RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 SPCS1Q9Y6A9 102 aa2.57□□□□□ -2
VPS50-206ENST00000443443 HEATR5AQ86XA9 2040 aa2.57□□□□□ -2
VPS50-206ENST00000443443 SMARCA4P51532 1647 aa2.57□□□□□ -2
VPS50-206ENST00000443443 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.56□□□□□ -2
VPS50-206ENST00000443443 P0C880 135 aa2.56□□□□□ -2
VPS50-206ENST00000443443 IGFBP7Q16270 282 aa2.56□□□□□ -2
VPS50-206ENST00000443443 CDC42SE1Q9NRR8 79 aa2.56□□□□□ -2
VPS50-206ENST00000443443 C22orf24Q9Y442 160 aa2.56□□□□□ -2
VPS50-206ENST00000443443 CDK12Q9NYV4 1490 aaPredicted RBP2.56□□□□□ -2
VPS50-206ENST00000443443 TOPAZ1Q8N9V7 1692 aa2.56□□□□□ -2
VPS50-206ENST00000443443 COL24A1Q17RW2 1714 aa2.56□□□□□ -2
VPS50-206ENST00000443443 MYLKQ15746 1914 aa2.56□□□□□ -2
VPS50-206ENST00000443443 TRBV7-1A0A0A6YYK4 115 aa2.55□□□□□ -2
VPS50-206ENST00000443443 CCL16O15467 120 aa2.55□□□□□ -2
VPS50-206ENST00000443443 IGHV3-33P01772 117 aa2.55□□□□□ -2
VPS50-206ENST00000443443 COL1A2P08123 1366 aa2.55□□□□□ -2
VPS50-206ENST00000443443 POLA1P09884 1462 aaPredicted RBP2.55□□□□□ -2
VPS50-206ENST00000443443 C1orf137Q5JT78 98 aa2.55□□□□□ -2
VPS50-206ENST00000443443 MALRD1Q5VYJ5 2156 aa2.55□□□□□ -2
VPS50-206ENST00000443443 KRTAP26-1Q6PEX3 210 aa2.55□□□□□ -2
VPS50-206ENST00000443443 LYPD5Q6UWN5 251 aa2.55□□□□□ -2
VPS50-206ENST00000443443 PXDNQ92626 1479 aa2.55□□□□□ -2
VPS50-206ENST00000443443 NXT2Q9NPJ8 142 aaKnown RBP2.55□□□□□ -2
VPS50-206ENST00000443443 ORMDL1Q9P0S3 153 aa2.55□□□□□ -2
VPS50-206ENST00000443443 CCL26Q9Y258 94 aa2.55□□□□□ -2
VPS50-206ENST00000443443 HIVEP2P31629 2446 aa2.54□□□□□ -2
VPS50-206ENST00000443443 TNRC6AQ8NDV7 1962 aaKnown RBP2.54□□□□□ -2
VPS50-206ENST00000443443 CPAMD8Q8IZJ3 1885 aa2.54□□□□□ -2
VPS50-206ENST00000443443 LRP5O75197 1615 aa2.54□□□□□ -2
VPS50-206ENST00000443443 TRBV10-1A0A0K0K1A3 114 aa2.54□□□□□ -2
VPS50-206ENST00000443443 CXorf51AA0A1B0GTR3 108 aa2.54□□□□□ -2
VPS50-206ENST00000443443 LRCOL1A6NCL2 159 aa2.54□□□□□ -2
VPS50-206ENST00000443443 SYS1-DBNDD2H3BUS1 97 aa2.54□□□□□ -2
VPS50-206ENST00000443443 SIX6O95475 246 aa2.54□□□□□ -2
VPS50-206ENST00000443443 MANBALQ9NQG1 85 aa2.54□□□□□ -2
VPS50-206ENST00000443443 TRPM6Q9BX84 2022 aa2.54□□□□□ -2
VPS50-206ENST00000443443 SLIT2O94813 1529 aa2.53□□□□□ -2
VPS50-206ENST00000443443 PTPRMP28827 1452 aa2.53□□□□□ -2
VPS50-206ENST00000443443 CCDC88CQ9P219 2028 aa2.53□□□□□ -2
VPS50-206ENST00000443443 TRAV23DV6A0A075B6W5 121 aa2.53□□□□□ -2
VPS50-206ENST00000443443 TRAV12-3A0A0B4J271 114 aa2.53□□□□□ -2
VPS50-206ENST00000443443 A0A1W2PPM0 123 aa2.53□□□□□ -2
VPS50-206ENST00000443443 TFF1P04155 84 aa2.53□□□□□ -2
VPS50-206ENST00000443443 CYP2G1PQ6ZSU1 146 aa2.53□□□□□ -2
VPS50-206ENST00000443443 S100ZQ8WXG8 99 aa2.53□□□□□ -2
VPS50-206ENST00000443443 IFI27L1Q96BM0 104 aa2.53□□□□□ -2
VPS50-206ENST00000443443 TIMM21Q9BVV7 248 aa2.53□□□□□ -2
VPS50-206ENST00000443443 CASZ1Q86V15 1759 aa2.53□□□□□ -2
VPS50-206ENST00000443443 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2.01
VPS50-206ENST00000443443 EPRSP07814 1512 aaKnown RBP2.52□□□□□ -2.01
VPS50-206ENST00000443443 SBF2Q86WG5 1849 aa2.52□□□□□ -2.01
VPS50-206ENST00000443443 MON2Q7Z3U7 1717 aa2.52□□□□□ -2.01
VPS50-206ENST00000443443 KANTRA0A1W2PQU2 76 aa2.52□□□□□ -2.01
VPS50-206ENST00000443443 CNBPP62633 177 aaKnown RBP2.52□□□□□ -2.01
VPS50-206ENST00000443443 ETDBQ3ZM63 59 aa2.52□□□□□ -2.01
VPS50-206ENST00000443443 Q5BKY6 102 aa2.52□□□□□ -2.01
VPS50-206ENST00000443443 CSAG1Q6PB30 78 aa2.52□□□□□ -2.01
VPS50-206ENST00000443443 ZNF818PQ6ZRF7 136 aa2.52□□□□□ -2.01
VPS50-206ENST00000443443 DMAC1Q96GE9 116 aa2.52□□□□□ -2.01
VPS50-206ENST00000443443 EDC4Q6P2E9 1401 aaKnown RBP2.51□□□□□ -2.01
VPS50-206ENST00000443443 TNS1Q9HBL0 1735 aaKnown RBP2.51□□□□□ -2.01
VPS50-206ENST00000443443 KDM6BO15054 1643 aa2.51□□□□□ -2.01
VPS50-206ENST00000443443 IGLC2P0DOY2 106 aa2.51□□□□□ -2.01
VPS50-206ENST00000443443 IGLC3P0DOY3 106 aa2.51□□□□□ -2.01
VPS50-206ENST00000443443 SMIM11AP58511 58 aa2.51□□□□□ -2.01
VPS50-206ENST00000443443 C10orf128Q5T292 105 aa2.51□□□□□ -2.01
VPS50-206ENST00000443443 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
VPS50-206ENST00000443443 MRPL36Q9P0J6 103 aaKnown RBP2.51□□□□□ -2.01
VPS50-206ENST00000443443 ADAMTS12P58397 1594 aa2.51□□□□□ -2.01
VPS50-206ENST00000443443 SLIT3O75094 1523 aa2.51□□□□□ -2.01
VPS50-206ENST00000443443 ATP10BO94823 1461 aa2.51□□□□□ -2.01
VPS50-206ENST00000443443 NLRP1Q9C000 1473 aa2.51□□□□□ -2.01
VPS50-206ENST00000443443 MLH3Q9UHC1 1453 aa2.51□□□□□ -2.01
VPS50-206ENST00000443443 SCN3AQ9NY46 2000 aa2.51□□□□□ -2.01
VPS50-206ENST00000443443 ANKARQ7Z5J8 1434 aa2.51□□□□□ -2.01
VPS50-206ENST00000443443 PARP14Q460N5 1801 aa2.5□□□□□ -2.01
VPS50-206ENST00000443443 TRBV6-8A0A0A6YYG3 113 aa2.5□□□□□ -2.01
VPS50-206ENST00000443443 CFDP00746 253 aaPredicted RBP2.5□□□□□ -2.01
VPS50-206ENST00000443443 FAM167A-AS1Q96KT0 104 aa2.5□□□□□ -2.01
VPS50-206ENST00000443443 AMELYQ99218 206 aa2.5□□□□□ -2.01
VPS50-206ENST00000443443 PRO1854Q9UHT4 67 aa2.5□□□□□ -2.01
VPS50-206ENST00000443443 SHANK2Q9UPX8 1470 aa2.5□□□□□ -2.01
VPS50-206ENST00000443443 DOCK1Q14185 1865 aa2.5□□□□□ -2.01
VPS50-206ENST00000443443 KIAA1549LQ6ZVL6 1849 aa2.49□□□□□ -2.01
VPS50-206ENST00000443443 STRCQ7RTU9 1775 aa2.49□□□□□ -2.01
VPS50-206ENST00000443443 DISP1Q96F81 1524 aa2.49□□□□□ -2.01
VPS50-206ENST00000443443 TRBV7-3A0A075B6L6 115 aa2.49□□□□□ -2.01
VPS50-206ENST00000443443 A0A0G2JND7 137 aa2.49□□□□□ -2.01
VPS50-206ENST00000443443 A0A0G2JQZ4 141 aa2.49□□□□□ -2.01
VPS50-206ENST00000443443 NUPR2A6NF83 97 aa2.49□□□□□ -2.01
VPS50-206ENST00000443443 IGLV6-57P01721 117 aa2.49□□□□□ -2.01
VPS50-206ENST00000443443 MOBPQ13875 183 aa2.49□□□□□ -2.01
VPS50-206ENST00000443443 HMGN3Q15651 99 aa2.49□□□□□ -2.01
VPS50-206ENST00000443443 NMSQ5H8A3 153 aa2.49□□□□□ -2.01
VPS50-206ENST00000443443 BVES-AS1Q5T3Y7 98 aa2.49□□□□□ -2.01
VPS50-206ENST00000443443 ZSWIM8A7E2V4 1837 aa2.49□□□□□ -2.01
VPS50-206ENST00000443443 PPLO60437 1756 aa2.49□□□□□ -2.01
VPS50-206ENST00000443443 SUPT6HQ7KZ85 1726 aaKnown RBP2.48□□□□□ -2.01
VPS50-206ENST00000443443 FANCAO15360 1455 aa2.48□□□□□ -2.01
VPS50-206ENST00000443443 CHD3Q12873 2000 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms