RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 TRBV24-1A0A075B6N3 115 aa11.75□□□□□ -0.53
TTC28-202ENST00000431039 MUC21A0A0G2JKD1 596 aa11.75□□□□□ -0.53
TTC28-202ENST00000431039 MUC21A0A140T8X8 626 aa11.75□□□□□ -0.53
TTC28-202ENST00000431039 A0A1B0GW15 77 aa11.75□□□□□ -0.53
TTC28-202ENST00000431039 IGLL5B9A064 214 aa11.75□□□□□ -0.53
TTC28-202ENST00000431039 NTF3P20783 257 aa11.75□□□□□ -0.53
TTC28-202ENST00000431039 DMRTA1Q5VZB9 504 aa11.75□□□□□ -0.53
TTC28-202ENST00000431039 RASL10AQ92737 203 aa11.75□□□□□ -0.53
TTC28-202ENST00000431039 NOP10Q9NPE3 64 aaKnown RBP11.75□□□□□ -0.53
TTC28-202ENST00000431039 A0A1B0GXF2 115 aa11.74□□□□□ -0.53
TTC28-202ENST00000431039 M0R381 172 aa11.74□□□□□ -0.53
TTC28-202ENST00000431039 TWIST1Q15672 202 aa11.74□□□□□ -0.53
TTC28-202ENST00000431039 ZNF876PQ49A33 203 aa11.74□□□□□ -0.53
TTC28-202ENST00000431039 RYR1P21817 5038 aa11.74□□□□□ -0.53
TTC28-202ENST00000431039 LYRM9A8MSI8 78 aa11.73□□□□□ -0.53
TTC28-202ENST00000431039 EMP1P54849 157 aa11.73□□□□□ -0.53
TTC28-202ENST00000431039 MRPL54Q6P161 138 aaKnown RBP11.73□□□□□ -0.53
TTC28-202ENST00000431039 RASL11AQ6T310 242 aa11.73□□□□□ -0.53
TTC28-202ENST00000431039 APLNQ9ULZ1 77 aa11.73□□□□□ -0.53
TTC28-202ENST00000431039 TRGV1A0A0A0MS02 117 aa11.72□□□□□ -0.53
TTC28-202ENST00000431039 TGIF2-C20orf24A0A0A6YYL0 155 aa11.72□□□□□ -0.53
TTC28-202ENST00000431039 S100A8P05109 93 aa11.72□□□□□ -0.53
TTC28-202ENST00000431039 SSTP61278 116 aa11.72□□□□□ -0.53
TTC28-202ENST00000431039 HBBP68871 147 aa11.72□□□□□ -0.53
TTC28-202ENST00000431039 LINC00612Q8N6U2 182 aa11.72□□□□□ -0.53
TTC28-202ENST00000431039 MRPL16Q9NX20 251 aaKnown RBP11.72□□□□□ -0.53
TTC28-202ENST00000431039 MSRB1Q9NZV6 116 aa11.72□□□□□ -0.53
TTC28-202ENST00000431039 DYNC1H1Q14204 4646 aaKnown RBP11.72□□□□□ -0.53
TTC28-202ENST00000431039 TEX48A0A1B0GUV7 120 aa11.71□□□□□ -0.53
TTC28-202ENST00000431039 TRGC1P0CF51 173 aa11.71□□□□□ -0.53
TTC28-202ENST00000431039 SPART-AS1P0CW21 52 aa11.71□□□□□ -0.53
TTC28-202ENST00000431039 TCTAP57738 103 aa11.71□□□□□ -0.53
TTC28-202ENST00000431039 COX19Q49B96 90 aa11.71□□□□□ -0.53
TTC28-202ENST00000431039 Q6ZTI0 123 aa11.71□□□□□ -0.53
TTC28-202ENST00000431039 GATD1Q8NB37 220 aa11.71□□□□□ -0.53
TTC28-202ENST00000431039 FAM210BQ96KR6 192 aa11.71□□□□□ -0.53
TTC28-202ENST00000431039 DKK2Q9UBU2 259 aa11.71□□□□□ -0.53
TTC28-202ENST00000431039 PKHD1P08F94 4074 aa11.71□□□□□ -0.54
TTC28-202ENST00000431039 COLCA2A8K830 154 aa11.7□□□□□ -0.54
TTC28-202ENST00000431039 FAM222AQ5U5X8 452 aa11.7□□□□□ -0.54
TTC28-202ENST00000431039 C18orf15Q96N68 181 aa11.7□□□□□ -0.54
TTC28-202ENST00000431039 A8MWV9 139 aa11.69□□□□□ -0.54
TTC28-202ENST00000431039 RS1O15537 224 aa11.69□□□□□ -0.54
TTC28-202ENST00000431039 CAMPP49913 170 aa11.69□□□□□ -0.54
TTC28-202ENST00000431039 SMIM15Q7Z3B0 74 aa11.69□□□□□ -0.54
TTC28-202ENST00000431039 AP1S3Q96PC3 154 aa11.69□□□□□ -0.54
TTC28-202ENST00000431039 TMEM191AQ9H0A3 160 aa11.69□□□□□ -0.54
TTC28-202ENST00000431039 GAGE12BA1L429 117 aa11.68□□□□□ -0.54
TTC28-202ENST00000431039 GAGE7O76087 117 aa11.68□□□□□ -0.54
TTC28-202ENST00000431039 GAGE12FP0CL80 117 aa11.68□□□□□ -0.54
TTC28-202ENST00000431039 GAGE12GP0CL81 117 aa11.68□□□□□ -0.54
TTC28-202ENST00000431039 GAGE12IP0CL82 117 aa11.68□□□□□ -0.54
TTC28-202ENST00000431039 Q6ZTC4 211 aa11.68□□□□□ -0.54
TTC28-202ENST00000431039 JPT2Q9H910 190 aa11.68□□□□□ -0.54
TTC28-202ENST00000431039 KIF25-AS1Q9Y6Z4 181 aa11.68□□□□□ -0.54
TTC28-202ENST00000431039 CRYGDP07320 174 aa11.67□□□□□ -0.54
TTC28-202ENST00000431039 EVI2AP22794 236 aa11.67□□□□□ -0.54
TTC28-202ENST00000431039 CFAP126Q5VTH2 177 aa11.67□□□□□ -0.54
TTC28-202ENST00000431039 TMEM136Q6ZRR5 245 aa11.67□□□□□ -0.54
TTC28-202ENST00000431039 GNB1LQ9BYB4 327 aa11.67□□□□□ -0.54
TTC28-202ENST00000431039 DNAH11Q96DT5 4516 aa11.67□□□□□ -0.54
TTC28-202ENST00000431039 TRGV2A0A075B6R0 118 aa11.66□□□□□ -0.54
TTC28-202ENST00000431039 TRAV4A0A0B4J268 109 aa11.66□□□□□ -0.54
TTC28-202ENST00000431039 CIDEAO60543 219 aa11.66□□□□□ -0.54
TTC28-202ENST00000431039 DEFB130BP0DP73 79 aa11.66□□□□□ -0.54
TTC28-202ENST00000431039 DEFB130AP0DP74 79 aa11.66□□□□□ -0.54
TTC28-202ENST00000431039 UFSP1Q6NVU6 142 aa11.66□□□□□ -0.54
TTC28-202ENST00000431039 C14orf178Q8N769 122 aaPredicted RBP11.66□□□□□ -0.54
TTC28-202ENST00000431039 POM121L12Q8N7R1 296 aa11.66□□□□□ -0.54
TTC28-202ENST00000431039 SAMD10Q9BYL1 202 aa11.66□□□□□ -0.54
TTC28-202ENST00000431039 DPH3P1Q9H4G8 78 aa11.66□□□□□ -0.54
TTC28-202ENST00000431039 CELA1Q9UNI1 258 aa11.66□□□□□ -0.54
TTC28-202ENST00000431039 TRAV10A0A0B4J240 114 aa11.65□□□□□ -0.54
TTC28-202ENST00000431039 RHODO00212 210 aa11.65□□□□□ -0.54
TTC28-202ENST00000431039 MT-ND6P03923 174 aa11.65□□□□□ -0.54
TTC28-202ENST00000431039 SMIM17P0DL12 118 aa11.65□□□□□ -0.54
TTC28-202ENST00000431039 LINC00315P59091 139 aa11.65□□□□□ -0.54
TTC28-202ENST00000431039 DAD1P61803 113 aa11.65□□□□□ -0.54
TTC28-202ENST00000431039 ZFP2Q6ZN57 461 aa11.65□□□□□ -0.54
TTC28-202ENST00000431039 OR4C5Q8NGB2 326 aa11.65□□□□□ -0.54
TTC28-202ENST00000431039 A0A087WWL8 130 aa11.64□□□□□ -0.55
TTC28-202ENST00000431039 HLA-DQA1P01909 254 aa11.64□□□□□ -0.55
TTC28-202ENST00000431039 RAB5AP20339 215 aa11.64□□□□□ -0.55
TTC28-202ENST00000431039 RAB4BP61018 213 aa11.64□□□□□ -0.55
TTC28-202ENST00000431039 FAM104BQ5XKR9 115 aa11.64□□□□□ -0.55
TTC28-202ENST00000431039 PKD1P98161 4303 aa11.64□□□□□ -0.55
TTC28-202ENST00000431039 C12orf74Q32Q52 190 aa11.63□□□□□ -0.55
TTC28-202ENST00000431039 AMN1Q8IY45 258 aa11.63□□□□□ -0.55
TTC28-202ENST00000431039 RNF185Q96GF1 192 aa11.63□□□□□ -0.55
TTC28-202ENST00000431039 RAB4AP20338 218 aa11.62□□□□□ -0.55
TTC28-202ENST00000431039 FRZBQ92765 325 aa11.62□□□□□ -0.55
TTC28-202ENST00000431039 ZNF479Q96JC4 524 aa11.62□□□□□ -0.55
TTC28-202ENST00000431039 MUC4Q99102 2169 aa11.62□□□□□ -0.55
TTC28-202ENST00000431039 APCSP02743 223 aa11.61□□□□□ -0.55
TTC28-202ENST00000431039 RPS10P46783 165 aaKnown RBP11.61□□□□□ -0.55
TTC28-202ENST00000431039 FAM74A4Q5TZK3 123 aa11.61□□□□□ -0.55
TTC28-202ENST00000431039 LINC00336Q6ZUF6 198 aa11.61□□□□□ -0.55
TTC28-202ENST00000431039 TRAPPC1Q9Y5R8 145 aa11.61□□□□□ -0.55
TTC28-202ENST00000431039 ABCA13Q86UQ4 5058 aa11.61□□□□□ -0.55
TTC28-202ENST00000431039 DEFB131BA0A096LNP1 70 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms