RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 MINOS1-NBL1R4GNA1 71 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 IGSF10Q6WRI0 2623 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 ODF3BA8MYP8 253 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 F8VRH5 84 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 Q6ZSV7 163 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 C11orf44Q8N8P7 122 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 DAND5Q8N907 189 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 ZNF580Q9UK33 172 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 SIVA1O15304 175 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 BUB3O43684 328 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 SMCPP49901 116 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 PRR9Q5T870 116 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 MORN3Q6PF18 240 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 ZNF493Q6ZR52 646 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 CCDC140Q96MF4 163 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 SIRPDQ9H106 197 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 TRAV12-2A0A075B6T6 113 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 LMO4P61968 165 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 C11orf71Q6IPW1 123 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 LYPD1Q8N2G4 141 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 C1QTNF4Q9BXJ3 329 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 C11orf86A6NJI1 115 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 SNCGO76070 127 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 SUMO2P61956 95 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 ZNF56Q15929 161 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 OR10J6PQ8NGY7 276 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 FAM110DQ8TAY7 271 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 PIMREGQ9BSJ6 248 aa7.57□□□□□ -1.2
CDC42SE1-202ENST00000439374 CELSR2Q9HCU4 2923 aa7.56□□□□□ -1.2
CDC42SE1-202ENST00000439374 IGHV4-30-2A0A087WSY4 118 aa7.56□□□□□ -1.2
CDC42SE1-202ENST00000439374 LGALS3P17931 250 aaKnown RBP7.56□□□□□ -1.2
CDC42SE1-202ENST00000439374 ZFAND6Q6FIF0 208 aa7.56□□□□□ -1.2
CDC42SE1-202ENST00000439374 ITLN2Q8WWU7 325 aaPredicted RBP7.56□□□□□ -1.2
CDC42SE1-202ENST00000439374 SMIM2Q9BVW6 85 aa7.56□□□□□ -1.2
CDC42SE1-202ENST00000439374 ZNF688P0C7X2 276 aa7.56□□□□□ -1.2
CDC42SE1-202ENST00000439374 EDN2P20800 178 aa7.56□□□□□ -1.2
CDC42SE1-202ENST00000439374 PDE6HQ13956 83 aa7.56□□□□□ -1.2
CDC42SE1-202ENST00000439374 FBXL19-AS1Q494R0 122 aa7.56□□□□□ -1.2
CDC42SE1-202ENST00000439374 SPXQ9BT56 116 aa7.56□□□□□ -1.2
CDC42SE1-202ENST00000439374 KNCNA6PVL3 124 aa7.55□□□□□ -1.2
CDC42SE1-202ENST00000439374 A8MZ25 164 aa7.55□□□□□ -1.2
CDC42SE1-202ENST00000439374 IGLC6P0CF74 106 aa7.55□□□□□ -1.2
CDC42SE1-202ENST00000439374 HERVK_113P61574 105 aa7.55□□□□□ -1.2
CDC42SE1-202ENST00000439374 C10orf99Q6UWK7 81 aa7.55□□□□□ -1.2
CDC42SE1-202ENST00000439374 TMEM238LA0A1B0GVL6 79 aa7.55□□□□□ -1.2
CDC42SE1-202ENST00000439374 A6NJY4 79 aa7.55□□□□□ -1.2
CDC42SE1-202ENST00000439374 CEMP1Q6PRD7 247 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-202ENST00000439374 TM2D2Q9BX73 214 aa7.55□□□□□ -1.2
CDC42SE1-202ENST00000439374 RBAKDNA6NC62 111 aa7.55□□□□□ -1.2
CDC42SE1-202ENST00000439374 PRM2P04554 102 aa7.55□□□□□ -1.2
CDC42SE1-202ENST00000439374 PLNP26678 52 aa7.55□□□□□ -1.2
CDC42SE1-202ENST00000439374 GAGE2BQ13066 116 aa7.55□□□□□ -1.2
CDC42SE1-202ENST00000439374 GAGE2EQ4V326 116 aa7.55□□□□□ -1.2
CDC42SE1-202ENST00000439374 GAGE2DQ9UEU5 116 aa7.55□□□□□ -1.2
CDC42SE1-202ENST00000439374 TEX49A0A1B0GTD5 131 aa7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 CCDC179H3BU77 68 aa7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 MRPS12O15235 138 aaKnown RBP7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 CD7P09564 240 aa7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 CDIP1Q9H305 208 aa7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 MOB4Q9Y3A3 225 aa7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 TRAV4A0A0B4J268 109 aa7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 A4D1N5 150 aa7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 CRLF1O75462 422 aa7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 IGHG4P01861 327 aa7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 BAALCQ8WXS3 180 aa7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 RHPN1-AS1Q9BWJ2 59 aa7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 IGHV1-69DA0A0B4J2H0 117 aa7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 IGHV1-69P01742 117 aa7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 RASL10AQ92737 203 aa7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 CARD19Q96LW7 228 aa7.54□□□□□ -1.2
CDC42SE1-202ENST00000439374 SLC25A20O43772 301 aa7.53□□□□□ -1.2
CDC42SE1-202ENST00000439374 ZNF48Q96MX3 618 aaPredicted RBP7.53□□□□□ -1.2
CDC42SE1-202ENST00000439374 DUX3Q96PT4 197 aa7.53□□□□□ -1.2
CDC42SE1-202ENST00000439374 KLK9Q9UKQ9 250 aa7.53□□□□□ -1.2
CDC42SE1-202ENST00000439374 HERV-K104P63124 156 aa7.53□□□□□ -1.2
CDC42SE1-202ENST00000439374 C5orf56Q8N8D9 126 aa7.53□□□□□ -1.2
CDC42SE1-202ENST00000439374 AJUBAQ96IF1 538 aa7.53□□□□□ -1.2
CDC42SE1-202ENST00000439374 U3KQK5 164 aa7.53□□□□□ -1.2
CDC42SE1-202ENST00000439374 ZFHX3Q15911 3703 aa7.53□□□□□ -1.2
CDC42SE1-202ENST00000439374 ASIPP42127 132 aa7.53□□□□□ -1.2
CDC42SE1-202ENST00000439374 FASNP49327 2511 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-202ENST00000439374 TRBV7-3A0A075B6L6 115 aa7.52□□□□□ -1.21
CDC42SE1-202ENST00000439374 OOSP1A8MZH6 123 aa7.52□□□□□ -1.21
CDC42SE1-202ENST00000439374 TSPEAR-AS2P59090 65 aa7.52□□□□□ -1.21
CDC42SE1-202ENST00000439374 NRACQ8N912 160 aa7.52□□□□□ -1.21
CDC42SE1-202ENST00000439374 GATD1Q8NB37 220 aa7.52□□□□□ -1.21
CDC42SE1-202ENST00000439374 PPDPFLQ8WWR9 84 aa7.52□□□□□ -1.21
CDC42SE1-202ENST00000439374 SLC50A1Q9BRV3 221 aa7.52□□□□□ -1.21
CDC42SE1-202ENST00000439374 USP24Q9UPU5 2620 aa7.52□□□□□ -1.21
CDC42SE1-202ENST00000439374 IGHV4-59P01825 116 aa7.52□□□□□ -1.21
CDC42SE1-202ENST00000439374 PSMG4Q5JS54 123 aa7.52□□□□□ -1.21
CDC42SE1-202ENST00000439374 C20orf173Q96LM9 149 aa7.52□□□□□ -1.21
CDC42SE1-202ENST00000439374 HIGD1BQ9P298 99 aa7.52□□□□□ -1.21
CDC42SE1-202ENST00000439374 TRAV8-3A0A0A6YYJ7 113 aa7.51□□□□□ -1.21
CDC42SE1-202ENST00000439374 ELANEP08246 267 aa7.51□□□□□ -1.21
CDC42SE1-202ENST00000439374 CFAP126Q5VTH2 177 aa7.51□□□□□ -1.21
CDC42SE1-202ENST00000439374 CLEC2BQ92478 149 aa7.51□□□□□ -1.21
CDC42SE1-202ENST00000439374 SPATA25Q9BR10 227 aa7.51□□□□□ -1.21
CDC42SE1-202ENST00000439374 IGKV3OR2-268A0A0C4DH90 116 aa7.51□□□□□ -1.21
CDC42SE1-202ENST00000439374 MRPL23Q16540 153 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms