RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 MED9Q9NWA0 146 aa9.32□□□□□ -0.92
LTBR-202ENST00000440421 VAX2Q9UIW0 290 aa9.32□□□□□ -0.92
LTBR-202ENST00000440421 TRAV8-6A0A0B4J262 113 aa9.31□□□□□ -0.92
LTBR-202ENST00000440421 IGHV3-38A0A0C4DH36 116 aa9.31□□□□□ -0.92
LTBR-202ENST00000440421 C16orf90A8MZG2 172 aa9.31□□□□□ -0.92
LTBR-202ENST00000440421 PDE6DO43924 150 aa9.31□□□□□ -0.92
LTBR-202ENST00000440421 IGLV2-8P01709 118 aa9.31□□□□□ -0.92
LTBR-202ENST00000440421 CRYGDP07320 174 aa9.31□□□□□ -0.92
LTBR-202ENST00000440421 MED14OSP0DP75 135 aa9.31□□□□□ -0.92
LTBR-202ENST00000440421 NKX2-5P52952 324 aaPredicted RBP9.31□□□□□ -0.92
LTBR-202ENST00000440421 SSTP61278 116 aa9.31□□□□□ -0.92
LTBR-202ENST00000440421 GTSF1LQ9H1H1 148 aa9.31□□□□□ -0.92
LTBR-202ENST00000440421 CXCL1P09341 107 aa9.3□□□□□ -0.92
LTBR-202ENST00000440421 GNG4P50150 75 aa9.3□□□□□ -0.92
LTBR-202ENST00000440421 LELP1Q5T871 98 aa9.3□□□□□ -0.92
LTBR-202ENST00000440421 SPATA12Q7Z6I5 190 aa9.3□□□□□ -0.92
LTBR-202ENST00000440421 DAZAP1Q96EP5 407 aaKnown RBP9.3□□□□□ -0.92
LTBR-202ENST00000440421 MSRB1Q9NZV6 116 aa9.3□□□□□ -0.92
LTBR-202ENST00000440421 PKHD1P08F94 4074 aa9.3□□□□□ -0.92
LTBR-202ENST00000440421 K7EP13 123 aa9.29□□□□□ -0.92
LTBR-202ENST00000440421 SNAI2O43623 268 aa9.29□□□□□ -0.92
LTBR-202ENST00000440421 IGHV3-30P01768 117 aa9.29□□□□□ -0.92
LTBR-202ENST00000440421 IGHV3-33P01772 117 aa9.29□□□□□ -0.92
LTBR-202ENST00000440421 LINC00694P0DN24 101 aa9.29□□□□□ -0.92
LTBR-202ENST00000440421 IGHV3-30-3P0DP02 117 aa9.29□□□□□ -0.92
LTBR-202ENST00000440421 IGHV3-30-5P0DP03 117 aa9.29□□□□□ -0.92
LTBR-202ENST00000440421 GZMBP10144 247 aa9.29□□□□□ -0.92
LTBR-202ENST00000440421 SPANXN1Q5VSR9 72 aa9.29□□□□□ -0.92
LTBR-202ENST00000440421 NFE4Q86UQ8 179 aa9.29□□□□□ -0.92
LTBR-202ENST00000440421 SSBP4Q9BWG4 385 aaPredicted RBP9.29□□□□□ -0.92
LTBR-202ENST00000440421 BOLA1Q9Y3E2 137 aa9.29□□□□□ -0.92
LTBR-202ENST00000440421 TRBV20OR9-2A0A075B6H5 130 aa9.28□□□□□ -0.92
LTBR-202ENST00000440421 OR5AL1P0C617 328 aa9.28□□□□□ -0.92
LTBR-202ENST00000440421 TAGLN2P37802 199 aaKnown RBP9.28□□□□□ -0.92
LTBR-202ENST00000440421 KRTAP10-2P60368 255 aa9.28□□□□□ -0.92
LTBR-202ENST00000440421 LINC01556Q5JQF7 62 aa9.28□□□□□ -0.92
LTBR-202ENST00000440421 C10orf126Q8N4M7 172 aa9.28□□□□□ -0.92
LTBR-202ENST00000440421 OR2D3Q8NGH3 330 aa9.28□□□□□ -0.92
LTBR-202ENST00000440421 TPPP3Q9BW30 176 aa9.28□□□□□ -0.92
LTBR-202ENST00000440421 KIAA1109Q2LD37 5005 aa9.27□□□□□ -0.93
LTBR-202ENST00000440421 C19orf71A6NCJ1 209 aa9.27□□□□□ -0.93
LTBR-202ENST00000440421 BLOC1S1P78537 153 aa9.27□□□□□ -0.93
LTBR-202ENST00000440421 ZNF56Q15929 161 aa9.27□□□□□ -0.93
LTBR-202ENST00000440421 SMIM12Q96EX1 92 aa9.27□□□□□ -0.93
LTBR-202ENST00000440421 DYNC1H1Q14204 4646 aaKnown RBP9.27□□□□□ -0.93
LTBR-202ENST00000440421 RBFOX3A6NFN3 312 aa9.26□□□□□ -0.93
LTBR-202ENST00000440421 P01737 135 aa9.26□□□□□ -0.93
LTBR-202ENST00000440421 ERVFC1-1P60608 527 aa9.26□□□□□ -0.93
LTBR-202ENST00000440421 RPS20P60866 119 aaKnown RBP9.26□□□□□ -0.93
LTBR-202ENST00000440421 Q8N3U1 123 aa9.26□□□□□ -0.93
LTBR-202ENST00000440421 FER1L6-AS1Q8NA97 138 aa9.26□□□□□ -0.93
LTBR-202ENST00000440421 Q9HAA7 133 aa9.26□□□□□ -0.93
LTBR-202ENST00000440421 DNAH11Q96DT5 4516 aa9.25□□□□□ -0.93
LTBR-202ENST00000440421 IBA57-AS1B1ANH7 110 aa9.25□□□□□ -0.93
LTBR-202ENST00000440421 F5H697 171 aa9.25□□□□□ -0.93
LTBR-202ENST00000440421 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
LTBR-202ENST00000440421 RAB4BP61018 213 aa9.25□□□□□ -0.93
LTBR-202ENST00000440421 RPL36AP83881 106 aaKnown RBP9.25□□□□□ -0.93
LTBR-202ENST00000440421 RPL36ALQ969Q0 106 aaKnown RBP9.25□□□□□ -0.93
LTBR-202ENST00000440421 HERC2O95714 4834 aa9.25□□□□□ -0.93
LTBR-202ENST00000440421 A0A087WWC5 75 aa9.24□□□□□ -0.93
LTBR-202ENST00000440421 TRBV10-1A0A0K0K1A3 114 aa9.24□□□□□ -0.93
LTBR-202ENST00000440421 EREGO14944 169 aa9.24□□□□□ -0.93
LTBR-202ENST00000440421 IGLC6P0CF74 106 aa9.24□□□□□ -0.93
LTBR-202ENST00000440421 BIN3Q9NQY0 253 aa9.24□□□□□ -0.93
LTBR-202ENST00000440421 TRBV7-3A0A075B6L6 115 aa9.23□□□□□ -0.93
LTBR-202ENST00000440421 A0A087WTM6 91 aa9.23□□□□□ -0.93
LTBR-202ENST00000440421 XKRY2A2RUG3 117 aa9.23□□□□□ -0.93
LTBR-202ENST00000440421 PSCAO43653 123 aa9.23□□□□□ -0.93
LTBR-202ENST00000440421 SMIM17P0DL12 118 aa9.23□□□□□ -0.93
LTBR-202ENST00000440421 CEBPGP53567 150 aa9.23□□□□□ -0.93
LTBR-202ENST00000440421 NUDT10Q8NFP7 164 aa9.23□□□□□ -0.93
LTBR-202ENST00000440421 LYPD6BQ8NI32 183 aa9.23□□□□□ -0.93
LTBR-202ENST00000440421 OCC1Q8TAD7 63 aa9.23□□□□□ -0.93
LTBR-202ENST00000440421 NUDT11Q96G61 164 aa9.23□□□□□ -0.93
LTBR-202ENST00000440421 AP1S3Q96PC3 154 aa9.23□□□□□ -0.93
LTBR-202ENST00000440421 K7EN84 100 aa9.22□□□□□ -0.93
LTBR-202ENST00000440421 MGPP08493 103 aa9.22□□□□□ -0.93
LTBR-202ENST00000440421 UBE2D3P61077 147 aa9.22□□□□□ -0.93
LTBR-202ENST00000440421 UBE2D2P62837 147 aa9.22□□□□□ -0.93
LTBR-202ENST00000440421 TOR2AQ5JU69 321 aa9.22□□□□□ -0.93
LTBR-202ENST00000440421 DAZ4Q86SG3 579 aaKnown RBP9.22□□□□□ -0.93
LTBR-202ENST00000440421 NEXN-AS1Q8NBZ9 246 aa9.22□□□□□ -0.93
LTBR-202ENST00000440421 RNASE7Q9H1E1 156 aaKnown RBP9.22□□□□□ -0.93
LTBR-202ENST00000440421 DAZ3Q9NR90 486 aaKnown RBP9.22□□□□□ -0.93
LTBR-202ENST00000440421 KIF25-AS1Q9Y6Z4 181 aa9.22□□□□□ -0.93
LTBR-202ENST00000440421 TMEM250H0YL14 139 aa9.21□□□□□ -0.94
LTBR-202ENST00000440421 CACNG7P62955 275 aa9.21□□□□□ -0.94
LTBR-202ENST00000440421 LYZL1Q6UWQ5 148 aa9.21□□□□□ -0.94
LTBR-202ENST00000440421 OR10G8Q8NGN5 311 aa9.21□□□□□ -0.94
LTBR-202ENST00000440421 EIF5A2Q9GZV4 153 aaKnown RBP9.21□□□□□ -0.94
LTBR-202ENST00000440421 URGCP-MRPS24S4R325 110 aa9.21□□□□□ -0.94
LTBR-202ENST00000440421 F2Z2F3 143 aa9.2□□□□□ -0.94
LTBR-202ENST00000440421 RPP21Q9H633 154 aaKnown RBP9.2□□□□□ -0.94
LTBR-202ENST00000440421 PGPEP1Q9NXJ5 209 aa9.2□□□□□ -0.94
LTBR-202ENST00000440421 NTF3P20783 257 aa9.19□□□□□ -0.94
LTBR-202ENST00000440421 LAGE3Q14657 143 aa9.19□□□□□ -0.94
LTBR-202ENST00000440421 NIT1Q86X76 327 aa9.19□□□□□ -0.94
LTBR-202ENST00000440421 CDK2AP2O75956 126 aa9.18□□□□□ -0.94
LTBR-202ENST00000440421 FAM210AQ96ND0 272 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms