RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 TEX46H3BTG2 121 aa12.37□□□□□ -0.43
HMGN1-207ENST00000436324 IGHV3-30P01768 117 aa12.37□□□□□ -0.43
HMGN1-207ENST00000436324 IGHV3-33P01772 117 aa12.37□□□□□ -0.43
HMGN1-207ENST00000436324 IGHV3-30-3P0DP02 117 aa12.37□□□□□ -0.43
HMGN1-207ENST00000436324 IGHV3-30-5P0DP03 117 aa12.37□□□□□ -0.43
HMGN1-207ENST00000436324 FUSP35637 526 aaKnown RBP eCLIP12.37□□□□□ -0.43
HMGN1-207ENST00000436324 RPL35P42766 123 aaKnown RBP12.37□□□□□ -0.43
HMGN1-207ENST00000436324 LELP1Q5T871 98 aa12.37□□□□□ -0.43
HMGN1-207ENST00000436324 ZFP82Q8N141 532 aa12.37□□□□□ -0.43
HMGN1-207ENST00000436324 SFRP2Q96HF1 295 aa12.37□□□□□ -0.43
HMGN1-207ENST00000436324 K7EP13 123 aa12.36□□□□□ -0.43
HMGN1-207ENST00000436324 RHODO00212 210 aa12.36□□□□□ -0.43
HMGN1-207ENST00000436324 EREGO14944 169 aa12.36□□□□□ -0.43
HMGN1-207ENST00000436324 ERVFC1-1P60608 527 aa12.36□□□□□ -0.43
HMGN1-207ENST00000436324 SLC51BQ86UW2 128 aa12.36□□□□□ -0.43
HMGN1-207ENST00000436324 C10orf126Q8N4M7 172 aa12.36□□□□□ -0.43
HMGN1-207ENST00000436324 MUC21A0A0G2JKD1 596 aa12.35□□□□□ -0.43
HMGN1-207ENST00000436324 MUC21A0A140T8X8 626 aa12.35□□□□□ -0.43
HMGN1-207ENST00000436324 SSTP61278 116 aa12.35□□□□□ -0.43
HMGN1-207ENST00000436324 LINC01556Q5JQF7 62 aa12.35□□□□□ -0.43
HMGN1-207ENST00000436324 AKAP14Q86UN6 197 aa12.35□□□□□ -0.43
HMGN1-207ENST00000436324 KRTAP17-1Q9BYP8 105 aa12.35□□□□□ -0.43
HMGN1-207ENST00000436324 LINC00694P0DN24 101 aa12.34□□□□□ -0.43
HMGN1-207ENST00000436324 C11orf52Q96A22 123 aa12.34□□□□□ -0.43
HMGN1-207ENST00000436324 RAB19A4D1S5 217 aa12.33□□□□□ -0.44
HMGN1-207ENST00000436324 CENPWQ5EE01 88 aa12.33□□□□□ -0.44
HMGN1-207ENST00000436324 OR10AG1Q8NH19 301 aa12.33□□□□□ -0.44
HMGN1-207ENST00000436324 Q9HAA7 133 aa12.33□□□□□ -0.44
HMGN1-207ENST00000436324 A0A087WTM6 91 aa12.32□□□□□ -0.44
HMGN1-207ENST00000436324 IBA57-AS1B1ANH7 110 aa12.32□□□□□ -0.44
HMGN1-207ENST00000436324 IFNA1P01562 189 aa12.32□□□□□ -0.44
HMGN1-207ENST00000436324 Q8N3U1 123 aa12.32□□□□□ -0.44
HMGN1-207ENST00000436324 CXCL1P09341 107 aa12.31□□□□□ -0.44
HMGN1-207ENST00000436324 C9orf62Q8N4C0 152 aa12.31□□□□□ -0.44
HMGN1-207ENST00000436324 PSCAO43653 123 aa12.3□□□□□ -0.44
HMGN1-207ENST00000436324 CDK2AP2O75956 126 aa12.3□□□□□ -0.44
HMGN1-207ENST00000436324 IGLV2-8P01709 118 aa12.3□□□□□ -0.44
HMGN1-207ENST00000436324 MEF2BQ02080 365 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-207ENST00000436324 SPANXN1Q5VSR9 72 aa12.3□□□□□ -0.44
HMGN1-207ENST00000436324 DAZAP1Q96EP5 407 aaKnown RBP12.3□□□□□ -0.44
HMGN1-207ENST00000436324 MED9Q9NWA0 146 aa12.3□□□□□ -0.44
HMGN1-207ENST00000436324 SNAI2O43623 268 aa12.29□□□□□ -0.44
HMGN1-207ENST00000436324 PDE6DO43924 150 aa12.29□□□□□ -0.44
HMGN1-207ENST00000436324 GZMBP10144 247 aa12.29□□□□□ -0.44
HMGN1-207ENST00000436324 BCL2P10415 239 aa12.29□□□□□ -0.44
HMGN1-207ENST00000436324 GNG4P50150 75 aa12.29□□□□□ -0.44
HMGN1-207ENST00000436324 ZNF56Q15929 161 aa12.29□□□□□ -0.44
HMGN1-207ENST00000436324 PGPEP1Q9NXJ5 209 aa12.29□□□□□ -0.44
HMGN1-207ENST00000436324 OR5AL1P0C617 328 aa12.28□□□□□ -0.44
HMGN1-207ENST00000436324 OR2D3Q8NGH3 330 aa12.28□□□□□ -0.44
HMGN1-207ENST00000436324 TPPP3Q9BW30 176 aa12.28□□□□□ -0.44
HMGN1-207ENST00000436324 SSBP4Q9BWG4 385 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-207ENST00000436324 VAX2Q9UIW0 290 aa12.28□□□□□ -0.44
HMGN1-207ENST00000436324 LRP1BQ9NZR2 4599 aa12.27□□□□□ -0.44
HMGN1-207ENST00000436324 A0A087WWC5 75 aa12.27□□□□□ -0.45
HMGN1-207ENST00000436324 RBFOX3A6NFN3 312 aa12.27□□□□□ -0.45
HMGN1-207ENST00000436324 RPL36AP83881 106 aaKnown RBP12.27□□□□□ -0.45
HMGN1-207ENST00000436324 RPL36ALQ969Q0 106 aaKnown RBP12.27□□□□□ -0.45
HMGN1-207ENST00000436324 F5H697 171 aa12.26□□□□□ -0.45
HMGN1-207ENST00000436324 RAB4BP61018 213 aa12.26□□□□□ -0.45
HMGN1-207ENST00000436324 ALKAL2Q6UX46 152 aa12.26□□□□□ -0.45
HMGN1-207ENST00000436324 DAZ4Q86SG3 579 aaKnown RBP12.26□□□□□ -0.45
HMGN1-207ENST00000436324 MAPKAPK5-AS1Q8N8E1 139 aa12.26□□□□□ -0.45
HMGN1-207ENST00000436324 KRTAP4-5Q9BYR2 181 aa12.26□□□□□ -0.45
HMGN1-207ENST00000436324 DAZ3Q9NR90 486 aaKnown RBP12.26□□□□□ -0.45
HMGN1-207ENST00000436324 TRBV7-3A0A075B6L6 115 aa12.25□□□□□ -0.45
HMGN1-207ENST00000436324 TRBV10-1A0A0K0K1A3 114 aa12.25□□□□□ -0.45
HMGN1-207ENST00000436324 TRBV20OR9-2A0A075B6H5 130 aa12.24□□□□□ -0.45
HMGN1-207ENST00000436324 C19orf71A6NCJ1 209 aa12.24□□□□□ -0.45
HMGN1-207ENST00000436324 SMIM17P0DL12 118 aa12.24□□□□□ -0.45
HMGN1-207ENST00000436324 RPS20P60866 119 aaKnown RBP12.24□□□□□ -0.45
HMGN1-207ENST00000436324 UBE2D3P61077 147 aa12.24□□□□□ -0.45
HMGN1-207ENST00000436324 UBE2D2P62837 147 aa12.24□□□□□ -0.45
HMGN1-207ENST00000436324 FER1L6-AS1Q8NA97 138 aa12.24□□□□□ -0.45
HMGN1-207ENST00000436324 NEXN-AS1Q8NBZ9 246 aa12.24□□□□□ -0.45
HMGN1-207ENST00000436324 RYR1P21817 5038 aa12.24□□□□□ -0.45
HMGN1-207ENST00000436324 P01737 135 aa12.23□□□□□ -0.45
HMGN1-207ENST00000436324 NKX2-5P52952 324 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-207ENST00000436324 CDPF1Q6NVV7 123 aa12.23□□□□□ -0.45
HMGN1-207ENST00000436324 SMIM12Q96EX1 92 aa12.23□□□□□ -0.45
HMGN1-207ENST00000436324 URGCP-MRPS24S4R325 110 aa12.23□□□□□ -0.45
HMGN1-207ENST00000436324 A0A1B0GVG6 124 aa12.22□□□□□ -0.45
HMGN1-207ENST00000436324 LRCOL1A6NCL2 159 aa12.22□□□□□ -0.45
HMGN1-207ENST00000436324 IGLC6P0CF74 106 aa12.22□□□□□ -0.45
HMGN1-207ENST00000436324 TAGLN2P37802 199 aaKnown RBP12.22□□□□□ -0.45
HMGN1-207ENST00000436324 BLOC1S1P78537 153 aa12.22□□□□□ -0.45
HMGN1-207ENST00000436324 LAGE3Q14657 143 aa12.22□□□□□ -0.45
HMGN1-207ENST00000436324 NIT1Q86X76 327 aa12.22□□□□□ -0.45
HMGN1-207ENST00000436324 OR10G8Q8NGN5 311 aa12.22□□□□□ -0.45
HMGN1-207ENST00000436324 AP1S3Q96PC3 154 aa12.22□□□□□ -0.45
HMGN1-207ENST00000436324 MGPP08493 103 aa12.21□□□□□ -0.45
HMGN1-207ENST00000436324 TM2D2Q9BX73 214 aa12.21□□□□□ -0.45
HMGN1-207ENST00000436324 BIN3Q9NQY0 253 aa12.21□□□□□ -0.45
HMGN1-207ENST00000436324 KIF25-AS1Q9Y6Z4 181 aa12.21□□□□□ -0.45
HMGN1-207ENST00000436324 HSPG2P98160 4391 aa12.21□□□□□ -0.46
HMGN1-207ENST00000436324 TRAV8-3A0A0A6YYJ7 113 aa12.2□□□□□ -0.46
HMGN1-207ENST00000436324 XKRY2A2RUG3 117 aa12.2□□□□□ -0.46
HMGN1-207ENST00000436324 KRTAP10-1P60331 282 aa12.2□□□□□ -0.46
HMGN1-207ENST00000436324 NUDT10Q8NFP7 164 aa12.2□□□□□ -0.46
HMGN1-207ENST00000436324 NUDT11Q96G61 164 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms