RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 C16orf74Q96GX8 76 aa8.32□□□□□ -1.08
SNHG3-202ENST00000437681 PRKDCP78527 4128 aaKnown RBP8.31□□□□□ -1.08
SNHG3-202ENST00000437681 C3orf84H3BNL1 204 aa8.31□□□□□ -1.08
SNHG3-202ENST00000437681 DEFB135Q30KP9 77 aa8.31□□□□□ -1.08
SNHG3-202ENST00000437681 MPV17L2Q567V2 206 aa8.31□□□□□ -1.08
SNHG3-202ENST00000437681 C1orf158Q8N1D5 194 aa8.31□□□□□ -1.08
SNHG3-202ENST00000437681 ZFAND2AQ8N6M9 145 aa8.31□□□□□ -1.08
SNHG3-202ENST00000437681 MRPL18Q9H0U6 180 aaKnown RBP8.31□□□□□ -1.08
SNHG3-202ENST00000437681 H3BTX0 84 aa8.31□□□□□ -1.08
SNHG3-202ENST00000437681 IBA57Q5T440 356 aaKnown RBP8.31□□□□□ -1.08
SNHG3-202ENST00000437681 LYRM9A8MSI8 78 aa8.3□□□□□ -1.08
SNHG3-202ENST00000437681 RNASEKQ6P5S7 137 aaKnown RBP8.3□□□□□ -1.08
SNHG3-202ENST00000437681 ZC2HC1AQ96GY0 325 aa8.3□□□□□ -1.08
SNHG3-202ENST00000437681 TP73-AS1Q9UF72 201 aa8.3□□□□□ -1.08
SNHG3-202ENST00000437681 ERG28Q9UKR5 140 aa8.3□□□□□ -1.08
SNHG3-202ENST00000437681 NOTCH3Q9UM47 2321 aa8.3□□□□□ -1.08
SNHG3-202ENST00000437681 TRAV8-6A0A0B4J262 113 aa8.3□□□□□ -1.08
SNHG3-202ENST00000437681 ZNF324O75467 553 aaPredicted RBP8.3□□□□□ -1.08
SNHG3-202ENST00000437681 IGLV2-11P01706 119 aa8.3□□□□□ -1.08
SNHG3-202ENST00000437681 TCTAP57738 103 aa8.3□□□□□ -1.08
SNHG3-202ENST00000437681 HSD52Q0P140 79 aa8.3□□□□□ -1.08
SNHG3-202ENST00000437681 C18orf15Q96N68 181 aa8.3□□□□□ -1.08
SNHG3-202ENST00000437681 VGLL1Q99990 258 aa8.3□□□□□ -1.08
SNHG3-202ENST00000437681 HUWE1Q7Z6Z7 4374 aaKnown RBP8.29□□□□□ -1.08
SNHG3-202ENST00000437681 IGKV2-40A0A087WW87 121 aaPredicted RBP8.29□□□□□ -1.08
SNHG3-202ENST00000437681 TRAV21A0A0B4J279 112 aa8.29□□□□□ -1.08
SNHG3-202ENST00000437681 GAGE12HA6NDE8 117 aa8.29□□□□□ -1.08
SNHG3-202ENST00000437681 IGKV2D-40P01614 121 aaPredicted RBP8.29□□□□□ -1.08
SNHG3-202ENST00000437681 PMCHP20382 165 aa8.29□□□□□ -1.08
SNHG3-202ENST00000437681 GOLT1AQ6ZVE7 132 aa8.29□□□□□ -1.08
SNHG3-202ENST00000437681 TMEM263Q8WUH6 116 aaKnown RBP8.29□□□□□ -1.08
SNHG3-202ENST00000437681 KCNS1Q96KK3 526 aa8.29□□□□□ -1.08
SNHG3-202ENST00000437681 C1orf43Q9BWL3 253 aa8.29□□□□□ -1.08
SNHG3-202ENST00000437681 MAP1LC3CQ9BXW4 147 aa8.29□□□□□ -1.08
SNHG3-202ENST00000437681 XCL2Q9UBD3 114 aa8.29□□□□□ -1.08
SNHG3-202ENST00000437681 SPINK13Q1W4C9 94 aa8.29□□□□□ -1.08
SNHG3-202ENST00000437681 RRN3P1Q2M238 152 aa8.29□□□□□ -1.08
SNHG3-202ENST00000437681 MRPL16Q9NX20 251 aaKnown RBP8.29□□□□□ -1.08
SNHG3-202ENST00000437681 C11orf94C9JXX5 98 aa8.28□□□□□ -1.08
SNHG3-202ENST00000437681 F5H768 121 aa8.28□□□□□ -1.08
SNHG3-202ENST00000437681 PAGE4O60829 102 aa8.28□□□□□ -1.08
SNHG3-202ENST00000437681 LTAP01374 205 aa8.28□□□□□ -1.08
SNHG3-202ENST00000437681 PIK3CD-AS1Q5SR53 167 aa8.28□□□□□ -1.08
SNHG3-202ENST00000437681 BVES-AS1Q5T3Y7 98 aa8.28□□□□□ -1.08
SNHG3-202ENST00000437681 TRGV11A0A075B6L2 103 aa8.28□□□□□ -1.08
SNHG3-202ENST00000437681 A0A087WX48 190 aa8.28□□□□□ -1.08
SNHG3-202ENST00000437681 MUC21A0A0G2JKD1 596 aa8.28□□□□□ -1.08
SNHG3-202ENST00000437681 MUC21A0A140T8X8 626 aa8.28□□□□□ -1.08
SNHG3-202ENST00000437681 ERCC8Q13216 396 aa8.28□□□□□ -1.08
SNHG3-202ENST00000437681 MUC21Q5SSG8 566 aa8.28□□□□□ -1.08
SNHG3-202ENST00000437681 GTF2H5Q6ZYL4 71 aa8.28□□□□□ -1.08
SNHG3-202ENST00000437681 Q86TA4 180 aa8.28□□□□□ -1.08
SNHG3-202ENST00000437681 TRAV9-2A0A087WT02 112 aa8.27□□□□□ -1.09
SNHG3-202ENST00000437681 NUDT3O95989 172 aa8.27□□□□□ -1.09
SNHG3-202ENST00000437681 DAZ2Q13117 558 aaKnown RBP8.27□□□□□ -1.09
SNHG3-202ENST00000437681 NEGR1Q7Z3B1 354 aa8.27□□□□□ -1.09
SNHG3-202ENST00000437681 LINC00612Q8N6U2 182 aa8.27□□□□□ -1.09
SNHG3-202ENST00000437681 LY96Q9Y6Y9 160 aa8.27□□□□□ -1.09
SNHG3-202ENST00000437681 UBE2G1P62253 170 aa8.27□□□□□ -1.09
SNHG3-202ENST00000437681 PMCHL1Q16048 86 aa8.27□□□□□ -1.09
SNHG3-202ENST00000437681 IGHV4-28A0A0C4DH34 117 aa8.26□□□□□ -1.09
SNHG3-202ENST00000437681 M0R2Z0 102 aa8.26□□□□□ -1.09
SNHG3-202ENST00000437681 DEFB1P60022 68 aa8.26□□□□□ -1.09
SNHG3-202ENST00000437681 FAM19A2Q8N3H0 131 aa8.26□□□□□ -1.09
SNHG3-202ENST00000437681 LINC01587Q99440 93 aa8.26□□□□□ -1.09
SNHG3-202ENST00000437681 NOTCH1P46531 2555 aa8.26□□□□□ -1.09
SNHG3-202ENST00000437681 IGHV1OR15-1A0A075B7D0 117 aa8.26□□□□□ -1.09
SNHG3-202ENST00000437681 C9JCJ5 164 aa8.26□□□□□ -1.09
SNHG3-202ENST00000437681 IGKV3-20P01619 116 aa8.26□□□□□ -1.09
SNHG3-202ENST00000437681 LGALS9BQ3B8N2 356 aa8.26□□□□□ -1.09
SNHG3-202ENST00000437681 UFSP1Q6NVU6 142 aa8.26□□□□□ -1.09
SNHG3-202ENST00000437681 SPART-AS1P0CW21 52 aa8.25□□□□□ -1.09
SNHG3-202ENST00000437681 MED14OSP0DP75 135 aa8.25□□□□□ -1.09
SNHG3-202ENST00000437681 SNURFLB1AK76 121 aa8.25□□□□□ -1.09
SNHG3-202ENST00000437681 GNG5P63218 68 aa8.25□□□□□ -1.09
SNHG3-202ENST00000437681 RETNQ9HD89 108 aa8.25□□□□□ -1.09
SNHG3-202ENST00000437681 NUPR2A6NF83 97 aa8.24□□□□□ -1.09
SNHG3-202ENST00000437681 GAGE10A6NGK3 116 aa8.24□□□□□ -1.09
SNHG3-202ENST00000437681 FABP5P3A8MUU1 101 aa8.24□□□□□ -1.09
SNHG3-202ENST00000437681 RBMY1A1P0DJD3 496 aaKnown RBP8.24□□□□□ -1.09
SNHG3-202ENST00000437681 RBMY1CP0DJD4 496 aa8.24□□□□□ -1.09
SNHG3-202ENST00000437681 ATP5G3P48201 142 aa8.24□□□□□ -1.09
SNHG3-202ENST00000437681 RBMY1FQ15415 496 aaKnown RBP8.24□□□□□ -1.09
SNHG3-202ENST00000437681 BORCS7Q96B45 105 aa8.24□□□□□ -1.09
SNHG3-202ENST00000437681 MLST8Q9BVC4 326 aa8.24□□□□□ -1.09
SNHG3-202ENST00000437681 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.24□□□□□ -1.09
SNHG3-202ENST00000437681 SMIM17P0DL12 118 aa8.24□□□□□ -1.09
SNHG3-202ENST00000437681 RNASE4P34096 147 aaKnown RBP8.24□□□□□ -1.09
SNHG3-202ENST00000437681 TCL1AP56279 114 aa8.24□□□□□ -1.09
SNHG3-202ENST00000437681 ZNF415Q09FC8 603 aa8.24□□□□□ -1.09
SNHG3-202ENST00000437681 OR10J3Q5JRS4 329 aa8.24□□□□□ -1.09
SNHG3-202ENST00000437681 MUC7Q8TAX7 377 aa8.24□□□□□ -1.09
SNHG3-202ENST00000437681 A0A0J9YWU9 116 aa8.23□□□□□ -1.09
SNHG3-202ENST00000437681 K7EN84 100 aa8.23□□□□□ -1.09
SNHG3-202ENST00000437681 FXYD7P58549 80 aa8.23□□□□□ -1.09
SNHG3-202ENST00000437681 TSKUQ8WUA8 353 aa8.23□□□□□ -1.09
SNHG3-202ENST00000437681 DKK2Q9UBU2 259 aa8.23□□□□□ -1.09
SNHG3-202ENST00000437681 TIMM8BQ9Y5J9 83 aaPredicted RBP8.23□□□□□ -1.09
SNHG3-202ENST00000437681 AGRNO00468 2067 aa8.23□□□□□ -1.09
SNHG3-202ENST00000437681 NTF3P20783 257 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms