RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 PTPRMP28827 1452 aa-0.81□□□□□ -2.54
LINC01239-201ENST00000433645 SRRM2Q9UQ35 2752 aaKnown RBP-0.82□□□□□ -2.54
LINC01239-201ENST00000433645 TRBV7-1A0A0A6YYK4 115 aa-0.82□□□□□ -2.54
LINC01239-201ENST00000433645 CCDC179H3BU77 68 aa-0.82□□□□□ -2.54
LINC01239-201ENST00000433645 G0S2P27469 103 aa-0.82□□□□□ -2.54
LINC01239-201ENST00000433645 GNG10P50151 68 aa-0.82□□□□□ -2.54
LINC01239-201ENST00000433645 RPS28P62857 69 aaKnown RBP-0.82□□□□□ -2.54
LINC01239-201ENST00000433645 TMEM128Q5BJH2 165 aa-0.82□□□□□ -2.54
LINC01239-201ENST00000433645 FAM74A4Q5TZK3 123 aa-0.82□□□□□ -2.54
LINC01239-201ENST00000433645 SAMD13Q5VXD3 122 aa-0.82□□□□□ -2.54
LINC01239-201ENST00000433645 Q6ZRX8 168 aa-0.82□□□□□ -2.54
LINC01239-201ENST00000433645 Q96NJ1 140 aa-0.82□□□□□ -2.54
LINC01239-201ENST00000433645 SCP2D1Q9UJQ7 156 aa-0.82□□□□□ -2.54
LINC01239-201ENST00000433645 OVOS2A0A0G2JMS6 1433 aa-0.82□□□□□ -2.54
LINC01239-201ENST00000433645 TENM2Q9NT68 2774 aa-0.83□□□□□ -2.54
LINC01239-201ENST00000433645 TMEM14DPA8MWL7 114 aa-0.83□□□□□ -2.54
LINC01239-201ENST00000433645 YPEL1O60688 119 aa-0.83□□□□□ -2.54
LINC01239-201ENST00000433645 SLC25A6P12236 298 aa-0.83□□□□□ -2.54
LINC01239-201ENST00000433645 TFAMQ00059 246 aaKnown RBP-0.83□□□□□ -2.54
LINC01239-201ENST00000433645 INSL4Q14641 139 aa-0.83□□□□□ -2.54
LINC01239-201ENST00000433645 C4orf33Q8N1A6 199 aa-0.83□□□□□ -2.54
LINC01239-201ENST00000433645 TMEM35BQ8NCS4 154 aa-0.83□□□□□ -2.54
LINC01239-201ENST00000433645 IFI27L1Q96BM0 104 aa-0.83□□□□□ -2.54
LINC01239-201ENST00000433645 DNAJC15Q9Y5T4 150 aa-0.83□□□□□ -2.54
LINC01239-201ENST00000433645 PARP14Q460N5 1801 aa-0.83□□□□□ -2.54
LINC01239-201ENST00000433645 A0A1B0GV72 72 aa-0.84□□□□□ -2.54
LINC01239-201ENST00000433645 DPM2O94777 84 aa-0.84□□□□□ -2.54
LINC01239-201ENST00000433645 COX7B2Q8TF08 81 aa-0.84□□□□□ -2.54
LINC01239-201ENST00000433645 CNFNQ9BYD5 112 aa-0.84□□□□□ -2.54
LINC01239-201ENST00000433645 NRXN2Q9P2S2 1712 aa-0.84□□□□□ -2.54
LINC01239-201ENST00000433645 TNXBP22105 4242 aa-0.84□□□□□ -2.54
LINC01239-201ENST00000433645 RBP4P02753 201 aa-0.85□□□□□ -2.55
LINC01239-201ENST00000433645 TFF1P04155 84 aa-0.85□□□□□ -2.55
LINC01239-201ENST00000433645 HLA-DRB4P13762 266 aa-0.85□□□□□ -2.55
LINC01239-201ENST00000433645 GCHFRP30047 84 aa-0.85□□□□□ -2.55
LINC01239-201ENST00000433645 SNX29P2Q8IUI4 249 aa-0.85□□□□□ -2.55
LINC01239-201ENST00000433645 MAGOHBQ96A72 148 aaKnown RBP-0.85□□□□□ -2.55
LINC01239-201ENST00000433645 NOP16Q9Y3C1 178 aaKnown RBP-0.85□□□□□ -2.55
LINC01239-201ENST00000433645 V9GYV3 84 aa-0.85□□□□□ -2.55
LINC01239-201ENST00000433645 HLA-DRB4X5D2U9 266 aa-0.85□□□□□ -2.55
LINC01239-201ENST00000433645 MYH9P35579 1960 aaKnown RBP-0.86□□□□□ -2.55
LINC01239-201ENST00000433645 HECTD4Q9Y4D8 3996 aa-0.86□□□□□ -2.55
LINC01239-201ENST00000433645 ACYP2P14621 99 aa-0.86□□□□□ -2.55
LINC01239-201ENST00000433645 WFDC2Q14508 124 aa-0.86□□□□□ -2.55
LINC01239-201ENST00000433645 ATP11AUNQ6ZP68 121 aa-0.86□□□□□ -2.55
LINC01239-201ENST00000433645 UBE2DNLQ8IWF7 75 aa-0.86□□□□□ -2.55
LINC01239-201ENST00000433645 OR8I2Q8N0Y5 310 aa-0.86□□□□□ -2.55
LINC01239-201ENST00000433645 BATF3Q9NR55 127 aa-0.86□□□□□ -2.55
LINC01239-201ENST00000433645 PBRM1Q86U86 1689 aa-0.86□□□□□ -2.55
LINC01239-201ENST00000433645 ALMS1Q8TCU4 4167 aa-0.87□□□□□ -2.55
LINC01239-201ENST00000433645 PIEZO2Q9H5I5 2752 aa-0.87□□□□□ -2.55
LINC01239-201ENST00000433645 SIPA1L3O60292 1781 aaPredicted RBP-0.87□□□□□ -2.55
LINC01239-201ENST00000433645 BORCS7-ASMTA0A0B4J1R7 106 aa-0.87□□□□□ -2.55
LINC01239-201ENST00000433645 A0A0D9SFI3 127 aa-0.87□□□□□ -2.55
LINC01239-201ENST00000433645 J3KT08 172 aa-0.87□□□□□ -2.55
LINC01239-201ENST00000433645 DEGS1O15121 323 aa-0.87□□□□□ -2.55
LINC01239-201ENST00000433645 SMIM24O75264 130 aa-0.87□□□□□ -2.55
LINC01239-201ENST00000433645 NPC2P61916 151 aa-0.87□□□□□ -2.55
LINC01239-201ENST00000433645 C20orf197Q8N268 126 aa-0.87□□□□□ -2.55
LINC01239-201ENST00000433645 CALML5Q9NZT1 146 aa-0.87□□□□□ -2.55
LINC01239-201ENST00000433645 ZNF815PA8K554 130 aa-0.88□□□□□ -2.55
LINC01239-201ENST00000433645 PAEPP09466 180 aa-0.88□□□□□ -2.55
LINC01239-201ENST00000433645 SKA2Q8WVK7 121 aaPredicted RBP-0.88□□□□□ -2.55
LINC01239-201ENST00000433645 DDA1Q9BW61 102 aa-0.88□□□□□ -2.55
LINC01239-201ENST00000433645 V9GYQ6 96 aa-0.88□□□□□ -2.55
LINC01239-201ENST00000433645 SPTBN1Q01082 2364 aaKnown RBP-0.88□□□□□ -2.55
LINC01239-201ENST00000433645 APC2O95996 2303 aa-0.88□□□□□ -2.55
LINC01239-201ENST00000433645 A0A1B0GX51 115 aa-0.89□□□□□ -2.55
LINC01239-201ENST00000433645 J3QLW9 94 aa-0.89□□□□□ -2.55
LINC01239-201ENST00000433645 SCTP09683 121 aa-0.89□□□□□ -2.55
LINC01239-201ENST00000433645 SPINK8P0C7L1 97 aa-0.89□□□□□ -2.55
LINC01239-201ENST00000433645 SPCS2Q15005 226 aa-0.89□□□□□ -2.55
LINC01239-201ENST00000433645 SSBP3-AS1Q7Z2R9 100 aa-0.89□□□□□ -2.55
LINC01239-201ENST00000433645 GOLGA3Q08378 1498 aa-0.89□□□□□ -2.55
LINC01239-201ENST00000433645 MAP1BP46821 2468 aaKnown RBP-0.89□□□□□ -2.55
LINC01239-201ENST00000433645 PLCE1Q9P212 2302 aa-0.9□□□□□ -2.55
LINC01239-201ENST00000433645 TRGV1A0A0A0MS02 117 aa-0.9□□□□□ -2.55
LINC01239-201ENST00000433645 M0R2P5 195 aa-0.9□□□□□ -2.55
LINC01239-201ENST00000433645 M0R3E3 92 aa-0.9□□□□□ -2.55
LINC01239-201ENST00000433645 PIN1P1O15428 100 aa-0.9□□□□□ -2.55
LINC01239-201ENST00000433645 S100GP29377 79 aa-0.9□□□□□ -2.55
LINC01239-201ENST00000433645 DEFB109BQ30KR1 87 aa-0.9□□□□□ -2.55
LINC01239-201ENST00000433645 Q5VSD8 79 aa-0.9□□□□□ -2.55
LINC01239-201ENST00000433645 PPP1R2P3Q6NXS1 205 aa-0.9□□□□□ -2.55
LINC01239-201ENST00000433645 BANF2Q9H503 90 aa-0.9□□□□□ -2.55
LINC01239-201ENST00000433645 COL6A3P12111 3177 aa-0.91□□□□□ -2.55
LINC01239-201ENST00000433645 TRAV36DV7A0A075B6V5 113 aa-0.91□□□□□ -2.56
LINC01239-201ENST00000433645 TRAV12-3A0A0B4J271 114 aa-0.91□□□□□ -2.56
LINC01239-201ENST00000433645 PRO0255Q9UI72 69 aa-0.91□□□□□ -2.56
LINC01239-201ENST00000433645 PPRC1Q5VV67 1664 aaKnown RBP-0.91□□□□□ -2.56
LINC01239-201ENST00000433645 ARFGEF1Q9Y6D6 1849 aa-0.92□□□□□ -2.56
LINC01239-201ENST00000433645 TRBV10-3A0A0K0K1G6 114 aa-0.92□□□□□ -2.56
LINC01239-201ENST00000433645 MT-ND4LP03901 98 aa-0.92□□□□□ -2.56
LINC01239-201ENST00000433645 Q5VV11 94 aa-0.92□□□□□ -2.56
LINC01239-201ENST00000433645 TMEM244Q5VVB8 128 aa-0.92□□□□□ -2.56
LINC01239-201ENST00000433645 SPANXCQ9NY87 97 aa-0.92□□□□□ -2.56
LINC01239-201ENST00000433645 BSNQ9UPA5 3926 aa-0.93□□□□□ -2.56
LINC01239-201ENST00000433645 PDZD2O15018 2839 aa-0.93□□□□□ -2.56
LINC01239-201ENST00000433645 G3V318 75 aa-0.93□□□□□ -2.56
LINC01239-201ENST00000433645 FABP1P07148 127 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms