RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 SMKR1H3BMG3 65 aa10.74□□□□□ -0.69
SMARCA4-204ENST00000444061 KIR2DL5AQ8N109 375 aa10.74□□□□□ -0.69
SMARCA4-204ENST00000444061 C11orf1Q9H5F2 150 aa10.74□□□□□ -0.69
SMARCA4-204ENST00000444061 IGLV1-40P01703 118 aa10.74□□□□□ -0.69
SMARCA4-204ENST00000444061 DEFB1P60022 68 aa10.74□□□□□ -0.69
SMARCA4-204ENST00000444061 C18orf32Q8TCD1 76 aa10.74□□□□□ -0.69
SMARCA4-204ENST00000444061 CHTOPQ9Y3Y2 248 aaKnown RBP10.73□□□□□ -0.69
SMARCA4-204ENST00000444061 PLNP26678 52 aa10.73□□□□□ -0.69
SMARCA4-204ENST00000444061 A0A0J9YX75 114 aa10.73□□□□□ -0.69
SMARCA4-204ENST00000444061 ATP5G1P05496 136 aa10.73□□□□□ -0.69
SMARCA4-204ENST00000444061 KLF5Q13887 457 aaPredicted RBP10.72□□□□□ -0.69
SMARCA4-204ENST00000444061 TRBV25-1A0A075B6N4 114 aa10.72□□□□□ -0.69
SMARCA4-204ENST00000444061 TRAV8-4A0A0B4J246 113 aa10.72□□□□□ -0.69
SMARCA4-204ENST00000444061 A0A0J9YY99 117 aa10.72□□□□□ -0.69
SMARCA4-204ENST00000444061 EGR2P11161 476 aaPredicted RBP10.72□□□□□ -0.69
SMARCA4-204ENST00000444061 RHOHQ15669 191 aa10.72□□□□□ -0.69
SMARCA4-204ENST00000444061 ZNF815PA8K554 130 aa10.72□□□□□ -0.69
SMARCA4-204ENST00000444061 C9orf47Q6ZRZ4 202 aa10.72□□□□□ -0.69
SMARCA4-204ENST00000444061 K7EQG2 157 aa10.71□□□□□ -0.69
SMARCA4-204ENST00000444061 HLA-DRB4P13762 266 aa10.71□□□□□ -0.69
SMARCA4-204ENST00000444061 HLA-DRB4X5D2U9 266 aa10.71□□□□□ -0.69
SMARCA4-204ENST00000444061 C9orf118A6NHY6 69 aa10.71□□□□□ -0.7
SMARCA4-204ENST00000444061 FAM104BQ5XKR9 115 aa10.71□□□□□ -0.7
SMARCA4-204ENST00000444061 C18orf65Q6ZTR6 163 aa10.71□□□□□ -0.7
SMARCA4-204ENST00000444061 GTSF1LQ9H1H1 148 aa10.71□□□□□ -0.7
SMARCA4-204ENST00000444061 A0A096LPF7 62 aa10.7□□□□□ -0.7
SMARCA4-204ENST00000444061 TNFRSF6BO95407 300 aa10.7□□□□□ -0.7
SMARCA4-204ENST00000444061 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.7□□□□□ -0.7
SMARCA4-204ENST00000444061 HCFC1P51610 2035 aa10.7□□□□□ -0.7
SMARCA4-204ENST00000444061 ZFAND3Q9H8U3 227 aa10.69□□□□□ -0.7
SMARCA4-204ENST00000444061 SDHAF1A6NFY7 115 aa10.69□□□□□ -0.7
SMARCA4-204ENST00000444061 V9GYV3 84 aa10.69□□□□□ -0.7
SMARCA4-204ENST00000444061 MAJINQ3KP22 176 aa10.69□□□□□ -0.7
SMARCA4-204ENST00000444061 C2CD3Q4AC94 2353 aa10.69□□□□□ -0.7
SMARCA4-204ENST00000444061 NACAE9PAV3 2078 aa10.68□□□□□ -0.7
SMARCA4-204ENST00000444061 DEFB4AO15263 64 aa10.68□□□□□ -0.7
SMARCA4-204ENST00000444061 ERG28Q9UKR5 140 aa10.68□□□□□ -0.7
SMARCA4-204ENST00000444061 ADAMTSL5Q6ZMM2 481 aa10.68□□□□□ -0.7
SMARCA4-204ENST00000444061 TRAV13-1A0A0B4J241 112 aa10.68□□□□□ -0.7
SMARCA4-204ENST00000444061 IGHV3-38A0A0C4DH36 116 aa10.68□□□□□ -0.7
SMARCA4-204ENST00000444061 SS18Q15532 418 aa10.68□□□□□ -0.7
SMARCA4-204ENST00000444061 TMEM243Q9BU79 118 aa10.68□□□□□ -0.7
SMARCA4-204ENST00000444061 HELZ2Q9BYK8 2649 aaKnown RBP10.68□□□□□ -0.7
SMARCA4-204ENST00000444061 CHAC1Q9BUX1 264 aa10.68□□□□□ -0.7
SMARCA4-204ENST00000444061 I3L3M4 83 aa10.67□□□□□ -0.7
SMARCA4-204ENST00000444061 SMIM27A0A1W2PRY6 76 aa10.67□□□□□ -0.7
SMARCA4-204ENST00000444061 K7EP34 96 aa10.67□□□□□ -0.7
SMARCA4-204ENST00000444061 K7EP13 123 aa10.67□□□□□ -0.7
SMARCA4-204ENST00000444061 SPRY2O43597 315 aa10.67□□□□□ -0.7
SMARCA4-204ENST00000444061 COX8AP10176 69 aa10.67□□□□□ -0.7
SMARCA4-204ENST00000444061 C16orf95Q9H693 158 aa10.67□□□□□ -0.7
SMARCA4-204ENST00000444061 TMEM238C9JI98 176 aa10.67□□□□□ -0.7
SMARCA4-204ENST00000444061 F8W1H4 67 aa10.66□□□□□ -0.7
SMARCA4-204ENST00000444061 Q8N1Y9 231 aa10.66□□□□□ -0.7
SMARCA4-204ENST00000444061 OR13C6PQ8NH95 151 aa10.66□□□□□ -0.7
SMARCA4-204ENST00000444061 NAA38Q9BRA0 125 aaKnown RBP10.66□□□□□ -0.7
SMARCA4-204ENST00000444061 SPANXDQ9BXN6 97 aa10.66□□□□□ -0.7
SMARCA4-204ENST00000444061 TRAV2A0A0B4J234 112 aa10.66□□□□□ -0.7
SMARCA4-204ENST00000444061 IL17DQ8TAD2 202 aa10.66□□□□□ -0.7
SMARCA4-204ENST00000444061 SPINK8P0C7L1 97 aa10.66□□□□□ -0.7
SMARCA4-204ENST00000444061 MRPL23Q16540 153 aaKnown RBP10.66□□□□□ -0.7
SMARCA4-204ENST00000444061 STPG4Q8N801 248 aa10.65□□□□□ -0.7
SMARCA4-204ENST00000444061 LINC00482Q8N8I6 264 aa10.65□□□□□ -0.7
SMARCA4-204ENST00000444061 TRAV26-2A0A0B4J265 109 aa10.65□□□□□ -0.7
SMARCA4-204ENST00000444061 H3BMM0 161 aa10.65□□□□□ -0.7
SMARCA4-204ENST00000444061 SIVA1O15304 175 aa10.65□□□□□ -0.7
SMARCA4-204ENST00000444061 GAGE6Q13070 117 aa10.65□□□□□ -0.7
SMARCA4-204ENST00000444061 ATXN8Q156A1 80 aa10.65□□□□□ -0.7
SMARCA4-204ENST00000444061 CCL18P55774 89 aa10.65□□□□□ -0.7
SMARCA4-204ENST00000444061 MRPL51Q4U2R6 128 aaKnown RBP10.65□□□□□ -0.71
SMARCA4-204ENST00000444061 TANC2Q9HCD6 1990 aa10.64□□□□□ -0.71
SMARCA4-204ENST00000444061 OXLD1Q5BKU9 147 aa10.64□□□□□ -0.71
SMARCA4-204ENST00000444061 ZC2HC1BQ5TFG8 222 aa10.64□□□□□ -0.71
SMARCA4-204ENST00000444061 KLK5Q9Y337 293 aaPredicted RBP10.64□□□□□ -0.71
SMARCA4-204ENST00000444061 LGALS9BQ3B8N2 356 aa10.64□□□□□ -0.71
SMARCA4-204ENST00000444061 LGALS9CQ6DKI2 356 aa10.64□□□□□ -0.71
SMARCA4-204ENST00000444061 SPATA25Q9BR10 227 aa10.64□□□□□ -0.71
SMARCA4-204ENST00000444061 CRIP2P52943 208 aaPredicted RBP10.64□□□□□ -0.71
SMARCA4-204ENST00000444061 RMI2Q96E14 147 aa10.64□□□□□ -0.71
SMARCA4-204ENST00000444061 K7EN84 100 aa10.63□□□□□ -0.71
SMARCA4-204ENST00000444061 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
SMARCA4-204ENST00000444061 ESM1Q9NQ30 184 aa10.63□□□□□ -0.71
SMARCA4-204ENST00000444061 PLA2G2EQ9NZK7 142 aa10.63□□□□□ -0.71
SMARCA4-204ENST00000444061 ICOSQ9Y6W8 199 aa10.63□□□□□ -0.71
SMARCA4-204ENST00000444061 CDPF1Q6NVV7 123 aa10.63□□□□□ -0.71
SMARCA4-204ENST00000444061 TMEM263Q8WUH6 116 aaKnown RBP10.63□□□□□ -0.71
SMARCA4-204ENST00000444061 TRBV20-1A0A075B6N2 111 aa10.63□□□□□ -0.71
SMARCA4-204ENST00000444061 GYPEP15421 78 aa10.63□□□□□ -0.71
SMARCA4-204ENST00000444061 BVES-AS1Q5T3Y7 98 aa10.63□□□□□ -0.71
SMARCA4-204ENST00000444061 KLF12Q9Y4X4 402 aa10.62□□□□□ -0.71
SMARCA4-204ENST00000444061 TRBV7-9A0A0J9YWB2 115 aa10.62□□□□□ -0.71
SMARCA4-204ENST00000444061 TAL2Q16559 108 aa10.62□□□□□ -0.71
SMARCA4-204ENST00000444061 ZNF503Q96F45 646 aa10.62□□□□□ -0.71
SMARCA4-204ENST00000444061 ZNF580Q9UK33 172 aa10.62□□□□□ -0.71
SMARCA4-204ENST00000444061 SFTA2Q6UW10 78 aa10.62□□□□□ -0.71
SMARCA4-204ENST00000444061 IGHV1-24A0A0C4DH33 117 aa10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 SH2D6Q7Z4S9 175 aa10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 C11orf68Q9H3H3 251 aaKnown RBP10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 PGPEP1Q9NXJ5 209 aa10.61□□□□□ -0.71
SMARCA4-204ENST00000444061 TP53TG1Q9Y2A0 90 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms