.11
TOP3B-210ENST00000444502 CHCHD5Q9BSY4 110 aa8.12□□□□□ -1.11
TOP3B-210ENST00000444502 ADGRG4Q8IZF6 3080 aa8.12□□□□□ -1.11
TOP3B-210ENST00000444502 RPL13AP40429 203 aaKnown RBP8.11□□□□□ -1.11
TOP3B-210ENST00000444502 TMEM190Q8WZ59 177 aa8.11□□□□□ -1.11
TOP3B-210ENST00000444502 FAM110AQ9BQ89 295 aa8.11□□□□□ -1.11
TOP3B-210ENST00000444502 DMXL2Q8TDJ6 3036 aa8.11□□□□□ -1.11
TOP3B-210ENST00000444502 ATP5LO75964 103 aa8.11□□□□□ -1.11
TOP3B-210ENST00000444502 MYCNOSP40205 109 aa8.11□□□□□ -1.11
TOP3B-210ENST00000444502 Q6ZS46 218 aa8.1□□□□□ -1.11
TOP3B-210ENST00000444502 TRAV8-4A0A0B4J246 113 aa8.1□□□□□ -1.11
TOP3B-210ENST00000444502 AGRNO00468 2067 aa8.1□□□□□ -1.11
TOP3B-210ENST00000444502 NDUFV3P56181 108 aaKnown RBP8.1□□□□□ -1.11
TOP3B-210ENST00000444502 DMXL1Q9Y485 3027 aa8.1□□□□□ -1.11
TOP3B-210ENST00000444502 IGKV2D-26A0A0A0MRZ7 120 aa8.1□□□□□ -1.11
TOP3B-210ENST00000444502 VWC2LB2RUY7 222 aa8.1□□□□□ -1.11
TOP3B-210ENST00000444502 ZNF80P51504 273 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms