RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 TRBV7-3A0A075B6L6 115 aa5.4□□□□□ -1.54
CDH13-203ENST00000431540 A0A087WX48 190 aa5.4□□□□□ -1.54
CDH13-203ENST00000431540 INMT-MINDY4F8WBC2 141 aa5.4□□□□□ -1.54
CDH13-203ENST00000431540 ASIPP42127 132 aa5.4□□□□□ -1.54
CDH13-203ENST00000431540 CDC34P49427 236 aaPredicted RBP5.4□□□□□ -1.54
CDH13-203ENST00000431540 ZNF80P51504 273 aaPredicted RBP5.4□□□□□ -1.54
CDH13-203ENST00000431540 H2BFSP57053 126 aa5.4□□□□□ -1.54
CDH13-203ENST00000431540 SUMO1P63165 101 aaKnown RBP5.4□□□□□ -1.54
CDH13-203ENST00000431540 Q6ZRU5 148 aa5.4□□□□□ -1.54
CDH13-203ENST00000431540 CLRN3Q8NCR9 226 aa5.4□□□□□ -1.54
CDH13-203ENST00000431540 OR10G8Q8NGN5 311 aa5.4□□□□□ -1.54
CDH13-203ENST00000431540 BAALCQ8WXS3 180 aa5.4□□□□□ -1.54
CDH13-203ENST00000431540 HIST1H2BAQ96A08 127 aa5.4□□□□□ -1.54
CDH13-203ENST00000431540 SFRP2Q96HF1 295 aa5.4□□□□□ -1.54
CDH13-203ENST00000431540 TCEAL7Q9BRU2 100 aa5.4□□□□□ -1.54
CDH13-203ENST00000431540 C11orf21Q9P2W6 132 aa5.4□□□□□ -1.54
CDH13-203ENST00000431540 IGKV2D-24A0A075B6R9 120 aa5.39□□□□□ -1.55
CDH13-203ENST00000431540 TMEM238LA0A1B0GVL6 79 aa5.39□□□□□ -1.55
CDH13-203ENST00000431540 F6UZH7 168 aa5.39□□□□□ -1.55
CDH13-203ENST00000431540 GCHFRP30047 84 aa5.39□□□□□ -1.55
CDH13-203ENST00000431540 RPL36AP83881 106 aaKnown RBP5.39□□□□□ -1.55
CDH13-203ENST00000431540 WFDC2Q14508 124 aa5.39□□□□□ -1.55
CDH13-203ENST00000431540 MIAQ16674 131 aa5.39□□□□□ -1.55
CDH13-203ENST00000431540 LGALSLQ3ZCW2 172 aaPredicted RBP5.39□□□□□ -1.55
CDH13-203ENST00000431540 LRRC37A5PQ49AS3 106 aa5.39□□□□□ -1.55
CDH13-203ENST00000431540 C9orf163Q8N9P6 203 aa5.39□□□□□ -1.55
CDH13-203ENST00000431540 RPL36ALQ969Q0 106 aaKnown RBP5.39□□□□□ -1.55
CDH13-203ENST00000431540 RAB24Q969Q5 203 aa5.39□□□□□ -1.55
CDH13-203ENST00000431540 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.38□□□□□ -1.55
CDH13-203ENST00000431540 IGKV3D-20A0A0C4DH25 116 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 A0A0D9SG52 128 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 TRBV6-1A0A0K0K1D8 114 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 GAGE12JA6NER3 117 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 UPK1BO75841 260 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 SIX6O95475 246 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 SLPIP03973 132 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 ARL14EPLP0DKL9 152 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 GZMBP10144 247 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 HAMPP81172 84 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 RPL19P84098 196 aaKnown RBP5.38□□□□□ -1.55
CDH13-203ENST00000431540 GAGE1Q13065 139 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 GAGE4Q13068 117 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 GAGE5Q13069 117 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 GAGE13Q4V321 117 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 HSD17B11Q8NBQ5 300 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 RNF185Q96GF1 192 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 C1orf43Q9BWL3 253 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 ACTR3CQ9C0K3 210 aaPredicted RBP5.38□□□□□ -1.55
CDH13-203ENST00000431540 KLK12Q9UKR0 248 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 RPH3ALQ9UNE2 315 aa5.38□□□□□ -1.55
CDH13-203ENST00000431540 IGHV3-73A0A0B4J1V6 119 aa5.37□□□□□ -1.55
CDH13-203ENST00000431540 KRBOX1C9JBD0 128 aa5.37□□□□□ -1.55
CDH13-203ENST00000431540 CXCL1P09341 107 aa5.37□□□□□ -1.55
CDH13-203ENST00000431540 FHITP49789 147 aa5.37□□□□□ -1.55
CDH13-203ENST00000431540 RAB4BP61018 213 aa5.37□□□□□ -1.55
CDH13-203ENST00000431540 RAB2AP61019 212 aa5.37□□□□□ -1.55
CDH13-203ENST00000431540 UBE2D3P61077 147 aa5.37□□□□□ -1.55
CDH13-203ENST00000431540 UBE2D2P62837 147 aa5.37□□□□□ -1.55
CDH13-203ENST00000431540 PRNTQ86SH4 94 aa5.37□□□□□ -1.55
CDH13-203ENST00000431540 OR11H4Q8NGC9 324 aa5.37□□□□□ -1.55
CDH13-203ENST00000431540 OR2T35Q8NGX2 323 aa5.37□□□□□ -1.55
CDH13-203ENST00000431540 TRBV6-8A0A0A6YYG3 113 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 B4DEV8 164 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 SSNA1O43805 119 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 S100A9P06702 114 aaKnown RBP5.36□□□□□ -1.55
CDH13-203ENST00000431540 ARMS2P0C7Q2 107 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 TPT1P13693 172 aaKnown RBP5.36□□□□□ -1.55
CDH13-203ENST00000431540 ATP6V0CP27449 155 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 DEFA1P59665 94 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 DEFA3P59666 94 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 RPL37AP61513 92 aaKnown RBP5.36□□□□□ -1.55
CDH13-203ENST00000431540 GNG5P63218 68 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 CIRBPQ14011 172 aaKnown RBP5.36□□□□□ -1.55
CDH13-203ENST00000431540 ZNF674Q2M3X9 581 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 ZFP82Q8N141 532 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 UBE2WQ96B02 151 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 FMC1Q96HJ9 113 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 AQP10Q96PS8 301 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 SAMD10Q9BYL1 202 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 WFDC1Q9HC57 220 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 PRR34Q9NV39 138 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 PHLDA3Q9Y5J5 127 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 ARL2-SNX15V9GYD0 113 aa5.36□□□□□ -1.55
CDH13-203ENST00000431540 TRAV8-4A0A0B4J246 113 aa5.35□□□□□ -1.55
CDH13-203ENST00000431540 LECT2O14960 151 aa5.35□□□□□ -1.55
CDH13-203ENST00000431540 P01737 135 aa5.35□□□□□ -1.55
CDH13-203ENST00000431540 CRPP02741 224 aa5.35□□□□□ -1.55
CDH13-203ENST00000431540 FAM162BQ5T6X4 162 aa5.35□□□□□ -1.55
CDH13-203ENST00000431540 PRR27Q6MZM9 219 aa5.35□□□□□ -1.55
CDH13-203ENST00000431540 ENHOQ6UWT2 76 aa5.35□□□□□ -1.55
CDH13-203ENST00000431540 C14orf178Q8N769 122 aaPredicted RBP5.35□□□□□ -1.55
CDH13-203ENST00000431540 SGK494Q96LW2 274 aa5.35□□□□□ -1.55
CDH13-203ENST00000431540 SMIM3Q9BZL3 60 aa5.35□□□□□ -1.55
CDH13-203ENST00000431540 VAX2Q9UIW0 290 aa5.35□□□□□ -1.55
CDH13-203ENST00000431540 LRP1Q07954 4544 aaKnown RBP5.35□□□□□ -1.55
CDH13-203ENST00000431540 CTXND1A0A1B0GTU2 59 aa5.34□□□□□ -1.55
CDH13-203ENST00000431540 CNBPP62633 177 aaKnown RBP5.34□□□□□ -1.55
CDH13-203ENST00000431540 SRSF3P84103 164 aaKnown RBP5.34□□□□□ -1.55
CDH13-203ENST00000431540 SDIM1Q6ZPB5 146 aa5.34□□□□□ -1.55
CDH13-203ENST00000431540 ZC2HC1AQ96GY0 325 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms