RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 SPANXN1Q5VSR9 72 aa12.42□□□□□ -0.42
CPSF4-205ENST00000440514 Q6ZR54 194 aa12.42□□□□□ -0.42
CPSF4-205ENST00000440514 FAM231DQ6ZW35 169 aa12.42□□□□□ -0.42
CPSF4-205ENST00000440514 PRADC1Q9BSG0 188 aa12.42□□□□□ -0.42
CPSF4-205ENST00000440514 UPK3BQ9BT76 320 aa12.42□□□□□ -0.42
CPSF4-205ENST00000440514 IGLC6P0CF74 106 aa12.41□□□□□ -0.42
CPSF4-205ENST00000440514 CACNG7P62955 275 aa12.41□□□□□ -0.42
CPSF4-205ENST00000440514 TMEM241Q24JQ0 296 aa12.41□□□□□ -0.42
CPSF4-205ENST00000440514 NUDT10Q8NFP7 164 aa12.41□□□□□ -0.42
CPSF4-205ENST00000440514 NUDT11Q96G61 164 aa12.41□□□□□ -0.42
CPSF4-205ENST00000440514 TPPP3Q9BW30 176 aa12.41□□□□□ -0.42
CPSF4-205ENST00000440514 RNASE7Q9H1E1 156 aaKnown RBP12.41□□□□□ -0.42
CPSF4-205ENST00000440514 DNAH10Q8IVF4 4471 aa12.4□□□□□ -0.42
CPSF4-205ENST00000440514 CRYGDP07320 174 aa12.4□□□□□ -0.42
CPSF4-205ENST00000440514 ERVFC1-1P60608 527 aa12.4□□□□□ -0.42
CPSF4-205ENST00000440514 SSTP61278 116 aa12.4□□□□□ -0.42
CPSF4-205ENST00000440514 CT83Q5H943 113 aa12.4□□□□□ -0.42
CPSF4-205ENST00000440514 SOHLH1Q5JUK2 328 aa12.4□□□□□ -0.42
CPSF4-205ENST00000440514 WDR73Q6P4I2 378 aa12.4□□□□□ -0.42
CPSF4-205ENST00000440514 LYPD5Q6UWN5 251 aa12.4□□□□□ -0.42
CPSF4-205ENST00000440514 FER1L6-AS1Q8NA97 138 aa12.4□□□□□ -0.42
CPSF4-205ENST00000440514 RPP21Q9H633 154 aaKnown RBP12.4□□□□□ -0.42
CPSF4-205ENST00000440514 NBDYA0A0U1RRE5 68 aa12.39□□□□□ -0.43
CPSF4-205ENST00000440514 A8MWL6 223 aa12.39□□□□□ -0.43
CPSF4-205ENST00000440514 SRSF3P84103 164 aaKnown RBP12.39□□□□□ -0.43
CPSF4-205ENST00000440514 C14orf178Q8N769 122 aaPredicted RBP12.39□□□□□ -0.43
CPSF4-205ENST00000440514 C15orf54Q8N8G6 183 aa12.39□□□□□ -0.43
CPSF4-205ENST00000440514 Q9H8V8 135 aa12.39□□□□□ -0.43
CPSF4-205ENST00000440514 NAT8Q9UHE5 227 aa12.39□□□□□ -0.43
CPSF4-205ENST00000440514 EPPK1P58107 5090 aaKnown RBP12.38□□□□□ -0.43
CPSF4-205ENST00000440514 C9JQL5 133 aa12.38□□□□□ -0.43
CPSF4-205ENST00000440514 GATCO43716 136 aaKnown RBP12.38□□□□□ -0.43
CPSF4-205ENST00000440514 SMIM17P0DL12 118 aa12.38□□□□□ -0.43
CPSF4-205ENST00000440514 LINC01551Q86U37 167 aa12.38□□□□□ -0.43
CPSF4-205ENST00000440514 AP1S3Q96PC3 154 aa12.37□□□□□ -0.43
CPSF4-205ENST00000440514 KRTAP1-5Q9BYS1 174 aa12.37□□□□□ -0.43
CPSF4-205ENST00000440514 Q9UF83 564 aa12.37□□□□□ -0.43
CPSF4-205ENST00000440514 FAM231BA6NCW3 169 aa12.36□□□□□ -0.43
CPSF4-205ENST00000440514 GAGE12JA6NER3 117 aa12.36□□□□□ -0.43
CPSF4-205ENST00000440514 GAGE1Q13065 139 aa12.36□□□□□ -0.43
CPSF4-205ENST00000440514 GAGE4Q13068 117 aa12.36□□□□□ -0.43
CPSF4-205ENST00000440514 GAGE5Q13069 117 aa12.36□□□□□ -0.43
CPSF4-205ENST00000440514 GAGE13Q4V321 117 aa12.36□□□□□ -0.43
CPSF4-205ENST00000440514 BORCS7Q96B45 105 aa12.36□□□□□ -0.43
CPSF4-205ENST00000440514 OSTCQ9NRP0 149 aa12.36□□□□□ -0.43
CPSF4-205ENST00000440514 FRAS1Q86XX4 4008 aa12.35□□□□□ -0.43
CPSF4-205ENST00000440514 RTL8CO15255 209 aa12.35□□□□□ -0.43
CPSF4-205ENST00000440514 TRGC1P0CF51 173 aa12.35□□□□□ -0.43
CPSF4-205ENST00000440514 LINC00694P0DN24 101 aa12.35□□□□□ -0.43
CPSF4-205ENST00000440514 ZNF56Q15929 161 aa12.35□□□□□ -0.43
CPSF4-205ENST00000440514 UQCC3Q6UW78 93 aa12.35□□□□□ -0.43
CPSF4-205ENST00000440514 LYZL1Q6UWQ5 148 aa12.35□□□□□ -0.43
CPSF4-205ENST00000440514 WFDC10BQ8IUB3 73 aa12.35□□□□□ -0.43
CPSF4-205ENST00000440514 GFRA4Q9GZZ7 299 aa12.35□□□□□ -0.43
CPSF4-205ENST00000440514 MSRB1Q9NZV6 116 aa12.35□□□□□ -0.43
CPSF4-205ENST00000440514 DNAH2Q9P225 4427 aa12.35□□□□□ -0.43
CPSF4-205ENST00000440514 SIVA1O15304 175 aa12.34□□□□□ -0.43
CPSF4-205ENST00000440514 SMIM15Q7Z3B0 74 aa12.34□□□□□ -0.43
CPSF4-205ENST00000440514 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-205ENST00000440514 TRBV10-1A0A0K0K1A3 114 aa12.33□□□□□ -0.44
CPSF4-205ENST00000440514 CTRLP40313 264 aa12.33□□□□□ -0.44
CPSF4-205ENST00000440514 FOXA3P55318 350 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-205ENST00000440514 RAB4BP61018 213 aa12.33□□□□□ -0.44
CPSF4-205ENST00000440514 TTC32Q5I0X7 151 aa12.33□□□□□ -0.44
CPSF4-205ENST00000440514 TIRAPP58753 221 aa12.32□□□□□ -0.44
CPSF4-205ENST00000440514 PNRC1Q12796 327 aaPredicted RBP12.32□□□□□ -0.44
CPSF4-205ENST00000440514 C1orf134Q5TEV5 83 aa12.32□□□□□ -0.44
CPSF4-205ENST00000440514 ATP6V0E2Q8NHE4 81 aa12.32□□□□□ -0.44
CPSF4-205ENST00000440514 TSKUQ8WUA8 353 aa12.32□□□□□ -0.44
CPSF4-205ENST00000440514 GTSF1Q8WW33 167 aa12.32□□□□□ -0.44
CPSF4-205ENST00000440514 CNFNQ9BYD5 112 aa12.32□□□□□ -0.44
CPSF4-205ENST00000440514 KIF25-AS1Q9Y6Z4 181 aa12.32□□□□□ -0.44
CPSF4-205ENST00000440514 H7C1H1 209 aa12.31□□□□□ -0.44
CPSF4-205ENST00000440514 K7EP13 123 aa12.31□□□□□ -0.44
CPSF4-205ENST00000440514 ADIRFQ15847 76 aa12.31□□□□□ -0.44
CPSF4-205ENST00000440514 MGPP08493 103 aa12.3□□□□□ -0.44
CPSF4-205ENST00000440514 LINC00315P59091 139 aa12.3□□□□□ -0.44
CPSF4-205ENST00000440514 RPL23P62829 140 aaKnown RBP12.3□□□□□ -0.44
CPSF4-205ENST00000440514 IFITM2Q01629 132 aa12.3□□□□□ -0.44
CPSF4-205ENST00000440514 C6orf223Q8N319 242 aa12.3□□□□□ -0.44
CPSF4-205ENST00000440514 OR10G8Q8NGN5 311 aa12.3□□□□□ -0.44
CPSF4-205ENST00000440514 ISOC2Q96AB3 205 aa12.3□□□□□ -0.44
CPSF4-205ENST00000440514 GTSF1LQ9H1H1 148 aa12.3□□□□□ -0.44
CPSF4-205ENST00000440514 FAT2Q9NYQ8 4349 aa12.29□□□□□ -0.44
CPSF4-205ENST00000440514 F5H697 171 aa12.29□□□□□ -0.44
CPSF4-205ENST00000440514 PPP1R2P9O14990 202 aa12.29□□□□□ -0.44
CPSF4-205ENST00000440514 TWIST1Q15672 202 aa12.29□□□□□ -0.44
CPSF4-205ENST00000440514 LINC00336Q6ZUF6 198 aa12.29□□□□□ -0.44
CPSF4-205ENST00000440514 TRAV9-2A0A087WT02 112 aa12.28□□□□□ -0.44
CPSF4-205ENST00000440514 A0A087WWC5 75 aa12.28□□□□□ -0.44
CPSF4-205ENST00000440514 BTF3P20290 206 aaKnown RBP12.28□□□□□ -0.44
CPSF4-205ENST00000440514 NTF3P20783 257 aa12.28□□□□□ -0.44
CPSF4-205ENST00000440514 EVI2AP22794 236 aa12.28□□□□□ -0.44
CPSF4-205ENST00000440514 RPL36AP83881 106 aaKnown RBP12.28□□□□□ -0.44
CPSF4-205ENST00000440514 OR10J3Q5JRS4 329 aa12.28□□□□□ -0.44
CPSF4-205ENST00000440514 RPL36ALQ969Q0 106 aaKnown RBP12.28□□□□□ -0.44
CPSF4-205ENST00000440514 PRSS29PA6NIE9 313 aa12.27□□□□□ -0.45
CPSF4-205ENST00000440514 LELP1Q5T871 98 aa12.27□□□□□ -0.45
CPSF4-205ENST00000440514 NEXN-AS1Q8NBZ9 246 aa12.27□□□□□ -0.45
CPSF4-205ENST00000440514 DPH3P1Q9H4G8 78 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms