RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 TRPT1Q86TN4 253 aaKnown RBP10.24□□□□□ -0.77
PCNX3-202ENST00000439247 TEN1Q86WV5 123 aa10.24□□□□□ -0.77
PCNX3-202ENST00000439247 ATP6V0E2Q8NHE4 81 aa10.24□□□□□ -0.77
PCNX3-202ENST00000439247 SCGB1C2P0DMR2 95 aa10.23□□□□□ -0.77
PCNX3-202ENST00000439247 ZFP36P26651 326 aaKnown RBP10.23□□□□□ -0.77
PCNX3-202ENST00000439247 SS18L2Q9UHA2 77 aa10.23□□□□□ -0.77
PCNX3-202ENST00000439247 TP53TG1Q9Y2A0 90 aa10.23□□□□□ -0.77
PCNX3-202ENST00000439247 RNASE4P34096 147 aaKnown RBP10.23□□□□□ -0.77
PCNX3-202ENST00000439247 SHISA2Q6UWI4 295 aa10.23□□□□□ -0.77
PCNX3-202ENST00000439247 PPDPFLQ8WWR9 84 aa10.23□□□□□ -0.77
PCNX3-202ENST00000439247 USP9YO00507 2555 aaPredicted RBP10.23□□□□□ -0.77
PCNX3-202ENST00000439247 TMEM170BQ5T4T1 132 aa10.22□□□□□ -0.77
PCNX3-202ENST00000439247 ZFAND2AQ8N6M9 145 aa10.22□□□□□ -0.77
PCNX3-202ENST00000439247 METTL26Q96S19 204 aa10.22□□□□□ -0.77
PCNX3-202ENST00000439247 DPH3P1Q9H4G8 78 aa10.22□□□□□ -0.77
PCNX3-202ENST00000439247 IGHV3-64A0A075B6Q5 118 aa10.22□□□□□ -0.77
PCNX3-202ENST00000439247 GPHB5Q86YW7 130 aa10.22□□□□□ -0.77
PCNX3-202ENST00000439247 OPRPNQ99935 248 aaPredicted RBP10.22□□□□□ -0.77
PCNX3-202ENST00000439247 FAM110DQ8TAY7 271 aaPredicted RBP10.22□□□□□ -0.77
PCNX3-202ENST00000439247 HELZ2Q9BYK8 2649 aaKnown RBP10.22□□□□□ -0.77
PCNX3-202ENST00000439247 EIF4EBP3O60516 100 aaPredicted RBP10.21□□□□□ -0.77
PCNX3-202ENST00000439247 IGHV3-30P01768 117 aa10.21□□□□□ -0.77
PCNX3-202ENST00000439247 IGHV3-30-5P0DP03 117 aa10.21□□□□□ -0.77
PCNX3-202ENST00000439247 UBTD1Q9HAC8 227 aa10.21□□□□□ -0.77
PCNX3-202ENST00000439247 TRBV12-3P01733 135 aa10.21□□□□□ -0.78
PCNX3-202ENST00000439247 ZNRF2Q8NHG8 242 aa10.21□□□□□ -0.78
PCNX3-202ENST00000439247 A0A087WWL8 130 aa10.2□□□□□ -0.78
PCNX3-202ENST00000439247 A8MWV9 139 aa10.2□□□□□ -0.78
PCNX3-202ENST00000439247 UNQ9165/PRO28630Q6UXU0 137 aa10.2□□□□□ -0.78
PCNX3-202ENST00000439247 POLQO75417 2590 aa10.2□□□□□ -0.78
PCNX3-202ENST00000439247 ELANEP08246 267 aa10.2□□□□□ -0.78
PCNX3-202ENST00000439247 TMEM219Q86XT9 240 aa10.2□□□□□ -0.78
PCNX3-202ENST00000439247 ERG28Q9UKR5 140 aa10.2□□□□□ -0.78
PCNX3-202ENST00000439247 ZNF688P0C7X2 276 aa10.2□□□□□ -0.78
PCNX3-202ENST00000439247 ASIPP42127 132 aa10.2□□□□□ -0.78
PCNX3-202ENST00000439247 RPL11P62913 178 aaKnown RBP10.2□□□□□ -0.78
PCNX3-202ENST00000439247 C11orf71Q6IPW1 123 aa10.2□□□□□ -0.78
PCNX3-202ENST00000439247 ANAPC13Q9BS18 74 aa10.2□□□□□ -0.78
PCNX3-202ENST00000439247 C9JAW5 83 aa10.19□□□□□ -0.78
PCNX3-202ENST00000439247 M0R1W7 72 aa10.19□□□□□ -0.78
PCNX3-202ENST00000439247 RNASE3P12724 160 aaKnown RBP10.19□□□□□ -0.78
PCNX3-202ENST00000439247 SRD5A1P18405 259 aa10.19□□□□□ -0.78
PCNX3-202ENST00000439247 AJUBAQ96IF1 538 aa10.19□□□□□ -0.78
PCNX3-202ENST00000439247 EBI3Q14213 229 aa10.18□□□□□ -0.78
PCNX3-202ENST00000439247 C10orf126Q8N4M7 172 aa10.18□□□□□ -0.78
PCNX3-202ENST00000439247 ZNF580Q9UK33 172 aa10.18□□□□□ -0.78
PCNX3-202ENST00000439247 A4D1N5 150 aa10.18□□□□□ -0.78
PCNX3-202ENST00000439247 IGIPA6NJ69 53 aa10.18□□□□□ -0.78
PCNX3-202ENST00000439247 CRLF1O75462 422 aa10.18□□□□□ -0.78
PCNX3-202ENST00000439247 TIMD4Q96H15 378 aa10.18□□□□□ -0.78
PCNX3-202ENST00000439247 ABCA12Q86UK0 2595 aa10.17□□□□□ -0.78
PCNX3-202ENST00000439247 B5MCH6 92 aa10.17□□□□□ -0.78
PCNX3-202ENST00000439247 AMELXQ99217 191 aa10.17□□□□□ -0.78
PCNX3-202ENST00000439247 BEX4Q9NWD9 120 aaPredicted RBP10.17□□□□□ -0.78
PCNX3-202ENST00000439247 TRBV20-1A0A075B6N2 111 aa10.17□□□□□ -0.78
PCNX3-202ENST00000439247 IGHV3OR16-10A0A075B7F0 116 aa10.17□□□□□ -0.78
PCNX3-202ENST00000439247 TRAV21A0A0B4J279 112 aa10.17□□□□□ -0.78
PCNX3-202ENST00000439247 SLC25A29Q8N8R3 303 aa10.17□□□□□ -0.78
PCNX3-202ENST00000439247 EEF1AKMT3Q96AZ1 226 aa10.17□□□□□ -0.78
PCNX3-202ENST00000439247 PRO1854Q9UHT4 67 aa10.17□□□□□ -0.78
PCNX3-202ENST00000439247 F5H697 171 aa10.16□□□□□ -0.78
PCNX3-202ENST00000439247 SLC25A20O43772 301 aa10.16□□□□□ -0.78
PCNX3-202ENST00000439247 U3KQE9 123 aa10.16□□□□□ -0.78
PCNX3-202ENST00000439247 CUBNO60494 3623 aa10.16□□□□□ -0.78
PCNX3-202ENST00000439247 TRAV2A0A0B4J234 112 aa10.16□□□□□ -0.78
PCNX3-202ENST00000439247 LINC00315P59091 139 aa10.16□□□□□ -0.78
PCNX3-202ENST00000439247 PMVKQ15126 192 aa10.16□□□□□ -0.78
PCNX3-202ENST00000439247 NRGNQ92686 78 aa10.16□□□□□ -0.78
PCNX3-202ENST00000439247 ZNF256Q9Y2P7 627 aaPredicted RBP10.16□□□□□ -0.78
PCNX3-202ENST00000439247 PTPN13Q12923 2485 aa10.16□□□□□ -0.78
PCNX3-202ENST00000439247 CENPVL3A0A0U1RRI6 287 aa10.16□□□□□ -0.78
PCNX3-202ENST00000439247 NHLRC4P0CG21 123 aaPredicted RBP10.16□□□□□ -0.78
PCNX3-202ENST00000439247 SAA4P35542 130 aa10.16□□□□□ -0.78
PCNX3-202ENST00000439247 FAM74A4Q5TZK3 123 aa10.16□□□□□ -0.78
PCNX3-202ENST00000439247 SBSPONQ8IVN8 264 aa10.16□□□□□ -0.78
PCNX3-202ENST00000439247 OR10J6PQ8NGY7 276 aa10.16□□□□□ -0.78
PCNX3-202ENST00000439247 GCN1Q92616 2671 aaKnown RBP10.15□□□□□ -0.78
PCNX3-202ENST00000439247 TRAV4A0A0B4J268 109 aa10.15□□□□□ -0.78
PCNX3-202ENST00000439247 EDN2P20800 178 aa10.15□□□□□ -0.78
PCNX3-202ENST00000439247 SUMO4Q6EEV6 95 aa10.15□□□□□ -0.78
PCNX3-202ENST00000439247 MRPL53Q96EL3 112 aaKnown RBP10.15□□□□□ -0.78
PCNX3-202ENST00000439247 DOPEY2Q9Y3R5 2298 aa10.15□□□□□ -0.78
PCNX3-202ENST00000439247 ADARB2-AS1A8MUL3 147 aa10.15□□□□□ -0.79
PCNX3-202ENST00000439247 J3QQQ9 107 aa10.15□□□□□ -0.79
PCNX3-202ENST00000439247 IGHV3-11P01762 117 aa10.15□□□□□ -0.79
PCNX3-202ENST00000439247 IGHV4-39P01824 125 aa10.15□□□□□ -0.79
PCNX3-202ENST00000439247 HERVK_113P61574 105 aa10.15□□□□□ -0.79
PCNX3-202ENST00000439247 ZFAND6Q6FIF0 208 aa10.15□□□□□ -0.79
PCNX3-202ENST00000439247 SORL1Q92673 2214 aa10.14□□□□□ -0.79
PCNX3-202ENST00000439247 TEX29Q8N6K0 151 aa10.14□□□□□ -0.79
PCNX3-202ENST00000439247 NTN5Q8WTR8 489 aaPredicted RBP10.14□□□□□ -0.79
PCNX3-202ENST00000439247 KIF25-AS1Q9Y6Z4 181 aa10.14□□□□□ -0.79
PCNX3-202ENST00000439247 C9orf139Q6ZV77 190 aa10.13□□□□□ -0.79
PCNX3-202ENST00000439247 LINC00477Q96M19 166 aa10.13□□□□□ -0.79
PCNX3-202ENST00000439247 TEX49A0A1B0GTD5 131 aa10.13□□□□□ -0.79
PCNX3-202ENST00000439247 SDHAF1A6NFY7 115 aa10.13□□□□□ -0.79
PCNX3-202ENST00000439247 LGALS3P17931 250 aaKnown RBP10.13□□□□□ -0.79
PCNX3-202ENST00000439247 LYRM7Q5U5X0 104 aa10.13□□□□□ -0.79
PCNX3-202ENST00000439247 MUSTN1Q8IVN3 82 aa10.13□□□□□ -0.79
PCNX3-202ENST00000439247 SIRPDQ9H106 197 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms